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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0037900 |
| Transcript ID | LotjaGi1g1v0037900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock protein, putative; TAIR: AT1G06460.1 alpha-crystallin domain 32.1; Swiss-Prot: sp|Q4UJB1|HSPC4_RICFE Small heat shock protein C4; TrEMBL-Plants: tr|I3SGI4|I3SGI4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0037900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:5277626..5283734) extracted from Lotus japonicus Gifu genome v1.2.
GGAAGTAGTAAATTTTATACATAATAGAAAAACAAACATTTTCAATCATTTTGCACTATTTTATTTTGTTCATAAACATT AAATATATTTACATATTTTTTTATTTAGTTTCAAAAATGAAAAATTGATTGATAATAAAACCACTGTCATAGAGAAGCAG TCTCAAACTGATATTTTGATTCTTCGTCTAGCCCAGTGGCATCTAAATTGTTGTCTTCCTAATGATATTTAGATTCAATG GGCCCCACTTATGTTCTTTTCTGAGCAAATATCTTCCATTCAGTGATGACTTATCCTGCATATATTCTACATCCTCTTGT GCTGTAGTGCCACATCTGTTCTTTTCTGCATTATCTGTTTAGCTCAGGTTTTTGTGTAGAAATGGAGAGTGAGTTGGTAA GACGCAGAATTGACATGATATCAGCGCACTTTGCACCCAGTGATGAGATTTCAACCACCCATGTTCTGCCTTTGGTAATA TATTAATTTCATGCTCTTTTATGTTGTAATGTTTTTCCGTAAAGTTGTGTTTTTTAACAACAGATATTGTGTGTTTTACT TCAATCAAGAGGACAAGGAATAAATCTGTTCCTTGAGAAATTTATGTCAGATTTTCCATATGTTACACTTGCTTTACCTA CTAGGTATCATATCCCTTTAGGGCTATCTTCTCTAATTAGCAGCATGCCACTAATTTTGTTTTTTAGTTTTTGATTTACA ATGTCCAATAAAATAATATCTCTCAGCTATCCATTTTTTTTCATGGATAAATGTATTAGCAATTTATTGTGTTCATCTAT TTTCCTCTCCCTGTCAGAACTGCAGTGGTAGTATGAACTCTGTGCTTTCGAGACGTGATAATAAGGTGTATTTTGCACGC CAAGCATCTGCTTCTTTTGGTTATTTTATGAGGCAGGCTTCAGTTAAAGAGGTACTTACTTTGCACTTTACATTCGATAT AAGGGACAGAACACAATTTTTTTTGTAGATGGAGCGAAAAATTAACTCATTAAGCAAAATCAACATTCAACAATAACTAT TTGAATGAGGCATTATAAAAATGATGAGGGGGGACAAATATAACATTAGAATACTGTTCTATTAAGAAAAAAATTATCTT CAAGGGCGATTGTTGCATTTTTTACATAGCTGGTTCCGACCCTATTCACATTGTTCTTATATGTAATTTTTTTCATAGTC ATTCATTTCTCACTGGCTTATTTAATACTATTAATTTCCAGGGCGACTCAACTACTTTCATTGCTCCTAAAATCCATGGT GGTAAATCTGAAGGGCCTTCTAATTCAAGAGCACCATGTTTTGCTAGACCTGCAAGGACAGAACCAATGACTAAGGTGCA GGGGGGTGATTCTAGTTCAATTGAGCCTCCTAAATTTTCTAGGCCAAGCAAACAGATTGGACAAAGAAACCAGTTAAATT ATAAGAAAAACTCATGCCATCCTGATACTGGTGATTAGCACTTCAAATTCTGCAAGTTATTAGAAGTTATACCTGCTAAG TAGCTAAAAATCAGAAGTAAATTATATGTGACTTTTTTTTGTAGGAACTGTGTGGTCTCCAAGGATGGATGTTGTAGAAT