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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0047200 |
| Transcript ID | LotjaGi1g1v0047200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DETOXIFICATION; TAIR: AT3G59030.1 MATE efflux family protein; Swiss-Prot: sp|Q9LYT3|DTX41_ARATH Protein DETOXIFICATION 41; TrEMBL-Plants: tr|A0A151U1Z5|A0A151U1Z5_CAJCA Protein DETOXIFICATION; Found in the gene: LotjaGi1g1v0047200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:6406876..6410695) extracted from Lotus japonicus Gifu genome v1.2.
CTACAACCAAATATACAATATAGCAGCAGTTATAAAATCTACTTGTAGTGAGCTAGTTGTTACTTGTGAGGGACATTAAC CATGGGCTCTGTGGAGGACCAACCTTTGCTTGAGTCAAACACACAACTTGCAAATTTGTCATCACAAGCCATTGAAGAGT TCTTGGAAACTGGGCCAGTTGGGTTGCGATGGTGGCCTAAGCTTGTTGCATGGGAGTCAAGGCTCCTCTGGCTCCTCTCT GGCTCTTCAATAATTATGTCCATTTTCAGTTATATGCCTGGCTTTGTGACCTTGATGTTTGCTGGGCATTTAGGGTCTGT TGAGCTTGCTGGTGCATCAGTAGCTAGTGTTGGAATTCAAGGTCTTGCTTATGGTATTATGGTATGCATTTTTCTTTATC TGCTCATAGAATTAACATCTAAAAGTTAGCTTCTGACACAGCTTTCCTAAAGTTGCAATGCCACTTCATGAGCATTACTA ATGACAATGTGTGTGGTATAAGCATAATGATTTTAGTGCATGTTTTTGAAACCCTGTACAATCGACTCTGGAGCCATAAT CTATTCTGGTAGAAGCTTCTTTGAGTAGTTTCAAGGTTTTAGAATTGATTCTGATAAAAGAAAAGTTGATCCGAAAATTG TCATCCGGTCACGATTGCAGTTACATTACAATCTTTAAAATTGAGGAAAATTATGAATAAATGTGGTTATCCAGAACAAT TGAAGTCGCCAATATAGTTGCAGAGGTTTAAAAAACTTGATATTGTGACTGTAATTGAAGTTGCAGACATTAGTATAAAA TCATGATTAGTATTCAGTTTGTTATAATATATCCTCATTTTTAATTAAAGCTAGATATTATTGACAATAGAGTGGTTGGT TTACATACTCTATTCCCCTTAAGCAAGGTTTCGGCTTCGAGTCTTGTGTGTGGAAAAAAAGCTCACTAGAAGAGCTAGCC CCACCATAATCTCTCGTCTAAAAGAGAATTGTCTTTTGTGGACGATATTTGTGTTTGAAAATAAAACTAGTTATGATTGA AGCTAGAGAGTTGTTGTGTACATCTTTCATTGAATTTTTGTTTACTTAACTATAATTTCATTCATATGATTTATCCATAT TTGTGATTGTTACATTTTTTCTTAAACAGCTTGGAATGGCAAGTGCTGTGCAAACTGTGTGTGGGCAAGCATATGGGGCC AAAAAATATGCAGCAATGGGTGTGATATTGCAAAGAGCAATCATATTACACCTTGGTGCAGCAGTGCTTCTCACATTCCT CTATTGGTTTTCTGGATCTTTTCTATTAGCAATAGGACAGACAGAGAGCATAGCCAAGAGTGGCCAAATTTTTGCCAGGG GACTTATTCTTCAAATATATGCATTTTCACTCAGCTGCCCAATGCAGAGATTCCTCCAAGCACAGAACATAGTGAATCCT CTGGCATATATGGCTGTTGGGGTGTTCCTGCTGCATGTGCTTCTCAGCTGGATAATTGTCTATGTTTTGGGCTATGGCCT