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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0058100 |
| Transcript ID | LotjaGi1g1v0058100.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | T-complex protein 1 subunit eta; TAIR: AT3G11830.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9SF16|TCPH_ARATH T-complex protein 1 subunit eta; TrEMBL-Plants: tr|A0A0L9UVX2|A0A0L9UVX2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0058100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:8125027..8130015) extracted from Lotus japonicus Gifu genome v1.2.
ATGATGCAAACAGCAACCACAGATCATTCTCTTGAAGGAAGGCACAGACACCTCGCAAGGGAAAGCGCAGCTCGTCAGCA ACATCAATGCCTGCACCGCCGTCGCCGACGTCGTCCGCACCACCCTCGGCCCTCGCGGTATGGATAAACTCATCCACGAT GATAAGGGCTCCGTCACCATCTCCAACGACGGCGCCACCATCATGAAGCTCCTCGATATCGTTCACCCCGCCGCTAAAAT CCTCGTCGATATCGCAAAATCTCAGGACTCTGAGGTAACCAACCACCACCCCCTCCGATCTCGCGCGATTTTTTATATTT TCATATTTTATTTAATTAATTTTCTGTGATGTGGTGATTTTGGTAACCGTTTTTGCTTGATTTAGAAGCTTGAAATCGTT TAAATGCGTTCTTGTTGTTAATTTTGTTGTGAATGTGAAGGTTGGCGATGGAACCACCACTGTGGTATTGCTTGCAGCTG AGTTTCTAAGAGAGGCCAAGCCTTTTATCGAAGACGGCGTTCACCCTCAGAATTTAATTAGGAGCTACCGGACTGCGAGC ACCTTGGTACGTGTTTCGATCTCGAATACTTTGTAGAGTATTGTGAATGACTTGTTGCGGTATTTTAATTGTTATGTGTG ATAAATGGTGCAGGCGATTCAGAAGGTTAAAGATCTTGCTCTTAGCATTGAGGGAAAGAGTCTAGAAGAAAAGAAAAGCT TGCTTGCTAAGTGTGCTGCTACCACGCTTTCTTCGAAGCTTATAGGTGGAGAGAAAGAGTTCTTTGCATCCATAGTTGTG GATTCTGTTATTGCAATTGGGAACGATGACAGGTTGAACATGATTGGAATTAAGAAGGTACCTGTGTTGCTGCTTCTAGG ACCTTGTCTCTATATGCTGCACTCTCTCTTTTTACATTCGTAGCTGCGGAATGTGTTTTTCAGTAGAAAAAAATTATTGG CAAAAATAAGAATATGAAAAATAAAGGGTCAAGTATACTCTTAAAACGTATGCATTACTACCAAAAGACACACCACAAAA ACCTAATCAATGTATTAAGGCCATGTTGCACCTGTGCGTGTGTAGCCGTGTACTGTTCTACGAGTAAAGTAAGAGATTAT AGTGTGTACTTTCTCAGGTTTAAAGTTTAAAATGGCTAAAAGCGTTCAATAAAGCTTTTCAAAATAATTTAAATGCTTAT TACACGGCATCTCAGGAAAAATGTTTAACTATGGCAAGATCAATTTCACATCATTTATATACTTATTTTGGAATTAAGTT GATGGGGATTCTGCTGTTTTTCTTCAGGTTCCTGGTGGTACCATGCGGGACTCGTTTCTAGTAAATGGTGTTGCGTTCAA GAAGACATTTTCATATGCTGGGTTTGAGCAACAGCCCAAAAAGTTTTTAAATCCAAAAATACTATTACTTAATGTTGAGT TGGAGCTAAAATCTGAGAAAGAAAATGCTGAAATAAGGTGTGAATATCCAGAATTTGTTCTTATATGTATTCAGTTTTAA GAACACCCTGTTGAAGGATTTTTAGTTTACGTGACTTCCTTCTGTCTCTCTTGTTCTTTACAGATTGTCCGATCCATCAC