CAGAAGGCAAATATGTTATCGCAGTGGAAGTTCCAGGTGTCAGTATCAATGACATAAGAGTGGAGGTTGATGATCAAAAG TAAGAAGCATATACTATTTATATCCTGATGTTAAAAGTGTAAAATACTATTTGGAATTTATGGTATTCGGTATTCCTTTT CTCATTTACTTTTAACTAATCAATATCAGAAGTGAGGGGTGAAGAATTAGGAAAGGACAATACTGAATAAATATTGCTGC ATTCTACTCTTATCTAAGTGCGTGCCTCGATTTGCACGTTATTCAAATAACTTTTTCTCATAGGTCAAGTGTGTGTTTGG ATCAATGTTGTCAAAACCGATTTTGGGTGGAATTAATTTTAGTAAAATTGATTCTGGTAAAAGTGAGTTGAAGGTGAAGT GATTTATTTTTGAATGTGTATGAGAAAAGTGATTTATGTAGGGCTGTGTTGTGAAATCGTGTTATGAAATCCCACAATTG ATTGTCCACCGCAAAAGCTACGCTCTTTAGCTTCTCCACAGAACTGATTTTGGGACTAGAATCAATTCTCTAAGTCAATT ACCAAACATCAACATAACCACCTAAAAGTGATTTTGGTCCATGAAAATTGATTCTAAAGCTCTCAAACGTGGAACCAAAC ACACACTAAGACTTGTAGTTTCCAACCAGAAGCGATTTCTGAAACTAAACATGCTATAAGTCATTATTAAGTATCACTGT TTTTTTTTTTGTCAAGATTCAAGTTCCACTGTGTTTGAGCTGTTCTTTCATTTGCTTAATGGACATTTCAGTTTTGAACA TTCTTCATCATAATGCCACTACCACTTTTATTTCCTTAATAAGAGAGCCAATATGTGAACTATGGCAGGTTGTGTGTCAA AGGAAGGCGCTCTACTAGCTATTTGAGAGTTGCAGGTTGTCCAAAAACTTCATCATTTTCTTCATATCACAAAAGAGAGA TACTACATGGACCATATGAGGTGGTTTGGTCTCTTCCACCTGGTGTGAACATGGATAATATATCAGCTGAATTTTCGTAA GTTATATTGTTGTGTTATTTAACTGGTTTTTTTTATTATGGCTTCTTTTTAATTGAATTCACAAACTATAATATTAAGAA AAACCTCTATTAACTTGGTCTTTTGCATTTATCTAAGTTTTGGCTTCTGAGCAGTCACAAGATTCATGAATGGTTATGCT ACTAACAATGTTCAAAATTAACATTTTTCCTATTCAGTAGAAGTTATAAAATTAACTTTCTGAAACAACTTTTAAGAGCC TATTGCATTAGTGACTCATGAAATTAAGTTTTGAGCCTATCTTGTAGTGTCACCTCTTCAAATTTTCTAAACTGTTATTA AGATATGTGAAGGTTTCAAGTTTCCTAAATTTACCCAACAAATTCCAGCAAAGGAGAAGTGGAGGGGAAAAGCTATCTAA TTAAGTAATTGTTTAGAAGTGTCTTTAGGAAGAGAAGGTGAAGCAAAGGTTAATGATTTGTTTCAAAACTTCAATTTCTG TAGCTACACAACAAGGACTGGCTTCCCTGCAGTCAGATTTTCTTGAATTCATTAATCAGGATTCCGCAACCGTCTGATTA AAATTGGACGGCTCATATTTACAAAATACGATTTTAGGTTTACAATCATCTATTTGAATTTGAGCCATTTGATTTTAATT CGACAGCTTTTGAGTTCTGACTGCAATAAATTTAGGAAAACTCAACCTCAGGAAATCCAAAACCCACACAACACCTTTCA GCCTTTGTTATCATATGCAATGCATGAACCATATTGGTGATTTGATGTCATGAATTATTTTTTCATTTATACTTTAGTTC CTAATTGAGGGGTAGAGACTTTTATCATCCATTTCCTTATACATCCCTTTAAGGCATCAAGGGTCTGTTTTTCCTCTTCC CTTGCCCTCTATTCCAATACAAAAAGAACTAAATGGAACTGTTTTTGTGTAACTAGTTCTTTTTGTATTTGATTCAATCA AGTTCTACGATTTCTTGTCCTTTTATTTTATACCCAGATGCAAGCAGGGGTTGGAACTTGAAAGTGGCTTGAATAAGTTA