TCTTGGTGCAGCCCTTACTCTCAGCTTTTCTTGGTGGCTTCTTGTCATCATAAATGCGCTGTACATCCTTCTTAGCCCAA AATGCAAGCAAACTTGGACTGGCTTCTCACTAAAAGCCTTCACAGGAATTTGGCCTTATTTCAAGCTCACAGTTTCTTCT GCTGTGATGTTATGGTATGACTATATTCAGATTCTGGAATCAGCTTATTTTTCGTTGTAATCAATTCTAGCACACAGAAG CTACCCACATGAGCTTCTCACCTTAATTGATTCTGCCTTTAGATCAGTAATAGAAACATTTTCCGAACATGCACTATGTC TATGGTAAATTTTGTTAGCAATATAATACAAAATCATCCATGTGTCTTCACCCAATAGCTTATGTTTTTGAGATAGTTTG TTTTTGATATGATATCTGAGCCTTTATGGTGAAGTGGTCTAAAGCTTGATCCTTGTTGCTCCCAGTATTCTAACAAAAAA GAAAAAAGTTGAGTTTCATTACAATTTACAAGGTAGAAGGGTTTGTTTATTATTCACACTTCAAGTCAGGAAACATGTTA AAAATATAATATAAATCATTAATTTTTCTAAGCTTTAGGATTTCACTCGGTGACACACACACAAACATTACTATCTTCAA AATGTTTTTCTTAAGTTCACATCAATTCGTTTTAGTAGTCTGAAAATTTATTTAATGCAGTTTGGAGATATGGTACAATC AGGGACTAGTGCTTATATCAGGCTTGCTCTCCAATCCTACAATAGCACTGGATTCTATTTCCATTTGGTATGTTAACAAT TTCTCTTAGAATGATCTTTCTTATTATTTTCCAACTTTTTGTCTAACCATGATCTTCATCCTAATGCACTTTCAGTATGA ATTACTTGAACTGGGACATACAATTCATGTTAGGACTCAGTCAAGCAGCAAGGTCAGGGAAGAAACAAGGTTTTTTCAAT TAAACAACTTGTACACAAACATGTTAAAGATCTAGGTTTCCATGATTGCAGTGTCAGAGTTAGCAATGAATTAGGAGCAG CTCATCCAAGAGTGGCAAGGTTTTCTGTCTTCGTAGTGACTGGAACAAGCTTCCTCATTAGCATAGCTTTCAGCGCGTTT GTTTTGATATTTCGGGTTCCTATGAGCAAGCTTTTCACTTCTGACTCTGAAGTCATTGAAGCTGTAACTGATTTGACTCC ATTGCTTGCCATCTCAGTTCTCCTGAATGGCATTCAACCTATATTATCAGGTAACAAAGTTATAAGCTTCAGCACAAGTT TTTGTTTGTCCTGATCTATGATCTTGTTTGCATTTTGTCTTGAACAATCTATCCCAAAACTTTACTTGGTCATAAATGAC CTGGTACCAAGTTCTAACCGACTATCCAAAAATCTTAAAGTGTTAGGGCAAGACAGGTGAATTATTTTATATTATATTCC TAACATGTTTCCTTGGAAAATTTCAGGGGTTGCAATTGGAAGTGGATGGCAAGGAATAGTGGCTTATGTGAACTTGTGTT CTTACTATGTAATTGGTCTTACTGTTGGATGTGTTCTTGGCTTCAAAACTTCTTTAGGAGTAGCTGTAAGTTTGAAACAT TTCCCTTACTGATTTAGTACATATTGTTTGGAATCATTCTAATATTTAATTGATTCTAAAATCAAAATCAATTCGGGGAT AAGCTAATGTGAGTAGCTTCTTGGTGTTATAATTGATTATGAGGAAAGAGAAGTTGATGCTATATTTTAAGGTCTTAGAT TTGTTTAAAAATTGGTTTCATGCAATGCATTTGGTACCTTTATAGGGAATCTGGTGGGGAATGATCCTTGGAGTTTTGAT ACAGACAGTAACATTAATAATTCTAACTGCCAGAACAAATTGGGAAGCAGAGGTAATCTAGACACTATAAGATCTTATAT ATTTTATGTTGTATGAATTATTTGTCACATATTGTGAACCAAATTATGATGATGTTGTAGGTTGGAAAAGCTATTGTTCG CCTCAAGAGATCTGCTGAAGATGAAACCTTAGAACAACTGGTTGCAGACGTATAGAGATTTTTCTCTCTTCTTGTCTTCT TCTTCAGGCTTAGAACAACATCTTAGTTGCAGATTAGTCTTGTTTAGGGCTAAGCGACTTTGATGATGTATTCCTTCTCT CTGTCAGTTCACAGAATTTTGAGAACAAAATAATTAAGCCTAATTTTTAATTCCAGCATAAAGTATGTGAGGCATTATTT TTCAAACCGTGAATTATTGTAAGTCAATTCCAAAATCAAGTTCACCAGTGCAATTAAAAT
