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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0045700 |
| Transcript ID | LotjaGi1g1v0045700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, putative isoform 2; TAIR: AT1G06660.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit; Swiss-Prot: sp|F4IDQ5|JASON_ARATH Protein JASON; TrEMBL-Plants: tr|A0A151QXA3|A0A151QXA3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0045700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:6229418..6233018) extracted from Lotus japonicus Gifu genome v1.2.
ACAACTAATTTCAAATTTCGAAATCGATCGTTCTTCACTGTGTACGTTAAGTCTTTCTCTGATTCTAATTCATTCCATTG TTTTCATTTCCAATCGAATTTCAAGGTTTAAAGAGTGTGAGTTTCAGAAGAAGAAGAAGAAGATTGTGATTCTGAATCTG AATTCGCTGTTGTGGATGAATGAAGCGTAGCTTGAGGTTTCTGCTACGGCTCTTGATCCAATCCTTCTCTGCAATCATGG GCTGTTTCTTCGCTTGCTTCAGGATCAGAGAAGTTCTTCCCACAATCTCCGCTCGTTCCAATTCCACCGTAACATTTCTC TCTCTTTTCCATCTCGTTTCTTTCTCGCAAGAATTGTCAATACCTAGGGTTTGCCAATTTGTTCAAATTCAAGCTGAATT TGAGTTACGCGCAACGAACTAGATCGTAAAATGTAGTTTTCTTTATAGGAACATTGCATGATTTGATTAGTTTTCATTTT ATAATTATGATTATCATGGTGATGATGATGAATTGGTGGTGGTGGTGGTGATCATGATTTTCTGTGTGTGAATCAGGATG TTCTGATTTCGCGAAATCGATTGACATCTTTGTCGTCGAAAGGTATTTTTATTCCTTTCTGTTACTCCTTTTCTTTTTCC TGGTTTTAATTTTCTGAAGTTTAACTGATTTTGTGTTTTAAATTTTTCGAAAGAGAGGGGAGATTCGGCGCGGAATGGTG TGGGGTCTCAGCGAGATGACATAGGTCTCAAGGATGAGGTGTGTTCATTGTAGCTGTAGTTCTGTTTTAATGGCTTTTTC TTACATGTTTATAGCATTTTGGTTCCACTGTGAAATATCCTAGAATCAATTTTGGTTGGAAGTTGCAAGTCTTGAAAATC TCCTGTACAAATAGTGAAACCAAACATGCAGTTAGTTGTTTCAATTGTCTAGTTTTAGATTGTACTACTCAGGTGCATTG AGTGAAAAGAAAAAATGTTCAGTTTTTTGCTTGTGAATTCACTTCAACTTGGATAAATTTATCTGCAATCTGATAAATTC TTCTTGTACTGGAGTGAATTGTAAATTTGGAGTTTATACAATTGAGAATGAAAACAAATTTAGGGGAGCTAGCTCAAGTA ATTTTGTAAACCATTGGTGCATTGTTTTTCAAGTATCTGTGAATGACATCTGACAATTTTTTAGTTTTTCTTCTTTCATT CTAGTTGAGTTGGTTGGATTTATTTTTGTAAATGGTGTTCTGTTTACCTGATTACATGTAAAATCTTTCTGCAGGCCAAG TTTCTTAAAGCTTGTGGCGCCTTACCAGGAACACCTGTTGAAATTCGTAAAGCATCTGAGAAACTAAAAGTGTCCCCCTC TTGTGATAAAGATTCTGACTCTCCGAAGTTTCATTCTTGGCTTCCTACCACATCTGTGGAGAAACTTCAGCTGGATGTCC AACCATTTGAGCCTCAAACTCCCATTAAACTTTGCCAAGAATGGGGAAATAGCGAGGATACTTTCGAGCACACACCAAGA ACTAACAGGTTATTCATGACTTTGAATTGAATTTGTTTCAGTGCTGATATTGAATGATAATGAATATGAACAAAGGACAT TCTCATACTAGATGAATCCACCATCATTTACTCTCAACTTTAAAAGTCACCTTTTGATGACATTTTCAATAGCTAGGCCG