AATATCAGTCAATTGTTGATGCAGAATGGAATATTATTTATGACAAGTTGGATAAATGTGTGCAAAGTGATGTCAAAGTT GTTCTTTCACGATTGGCTATTGGTGATCTCGCTACACAGGTTTGAATTGTTTTCTTCAATATTTTTTTTTACATGAGTGT ACATTGGTATTCTTATAACTGTTCATGATAATCTTAAAAATATATTCTTTTTACTGGGTTTCTTAAAAACTTTCATGGAT ATTAATATTAGTTTTGATTTTTAATAGCTTGTCCTTGAAACAGTATTTTGCAGATCGAGACATTTTTTGTGCTGGTCGTG TAGCAGAAGAAGATCTTAAAAGGGTTGCTGCCGCAACTGGTGGAACTGTACAAACATCTGTCAACAACATTATCGAAGAG GTTGTGAATTATTTGTGGGACTCTGCCTTGGTTTGCTCATTTTGTGATATCATTACATGCAACTGAAATTCTTGATTTAT CTGCTTGAAGGTTCTTGGAACTTGTGATGTTTTTGAGGAAAAGCAGGTTGGAAATGAGAGGTTCAATATATTCAGCGGAT GTCCATCTGGTCAAACAGCCACCATAGTTCTTCGCGGCGGAGCTGATCAGGTCTGTTTGAGGTCTTGCAATAACGGTTTA TATAGTTTGTATTCAACGCGATTAATCGATCTGCCCATTCGTTGGCTTATAGTTGTTTTTTTGCTATTCTCTTACAGTTT ATAGAAGAAGCAGAGCGAAGTCTGCATGATGCGATCATGATAGTTAGAAGGGCTTTGAAAAATTCAACTGTAGTTGCTGG TGGAGGTGCTATAGATGTATGTCTTCAAACTTTGTTGGTAGATCACATAGAATTATTTTAGTGAGTGTTTGGATGTTAAA ATGAGGTGGTTATTGTTGACAGATGGAAATTAGCCGGTACCTGAGGCAGCATGCGCGTACAATAGCAGGGAAGTCTCAGC TTTTCATCAACTCGTATGCAAAAGCTCTTGAGGTTAGTGTCTTTCGCGATTCAGTGTGATCCTCTGATCATCAACTCGTA TAAAAATAATCAGCACTGTGTTTCTTTACATTTGTTTTGATTGAACATTGGTGACATTGAAAAAGTTGTGATCCATATGC AATAAACTCGTAATTCTTGAAGTTCTTGAGGATGCTTGTCATTGTCATTTTTGTCAAAGATCAGAAACTTCTAATCATCT GCCTTAGTATTTTTTTTAACTTTTTATTATGGGGGAAGGGCGTGGGAACGGAACTGTCCTAGATGTTGGCAGCCACTGAC CATAGAAATATCATATCCAGTAGTTTTGCTGGATATACTTTCTTTCACAAAGAGATGGGCTCATCTTGAATTATCACTAT ACATCTGATGTAACATGCATATTAGCTTGGGAACTGTACGATATGAGATATGAAGGGTTAGAGATCTCATTCTTCTTCGC ATAGAATATAGTTATTTAATTGCAGTTATGGTGTTTTTGCAGGTTATACCTAGGCAATTATGTGACAATGCAGGATTTGA TGCAACTGATGTGCTGAACAAATTAAGGCAGAAACACGCGCTTCCTTCTGGTTAGTGCTTCTTTCGATATCCATGCTTAC TTACATGTGTTATACAAAAGTATGTGCCGGCATTACATGCAGAGCCATTGAAAAGTGGGGCTGCAATTGAGCCAAGTCTA GATATTCAGGTTGTTCAATTAAGAGCAGACTATGCTAGAGCTGGAGCTTATTTTGTGTTAAAGGTCATTGTTTAATAAAT GAACTGAGCTCTAGTACTCATTGTTTATGAATAATAATAACAACAGCTACAATGACAACATTTGCATACTTACTCACTCA CACACACGAAATGAATCAATTTAAGTGAAATATTTGTTTAGAATGTTATTATTACATTGTCCTCTCCTGTTAAATATTCA CACCGTCCAACTTTTTTTCGCGATATGCGTTATCCAAATATATAATTAAATTTGTAACTAAATTCTCGGGTTTATCTCAA TCAATTAAAGTTGTTCAAGCTTGTTTATTTGAAAAATAAGGTGAATGACTGATCCTGATTGCCGAGTAATTGTTTTGGAG TCTATATTTGATAAATTTATTCTGCTTTAGGAGTATTTTGATAATATGTTAACTATGTAGGAACATAGACCATATTTTCT CTTCATTATACTCCACTTCACTCCATTAGTCTTGAAATTTTGCTCAAGGACTTTCTTTTAATAAAAAACAACGAAGCTAA