AAGGAGTTGGTTTAATGGTGAACTATGAGTTTATGATCTGTATTGCATACTTGTGTTGTAATTGTACCTCTAATCATGTA AAACTGATGATTTGATTTGTTTCTTTTTCCATTTTCAGGGATGGATTTCTACAAATTATAGTTCCTAAAGTTTCAGTATG AATAAGCAATATTAGTAATAGACTTATAGCATATTATGTATACGTACCCCATGCATTTGCCATAGATGTAGCAGAAATGT CCATTGTTCCTTCTGTGTAAGCTACGTCCTGTCCTATATATAATGTAATGGACAAATGATGGGGGTTAGTTTTGATATCA TGCACAACTATAATGTTGAACAAAATTGTACATGCATAGTGATTCGTGACATACACTCATGTCTCGATCCCCTTTCAAAA GCTATAAATGGATGAAAAATGATTCCTGAACCACTATACAGTAGAAACACCCCTAAACACCCATTTTCCTGCGGATTTTG CTTCGGATCTCTAATTTAGGAATTTCAATTTTACACGGTTCTGTGCTTTATGGTTACTCATGTGTATTTAGGTGGTTAGT TCAGTGTATTATTTGGCCAAATCCCTAATTTAGGAATTTCAATTTTACACGGCGGTTATTTAACCGCCGCAAAATCATTA CCTGCGAAAATTCGTTCGAAAATAGTACTTTCCTGCGGATTTTCTTACAAATTTTACCTTCAAATTTTTCCGATGCAAAA TCCGTAGGAAAAAGGGGTGTTTAGGGGTGTTTCTACTGTATAGTGGTTCAAGAATCATTACTGATAAATGGATTAAGAAT AAATTAAGAGCAATGCTCCGCTTAAAGATGAAAAATGTAACTAGACTTTTTTTTTTCTTACAAAGATGAACGTTTACCTT TCCTTCAATTGGACCAAGCCCAAACTAGGTACAAGTCTTAGCCTATAGTGTCACTAATCTTTTGTTATGAATGACTCATA ATAGGATGGGTCACTCAAAGAGTGAATCACCATTTTGGTCCCTAAGAAAGTATGCGCCGGTCATAGTAGTCCCTAAAAAT TATTAATGGTGAAAAAAATTCCTGAAAGTGTTGATGTCGGTCATAGTAGTCCCTATCTATGTTTGGTCGTTAGTCCCTGG GACGGAAAAGTGACCTGGTCACTTAAATTGACACATGCTGATCCACGTGGCAGCCATGTAATATATAATAATAATAAATA TTAAAAAAAAACTCTAACCCTAAATTACTCTTCATCATCTCACTGTCTTCATCATCTCATCAACACCACACTAGAACCAA CATGAATCAGCACCACCATCTCCCTTCGCCGTCAAGCCCGATCATTCCACCATCGCTTCCCCTCCATCTAGATCGCACCA CCACCGTATCTCCCCTCCTCTTGGATCACGCCGCGCAGCCACTACCTCTCCCTGGCCTAATCGCGCCGCCACCTTCATCA CCACGACCTTAATCGCGCTCAGCCACCCCCTCTCTTCCCAAATCAATCCCCTTCACCACCGATATGAAGCTTTTCTCACC AAACATTGAAAACCCAACAGATCAGGTGCGACACTCTGATTTCATCACATCGGTTTCCTCTTCATGAAATCGACTAGGAG GTGAGATCCAGTAAGGATTTCGACCCAGCGGCATGATGTATCGGATCTGGTACAGGTGCAAGCTTGTTGGTTTCTGGGGA TTTATGGGCTTTTTGAAGTTGTTGGTTGTTGAAGGTCTGCTCCTCCTTTCTTTGGATCTGGTACAGAAGAAAGAGCACGA TTTGAAGAGAGGGTTAGGGTTTGTTCTTTGGTTCTAGTACAGAAGAAATACCCAGAAGTGAATCTTTTCTCCTTCTGCGG TTTGGATCTCCATTTTCTGCTAAAGTTTGGAACTTTGGAACTCTGAATATGGATTGCTCTTGGTGTTTTTTGTCTCCGTG CTGCGTTAAGCTCTTTGAAGTTAACTTTGACAAGGGGGCTACTTGGGCATATGAGTTTGGCTCACAATCAATGGTTTGAG GATCTTAATCCTCCTTGTCAGATGCTAGTGGAGGTAGTGACTGATGGTTTATAAAATTTTAAAATTGTTTGTCCTTAATA