Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0055900.2

Overview

Field Value
Gene ID LotjaGi1g1v0055900
Transcript ID LotjaGi1g1v0055900.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Adenylate kinase; TAIR: AT5G60340.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FJI1|KAD6_ARATH Adenylate kinase isoenzyme 6 homolog; TrEMBL-Plants: tr|I3T9E6|I3T9E6_LOTJA Adenylate kinase isoenzyme 6 homolog; Found in the gene: LotjaGi1g1v0055900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:7849517..7851282) extracted from Lotus japonicus Gifu genome v1.2.

TCGAAGCGGCCACAACCCTAGCTTCAAAGCGTTCTCCTTTCGGTCTCGATTTTGCTTCCTTCGCTTTTCGCAGCTCGTTC TGATCCATTGGTGAGTATTTTTCATCTGTGCTCAGTGCCCTTTTGATGTTTGAATATCTGAGAAACAATGGTTACTTTGA AATACCCAATTCACCATTTGAAATTGTAATCTTCACTATTTTTCATGTGGGTCTCTGGAAAAGTTAGCAGTTATGGAGGA AACATGTTTAGGAATATATATTGTTCCTGAAATATGTTTTTTTTTTTTTTTTTTTCTGTTTATAGATTTGTTTTATGTGT AATGTGAATTGAATGAAGCAATATTTTACTATACGGCGATCTTTGAAGATTTGTTTTTCACTGACTTCAATTCACAGTGT TGTTCTGTAGTCATGGTGGAAGGAAGTGGCAAGAGGACCAGGCCAAACATTCTGGTGACTGGGACACCGGGGACAGGGAA GACAACGCTGTCAAGTTCTCTAGCAGAAGCCACTCAGCTCCGCCACATCAATGTTGGAGATTTAGTCAAAGAGAAAAACT TGCATGATGGCTGGGATGATGAGCTTGATTGTTTTGTTCTTAATGAAGACTTGGTGAGCTATCTATTTATATGTTCAAGA ACATTACTGTATGATTTTTTTTAGGTATAGTTAGTACCAGGGTTGTTAATGGTGGATAGCGTAGCGGCAAGCCCAAAAAA CGCTATTTCGAGAACTAGCGGCATGTAGCGGTGAATAGTGGTGGAGTAGTGGTGAACCCCAGGGCGCTACGCTATAGCGC TATCGCACTGCTATGGTGCGCTATTAACAAGCCTGGTTTGTACCTTAGTGGTGCCTTAGGTGTATAAGAATTGAGTTCAA ATGTTAACAGTGTTGGGGTCTGTTTTATGTAAGTTGCTATGAAATACCCTGCCCTCTAGCTCCTTAATGGCATATTTTGA TGGAGATCTCAATTTTATTTTGTTTTGCGGATGTGTGGATAGTAGGGTGATAGATTCAGTAAAGACTATGACTAAATGAT GATGGTTGTTATCAATGCCTGAGGTTTTTGTAGGTCTGTGATGAACTTGAGGATGTTATGGAAGAGGGAGGGAACATTGT GGATTATCATGGTTGTGATTTCTTTCCTGAGCGATGGTTTGATTGTGTGGTTGTACTTCAGACCGGTAACACTGTTTTGT ATGATCGTTTGAGCAGGAGGTATGGAAGCATTTGTTGTAGCTGAATGTTGATTTTTGCGATTCTATTACCGGTTTTATCA TAAACTTACTTTCTCCATTTTTGTGGCAGAGGATACAACGAAGCAAAACTTTCCAACAATGTTGAATGTGAAATCTTTCA AGTTCTGCTTGAGGAGGCTAAAGAAAGTTATCCGGAGGACAGAGTGGTTGCAATGAAGAGTGATACTATTGAAGACATTA GTAGAAATATTGCAACTTTGACTGATTGGGTCAGAAATTGGTCTTCTCCAGCTCAGTCATAACAAGGAAGATGAGAAATT TTTGTTTATACCTTGTAAGAGTATAGTCAATTTTTTTGTGGGGTTTCATGATGAATTGCAATCTGAATTTTGGAGTGTTG TTGAATTACCTCTTGCTACATTAGGTGCGCCATGTACTCTAGATATTTATGTTATGGCTTTTAAATAAAACAGCAAAAAA TATTGTTCAACTTTTACACTGAACAAGTTTAGGTGTGGCATGATGTACTGTGAGATATTTATGTTATGGCTTTTTAAATT AGACAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0055900.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTGGAAGGAAGTGGCAAGAGGACCAGGCCAAACATTCTGGTGACTGGGACACCGGGGACAGGGAAGACAACGCTGTC AAGTTCTCTAGCAGAAGCCACTCAGCTCCGCCACATCAATGTTGGAGATTTAGTCAAAGAGAAAAACTTGCATGATGGCT GGGATGATGAGCTTGATTGTTTTGTTCTTAATGAAGACTTGGTCTGTGATGAACTTGAGGATGTTATGGAAGAGGGAGGG AACATTGTGGATTATCATGGTTGTGATTTCTTTCCTGAGCGATGGTTTGATTGTGTGGTTGTACTTCAGACCGGTAACAC TGTTTTGTATGATCGTTTGAGCAGGAGAGGATACAACGAAGCAAAACTTTCCAACAATGTTGAATGTGAAATCTTTCAAG TTCTGCTTGAGGAGGCTAAAGAAAGTTATCCGGAGGACAGAGTGGTTGCAATGAAGAGTGATACTATTGAAGACATTAGT AGAAATATTGCAACTTTGACTGATTGGGTCAGAAATTGGTCTTCTCCAGCTCAGTCATAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0055900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVEGSGKRTRPNILVTGTPGTGKTTLSSSLAEATQLRHINVGDLVKEKNLHDGWDDELDCFVLNEDLVCDELEDVMEEGG NIVDYHGCDFFPERWFDCVVVLQTGNTVLYDRLSRRGYNEAKLSNNVECEIFQVLLEEAKESYPEDRVVAMKSDTIEDIS RNIATLTDWVRNWSSPAQS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 26 26 - –
Gene3D
G3DSA:3.40.50.300
4 177 174 8.1E-61 –
PANTHER
PTHR12595
7 175 169 1.9E-84 –
PANTHER
PTHR12595:SF0
7 175 169 1.9E-84
IPR020618
MobiDBLite
mobidb-lite
11 26 16 - –
Hamap
MF_00039
11 176 166 28.047
IPR020618
SUPERFAMILY
SSF52540
11 171 161 6.08E-24
IPR027417
Pfam
PF13238
13 133 121 2.2E-28 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004017
Molecular function Adenylate kinase activity Catalysis of the reaction: ATP + AMP = 2 ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0055900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…