GTTTTTAGCTAGTCAGGTGCTAATAGATTATAAAATCTAAATAGCTTAATTGCTTGAAACCCCTACTCAAACAGCAACTA TATAATTTGTCTTGACAGAAGTTTACTTAGATTCAATTGATGCAGTCATATTTAGTATTTTCGCTTACAATATTTTTATC TCCTCAGCACTTGAGCAACTTCAAGTATGTGTCTGAATGTTTGGGTGTGATTGCCAATATCTATAAATGCATCAGCTATA GTGTGTTTTAAAGAGCTCTTTTGATAGGTTGGAGTTAGTCGTTATAAATTGCACTGCATTTGTGTTACAGGTGAGGGGGC ACCATATGGAGTGGATATAAACACTGGTGGAATTGCTGACTCTTTTGCTAACTTTGTCTGGGAGCCTGCAGTTGTAAAGG TATTTGCATTTATCTACACAGTTTTACATTCTGACTTCAATGTTTTATGTGGATTGTTTAAGTAAGTTTATAAATCTGCA GATCAATGCTATAAATGCTGCTACGGAGGCTGCTTGCCTTGTCTTAAGCGTGGATGAAACAGTTAAAAATCCCAAGGTAA ATGACCGACTGATTATATCATTGTGTATTTGGTGAATATTGTGTTTTTGTTCTTTGAAATATTTCCTTTCTGACTTTTTC AATTTGAAGGCAAATATTTCTTGCATATTAATTACATATGTGCAAATTTCACTTTTTTTTTTGATGACTCATTCTCAATT CTTTTAGTTGAAGACTTAGTATCTTGAAAGGATAATGCTATGTAAATTTCCATTTGGATATGTGCAGTGTAACATCAACA CTTCTCTGAATAATTCACCTGCTGTTCTATTTTTAAACACTCTTTTGTCTATTTAAGTTTTTTCATGTATCTTCATGCAT CAAGGAATGAGTTCTAGTTGTCATGTTTTTTTGCCCTTGCAAATTTCACGTAGTGTTCAATGAAAATGATAAAGTTCCTC CTTTAGATTATACCAATGCTTGTGCTGTCATAGCAATAAAGGAGGAACTTTGATGCAACTGATTTTGATTGTTTTAACTA TTATCATATGCAGTCGGAGAGTGCGCAAGGAGAGGCTGCAGCAAGTGCCATGGGAGGCAGAGGTCGCGGAGGTGGTTTCC GTGGTCGAGGACGAGGAATGCGTAGATGA
CDS sequence (LotjaGi1g1v0058100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATAAACTCATCCACGATGATAAGGGCTCCGTCACCATCTCCAACGACGGCGCCACCATCATGAAGCTCCTCGATAT CGTTCACCCCGCCGCTAAAATCCTCGTCGATATCGCAAAATCTCAGGACTCTGAGGTTGGCGATGGAACCACCACTGTGG TATTGCTTGCAGCTGAGTTTCTAAGAGAGGCCAAGCCTTTTATCGAAGACGGCGTTCACCCTCAGAATTTAATTAGGAGC TACCGGACTGCGAGCACCTTGGCGATTCAGAAGGTTAAAGATCTTGCTCTTAGCATTGAGGGAAAGAGTCTAGAAGAAAA GAAAAGCTTGCTTGCTAAGTGTGCTGCTACCACGCTTTCTTCGAAGCTTATAGGTGGAGAGAAAGAGTTCTTTGCATCCA TAGTTGTGGATTCTGTTATTGCAATTGGGAACGATGACAGGTTGAACATGATTGGAATTAAGAAGGTTCCTGGTGGTACC ATGCGGGACTCGTTTCTAGTAAATGGTGTTGCGTTCAAGAAGACATTTTCATATGCTGGGTTTGAGCAACAGCCCAAAAA GTTTTTAAATCCAAAAATACTATTACTTAATGTTGAGTTGGAGCTAAAATCTGAGAAAGAAAATGCTGAAATAAGATTGT CCGATCCATCACAATATCAGTCAATTGTTGATGCAGAATGGAATATTATTTATGACAAGTTGGATAAATGTGTGCAAAGT GATGTCAAAGTTGTTCTTTCACGATTGGCTATTGGTGATCTCGCTACACAGTATTTTGCAGATCGAGACATTTTTTGTGC TGGTCGTGTAGCAGAAGAAGATCTTAAAAGGGTTGCTGCCGCAACTGGTGGAACTGTACAAACATCTGTCAACAACATTA TCGAAGAGGTTGTTCTTGGAACTTGTGATGTTTTTGAGGAAAAGCAGGTTGGAAATGAGAGGTTCAATATATTCAGCGGA