TTCTGTTCCAAACAACTGCATCTGTTCACTCAGAAAACATCTTCCCCTTTCAAAAATAGTCCCTTCACAGTTCACATGGA CCTGGTCTTTGCTTTTTGATTTTGAAATTATTGAATCAGATGTGTCTTGTGTCAGTATTTGAATTTCCCTGAATGGTTGG GATGTATATGTATCAGTATTTGAATTTAACTGAATATCATGTGCCAGTATTTTGTTAGAACTTGTCGATTTTGAGAAATT TCATACAAGTGACAGAAATAGAACCTGTTCTGATGTTAACTTTTTTTTTTTGAAGTTGATGTTAACTTAATTTATTCTGC AGTTGCATTACCAATGCACATGACACTCTTGATTATATGCAAGGAAGTTGGGAAGGCAGCCTTCTTACTGAAAAGAAGGC AGCTTCAGTTACTCCCTGGCCAGGCACAGAAACTGAGAGGAAGAATAAATCTGTGCGTTTTGAATGCGTATCTTCAGATG ATGGTGATGTGAAGAAAATCAAGTCACCAAATAACCAAAGTGCATGTAAACCATCACCTTATCCTACCCCATTGAAGTTA TTTGACGAGATGCAAACACCTGGAACCGTGTACCCAGCATCACTAGAAAAGTCTCGTGATTGTAAGCATCGAGTTCGGTC CCAGTTTGTCTATTCAAATGACAACCCAAGTGAGAATGTCTTCCTGTCCAAGATACTTGAAGAGAAAGATCTTAACACTG AACAAGATTCAAGTGAGCTGAGTGATTATGTAAAGCAAGCTCAAAGTGCAACCCCTACCCCAGAAAAAGGGTTGAAGAAA TTTGCAAATGAAAATGAATCTGTGATGGAAGCTAGCTTATCTTCTTGGTTAAGGCCTGCATCAGTCATTATGGAAGATAA ACTGGTTGGAGTGGTTGCTGCTCATGGTAATGAAGATGAGGATTCTCATATTTCTCATCCAAAGTGGTGGGATGGCAATG GCATACCAAATTCAACCACCAAGTACAAGGAGGTATATGAGTTGTAAATTGTAATCATTATCTGCTATTTGAAAGAGTTC TAAATCTGGATACTATATCTAATTAGTGTTGATTGTTTTCAGGACCAGAAAGTAATGTGGCATGCAACACCCTTTGAAGA GAGGTTGAATAAGGCATTGGTGGAGGGAAATGTTATCTCTCAAAGGTATCCCTTATTAACAATTGCTTATTCTACCTTCA CCTGTTGAAAAGCGCATAAAGAAGAAGAGGAAAATATAGAAACAGTTTCTATATACTGACCACTCCACTTAGGGCTTGCT ATGCTTTCCTCAAATATTATGTGCCAAATGTTGATCATGAATGTATGTGTAATTTTCTTTTAATTTGTTATTTGTTCTTA CAGGAAACTTGTTTGTGGAAAGCCAGTGGCATTTGAGGAGATTGATGAAAGTGATACTGCATTATAACAGCAACAACAAT CTTTGACTCATACACAATCTGTGGGATCGTTTTGATATGTCTGCTGGTTCATCCCATTGTGCTTTGTCTTGATATGGAAG CTGATTATACAAATTGTGTTGACATAGAACTTTCGTTTACTGGAAAATTGAGGGAAATGAATGGTTTGAATAGGAACGGT AGGAAGATTTTGGGGGCAGACAACTCAGCACAATTCTATTCAACCAGGTTATCTTTCATGAGCTCATCTCTGCTCATCAT ACAGTGAACAATCTGAGATTTGATAGTGTAAAAACAAATGAATTTTGGCAATTTTTCTTTTTTGCCTATTTTAACCAAAT TAACCCGGTAAGAAAAATTGGCGAGTTATTCAGTGTTTCTTTTTAATATGTTGGCTTATTTTAATTATAAAAATAGTTAT AAAAGATTGTTACCCTGGGCCTTCTCATTCTTTCTCAAGGTTTGACGTAGATTATCTTACTATTCCCAAGGAAAATATTT C
CDS sequence (LotjaGi1g1v0045700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCGTAGCTTGAGGTTTCTGCTACGGCTCTTGATCCAATCCTTCTCTGCAATCATGGGCTGTTTCTTCGCTTGCTT CAGGATCAGAGAAGTTCTTCCCACAATCTCCGCTCGTTCCAATTCCACCGATGTTCTGATTTCGCGAAATCGATTGACAT CTTTGTCGTCGAAAGAGAGGGGAGATTCGGCGCGGAATGGTGTGGGGTCTCAGCGAGATGACATAGGTCTCAAGGATGAG GCCAAGTTTCTTAAAGCTTGTGGCGCCTTACCAGGAACACCTGTTGAAATTCGTAAAGCATCTGAGAAACTAAAAGTGTC