CDS sequence (LotjaGi1g1v0047200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCTCTGTGGAGGACCAACCTTTGCTTGAGTCAAACACACAACTTGCAAATTTGTCATCACAAGCCATTGAAGAGTT CTTGGAAACTGGGCCAGTTGGGTTGCGATGGTGGCCTAAGCTTGTTGCATGGGAGTCAAGGCTCCTCTGGCTCCTCTCTG GCTCTTCAATAATTATGTCCATTTTCAGTTATATGCCTGGCTTTGTGACCTTGATGTTTGCTGGGCATTTAGGGTCTGTT GAGCTTGCTGGTGCATCAGTAGCTAGTGTTGGAATTCAAGGTCTTGCTTATGGTATTATGCTTGGAATGGCAAGTGCTGT GCAAACTGTGTGTGGGCAAGCATATGGGGCCAAAAAATATGCAGCAATGGGTGTGATATTGCAAAGAGCAATCATATTAC ACCTTGGTGCAGCAGTGCTTCTCACATTCCTCTATTGGTTTTCTGGATCTTTTCTATTAGCAATAGGACAGACAGAGAGC ATAGCCAAGAGTGGCCAAATTTTTGCCAGGGGACTTATTCTTCAAATATATGCATTTTCACTCAGCTGCCCAATGCAGAG ATTCCTCCAAGCACAGAACATAGTGAATCCTCTGGCATATATGGCTGTTGGGGTGTTCCTGCTGCATGTGCTTCTCAGCT GGATAATTGTCTATGTTTTGGGCTATGGCCTTCTTGGTGCAGCCCTTACTCTCAGCTTTTCTTGGTGGCTTCTTGTCATC ATAAATGCGCTGTACATCCTTCTTAGCCCAAAATGCAAGCAAACTTGGACTGGCTTCTCACTAAAAGCCTTCACAGGAAT TTGGCCTTATTTCAAGCTCACAGTTTCTTCTGCTGTGATGTTATGTTTGGAGATATGGTACAATCAGGGACTAGTGCTTA TATCAGGCTTGCTCTCCAATCCTACAATAGCACTGGATTCTATTTCCATTTGTATGAATTACTTGAACTGGGACATACAA TTCATGTTAGGACTCAGTCAAGCAGCAAGTGTCAGAGTTAGCAATGAATTAGGAGCAGCTCATCCAAGAGTGGCAAGGTT TTCTGTCTTCGTAGTGACTGGAACAAGCTTCCTCATTAGCATAGCTTTCAGCGCGTTTGTTTTGATATTTCGGGTTCCTA TGAGCAAGCTTTTCACTTCTGACTCTGAAGTCATTGAAGCTGTAACTGATTTGACTCCATTGCTTGCCATCTCAGTTCTC CTGAATGGCATTCAACCTATATTATCAGGGGTTGCAATTGGAAGTGGATGGCAAGGAATAGTGGCTTATGTGAACTTGTG TTCTTACTATGTAATTGGTCTTACTGTTGGATGTGTTCTTGGCTTCAAAACTTCTTTAGGAGTAGCTGGAATCTGGTGGG GAATGATCCTTGGAGTTTTGATACAGACAGTAACATTAATAATTCTAACTGCCAGAACAAATTGGGAAGCAGAGGTTGGA AAAGCTATTGTTCGCCTCAAGAGATCTGCTGAAGATGAAACCTTAGAACAACTGGTTGCAGACGTATAG