TGTCCATCTGGTCAAACAGCCACCATAGTTCTTCGCGGCGGAGCTGATCAGTTTATAGAAGAAGCAGAGCGAAGTCTGCA TGATGCGATCATGATAGTTAGAAGGGCTTTGAAAAATTCAACTGTAGTTGCTGGTGGAGGTGCTATAGATATGGAAATTA GCCGGTACCTGAGGCAGCATGCGCGTACAATAGCAGGGAAGTCTCAGCTTTTCATCAACTCGTATGCAAAAGCTCTTGAG GTTATACCTAGGCAATTATGTGACAATGCAGGATTTGATGCAACTGATGTGCTGAACAAATTAAGGCAGAAACACGCGCT TCCTTCTGGTGAGGGGGCACCATATGGAGTGGATATAAACACTGGTGGAATTGCTGACTCTTTTGCTAACTTTGTCTGGG AGCCTGCAGTTGTAAAGATCAATGCTATAAATGCTGCTACGGAGGCTGCTTGCCTTGTCTTAAGCGTGGATGAAACAGTT AAAAATCCCAAGTCGGAGAGTGCGCAAGGAGAGGCTGCAGCAAGTGCCATGGGAGGCAGAGGTCGCGGAGGTGGTTTCCG TGGTCGAGGACGAGGAATGCGTAGATGA
Protein sequence (LotjaGi1g1v0058100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDKLIHDDKGSVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRS YRTASTLAIQKVKDLALSIEGKSLEEKKSLLAKCAATTLSSKLIGGEKEFFASIVVDSVIAIGNDDRLNMIGIKKVPGGT MRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNVELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQS DVKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLKRVAAATGGTVQTSVNNIIEEVVLGTCDVFEEKQVGNERFNIFSG CPSGQTATIVLRGGADQFIEEAERSLHDAIMIVRRALKNSTVVAGGGAIDMEISRYLRQHARTIAGKSQLFINSYAKALE VIPRQLCDNAGFDATDVLNKLRQKHALPSGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLVLSVDETV KNPKSESAQGEAAASAMGGRGRGGGFRGRGRGMRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 481 | 481 | 8.6E-174 | ||
| SUPERFAMILY | 1 | 482 | 482 | 3.01E-73 | ||
| CDD | 1 | 485 | 485 | 0.0 | ||
| TIGRFAM | 1 | 485 | 485 | 1.1E-232 | ||
| PANTHER | 1 | 490 | 490 | 1.2E-252 | ||
| Pfam | 1 | 482 | 482 | 1.5E-147 | ||
| PANTHER | 1 | 490 | 490 | 1.2E-252 | – | |
| PRINTS | 12 | 30 | 19 | 3.4E-22 | ||
| ProSitePatterns | 14 | 30 | 17 | - | ||
| PRINTS | 42 | 61 | 20 | 3.4E-22 | ||
| ProSitePatterns | 42 | 50 | 9 | - | ||
| Gene3D | 98 | 360 | 263 | 8.6E-174 | ||
| SUPERFAMILY | 108 | 360 | 253 | 1.92E-25 | ||
| SUPERFAMILY | 163 | 333 | 171 | 1.26E-47 | ||
| Gene3D | 168 | 324 | 157 | 8.6E-174 | ||
| PRINTS | 328 | 350 | 23 | 3.4E-22 | ||
| PRINTS | 362 | 374 | 13 | 3.4E-22 | ||
| MobiDBLite | 483 | 515 | 33 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi1g1v0058100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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