CCCCTCTTGTGATAAAGATTCTGACTCTCCGAAGTTTCATTCTTGGCTTCCTACCACATCTGTGGAGAAACTTCAGCTGG ATGTCCAACCATTTGAGCCTCAAACTCCCATTAAACTTTGCCAAGAATGGGGAAATAGCGAGGATACTTTCGAGCACACA CCAAGAACTAACAGTTGCATTACCAATGCACATGACACTCTTGATTATATGCAAGGAAGTTGGGAAGGCAGCCTTCTTAC TGAAAAGAAGGCAGCTTCAGTTACTCCCTGGCCAGGCACAGAAACTGAGAGGAAGAATAAATCTGTGCGTTTTGAATGCG TATCTTCAGATGATGGTGATGTGAAGAAAATCAAGTCACCAAATAACCAAAGTGCATGTAAACCATCACCTTATCCTACC CCATTGAAGTTATTTGACGAGATGCAAACACCTGGAACCGTGTACCCAGCATCACTAGAAAAGTCTCGTGATTGTAAGCA TCGAGTTCGGTCCCAGTTTGTCTATTCAAATGACAACCCAAGTGAGAATGTCTTCCTGTCCAAGATACTTGAAGAGAAAG ATCTTAACACTGAACAAGATTCAAGTGAGCTGAGTGATTATGTAAAGCAAGCTCAAAGTGCAACCCCTACCCCAGAAAAA GGGTTGAAGAAATTTGCAAATGAAAATGAATCTGTGATGGAAGCTAGCTTATCTTCTTGGTTAAGGCCTGCATCAGTCAT TATGGAAGATAAACTGGTTGGAGTGGTTGCTGCTCATGGTAATGAAGATGAGGATTCTCATATTTCTCATCCAAAGTGGT GGGATGGCAATGGCATACCAAATTCAACCACCAAGTACAAGGAGGACCAGAAAGTAATGTGGCATGCAACACCCTTTGAA GAGAGGTTGAATAAGGCATTGGTGGAGGGAAATGTTATCTCTCAAAGGAAACTTGTTTGTGGAAAGCCAGTGGCATTTGA GGAGATTGATGAAAGTGATACTGCATTATAA
Protein sequence (LotjaGi1g1v0045700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKRSLRFLLRLLIQSFSAIMGCFFACFRIREVLPTISARSNSTDVLISRNRLTSLSSKERGDSARNGVGSQRDDIGLKDE AKFLKACGALPGTPVEIRKASEKLKVSPSCDKDSDSPKFHSWLPTTSVEKLQLDVQPFEPQTPIKLCQEWGNSEDTFEHT PRTNSCITNAHDTLDYMQGSWEGSLLTEKKAASVTPWPGTETERKNKSVRFECVSSDDGDVKKIKSPNNQSACKPSPYPT PLKLFDEMQTPGTVYPASLEKSRDCKHRVRSQFVYSNDNPSENVFLSKILEEKDLNTEQDSSELSDYVKQAQSATPTPEK GLKKFANENESVMEASLSSWLRPASVIMEDKLVGVVAAHGNEDEDSHISHPKWWDGNGIPNSTTKYKEDQKVMWHATPFE ERLNKALVEGNVISQRKLVCGKPVAFEEIDESDTAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 12 | 12 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| ProSiteProfiles | 1 | 22 | 22 | 7.0 | – | |
| Phobius | 7 | 30 | 24 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| PANTHER | 12 | 434 | 423 | 3.3E-181 | – | |
| PANTHER | 12 | 434 | 423 | 3.3E-181 | ||
| Phobius | 31 | 436 | 406 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Male meiosis II | A cell cycle process comprising the steps by which a cell progresses through male meiosis II, the second meiotic division in the male germline. |
Expression pattern of LotjaGi1g1v0045700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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