TATTTTCATGATAAATATTTAATTTGTTTGTTTGGTTACTCTTGACATATGCTTTGTGAGTAACGAGGTTTCTTTCTGGA AATGGGTTTAGTTTTTGTTATATGGTGGGTGCATTTTTATGGGTTATGAAGATGGATGATAGTGCAATTGGGGTTTCATC TTGTGTTCAATTCTGGTTTGGATTTGAGATGAAAATTTCATCTGGGTTTGGGTTTTGTGTTTCACGTTGAAAGATCTTGC TCTTTCATGGACAAGAATATCATGAAAGCATTCAAAGTTTCATCTTTAAATAATGCATACATGTTAATAAGGGAACTTTC AACAAATGGATAATCTTTAAATCTCGCTT
CDS sequence (LotjaGi1g1v0037900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGTGAGTTGGTAAGACGCAGAATTGACATGATATCAGCGCACTTTGCACCCAGTGATGAGATTTCAACCACCCA TGTTCTGCCTTTGAACTGCAGTGGTAGTATGAACTCTGTGCTTTCGAGACGTGATAATAAGGTGTATTTTGCACGCCAAG CATCTGCTTCTTTTGGTTATTTTATGAGGCAGGCTTCAGTTAAAGAGGGCGACTCAACTACTTTCATTGCTCCTAAAATC CATGGTGGTAAATCTGAAGGGCCTTCTAATTCAAGAGCACCATGTTTTGCTAGACCTGCAAGGACAGAACCAATGACTAA GGTGCAGGGGGGTGATTCTAGTTCAATTGAGCCTCCTAAATTTTCTAGGCCAAGCAAACAGATTGGACAAAGAAACCAGT TAAATTATAAGAAAAACTCATGCCATCCTGATACTGGAACTGTGTGGTCTCCAAGGATGGATGTTGTAGAATCAGAAGGC AAATATGTTATCGCAGTGGAAGTTCCAGGTGTCAGTATCAATGACATAAGAGTGGAGGTTGATGATCAAAAGTTGTGTGT CAAAGGAAGGCGCTCTACTAGCTATTTGAGAGTTGCAGGTTGTCCAAAAACTTCATCATTTTCTTCATATCACAAAAGAG AGATACTACATGGACCATATGAGGTGGTTTGGTCTCTTCCACCTGGTGTGAACATGGATAATATATCAGCTGAATTTTCG GATGGATTTCTACAAATTATAGTTCCTAAAGTTTCAGTATGA
Protein sequence (LotjaGi1g1v0037900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESELVRRRIDMISAHFAPSDEISTTHVLPLNCSGSMNSVLSRRDNKVYFARQASASFGYFMRQASVKEGDSTTFIAPKI HGGKSEGPSNSRAPCFARPARTEPMTKVQGGDSSSIEPPKFSRPSKQIGQRNQLNYKKNSCHPDTGTVWSPRMDVVESEG KYVIAVEVPGVSINDIRVEVDDQKLCVKGRRSTSYLRVAGCPKTSSFSSYHKREILHGPYEVVWSLPPGVNMDNISAEFS DGFLQIIVPKVSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 102 | 143 | 42 | - | – | |
| MobiDBLite | 107 | 143 | 37 | - | – | |
| PANTHER | 109 | 250 | 142 | 1.1E-39 | – | |
| PANTHER | 109 | 250 | 142 | 1.1E-39 | – | |
| Gene3D | 121 | 253 | 133 | 2.1E-25 | ||
| SUPERFAMILY | 143 | 251 | 109 | 8.79E-23 | ||
| ProSiteProfiles | 144 | 253 | 110 | 21.425 | ||
| CDD | 154 | 250 | 97 | 8.40332E-24 | – | |
| Pfam | 154 | 251 | 98 | 1.7E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0037900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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