Protein sequence (LotjaGi1g1v0047200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSVEDQPLLESNTQLANLSSQAIEEFLETGPVGLRWWPKLVAWESRLLWLLSGSSIIMSIFSYMPGFVTLMFAGHLGSV ELAGASVASVGIQGLAYGIMLGMASAVQTVCGQAYGAKKYAAMGVILQRAIILHLGAAVLLTFLYWFSGSFLLAIGQTES IAKSGQIFARGLILQIYAFSLSCPMQRFLQAQNIVNPLAYMAVGVFLLHVLLSWIIVYVLGYGLLGAALTLSFSWWLLVI INALYILLSPKCKQTWTGFSLKAFTGIWPYFKLTVSSAVMLCLEIWYNQGLVLISGLLSNPTIALDSISICMNYLNWDIQ FMLGLSQAASVRVSNELGAAHPRVARFSVFVVTGTSFLISIAFSAFVLIFRVPMSKLFTSDSEVIEAVTDLTPLLAISVL LNGIQPILSGVAIGSGWQGIVAYVNLCSYYVIGLTVGCVLGFKTSLGVAGIWWGMILGVLIQTVTLIILTARTNWEAEVG KAIVRLKRSAEDETLEQLVADV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 47 | 47 | - | – | |
| PANTHER | 9 | 496 | 488 | 1.8E-270 | – | |
| PANTHER | 9 | 496 | 488 | 1.8E-270 | – | |
| CDD | 45 | 481 | 437 | 1.47214E-155 | – | |
| Phobius | 48 | 74 | 27 | - | – | |
| TMHMM | 48 | 70 | 23 | - | – | |
| Pfam | 56 | 215 | 160 | 1.3E-26 | ||
| TIGRFAM | 59 | 452 | 394 | 6.2E-73 | ||
| Phobius | 75 | 93 | 19 | - | – | |
| TMHMM | 90 | 112 | 23 | - | – | |
| Phobius | 94 | 115 | 22 | - | – | |
| Phobius | 116 | 126 | 11 | - | – | |
| TMHMM | 125 | 147 | 23 | - | – | |
| Phobius | 127 | 147 | 21 | - | – | |
| Phobius | 148 | 166 | 19 | - | – | |
| TMHMM | 167 | 189 | 23 | - | – | |
| Phobius | 167 | 186 | 20 | - | – | |
| Phobius | 187 | 197 | 11 | - | – | |
| TMHMM | 194 | 216 | 23 | - | – | |
| Phobius | 198 | 221 | 24 | - | – | |
| Phobius | 222 | 226 | 5 | - | – | |
| TMHMM | 226 | 248 | 23 | - | – | |
| Phobius | 227 | 248 | 22 | - | – | |
| Phobius | 249 | 268 | 20 | - | – | |
| Phobius | 269 | 287 | 19 | - | – | |
| Pfam | 277 | 437 | 161 | 2.0E-26 | ||
| Phobius | 288 | 292 | 5 | - | – | |
| Phobius | 293 | 315 | 23 | - | – | |
| Phobius | 316 | 346 | 31 | - | – | |
| TMHMM | 347 | 369 | 23 | - | – | |
| Phobius | 347 | 371 | 25 | - | – | |
| Phobius | 372 | 390 | 19 | - | – | |
| Phobius | 391 | 413 | 23 | - | – | |
| Phobius | 414 | 419 | 6 | - | – | |
| TMHMM | 420 | 442 | 23 | - | – | |
| Phobius | 420 | 442 | 23 | - | – | |
| Phobius | 443 | 447 | 5 | - | – | |
| Phobius | 448 | 471 | 24 | - | – | |
| TMHMM | 449 | 471 | 23 | - | – | |
| Phobius | 472 | 502 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0047200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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