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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0059200 |
| Transcript ID | LotjaGi1g1v0059200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB-POZ and MATH domain protein; TAIR: AT3G03740.1 BTB-POZ and MATH domain 4; Swiss-Prot: sp|Q9SRV1|BPM4_ARATH BTB/POZ and MATH domain-containing protein 4; TrEMBL-Plants: tr|K7KB30|K7KB30_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0059200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:8289166..8294132) extracted from Lotus japonicus Gifu genome v1.2.
CCTCAAAACCTCAAACCTTATCATCCACTATCCAATCTATCAAACAATGCAAGATCCAAGACTCATACTTCATCATCATC TTATTCTGACAACACGTGACAACTACCATTCACTTTTACTGTTTTACTACTACTAGTTTCCAAGTTAAAACAAACCTCAG GGGCAGAATTGACATTTCACATTGCTGTCAAACCTGCATCGTCGTCTTTATAAACCACCACTCTCTCTCTTTCTCTCTCT ACCCTCTTTCTCTCTCTAGAAAAATCCCCAAAAAATTGAAATCCATTTTCCTTCGAATTCGCATGAAATTCGGTTAACTC CGGCGACAACCATGGCCAGAACGGTGGAGAGAGCGGCGGTGCTGGCTTTACCGACGAGCTCGAGGTCAGTGACGCACACC GTGAACGGGTCGCACAAGTTCGCGATCGAGGGTTACTCTCTGGCGAAGGGGATGGGAGTAGGGAAGCACATTGCAAGCGA TGTATTCACCGTCGGAGGGTACCAGTGGGCGATCTACTTCTACCCCGACGGGAAGAATCCCGAGGACAATTCCGCCTACG TCTCCGTCTTCATCGCGCTTGAAAGCGAGGGAACCGATGTCAGGGCACTGTTCGAGCTCACGCTTATGGATCAGAGTGGT CAGGGGAAGCATAAGGTTCATAGCCATTTCGATCGTTCCCTTGAGAGCGGTCCTTATACCCTCAAGTATAAGCGAAGCAT GTGGTAATAAAGGGTTTTTCTCTGATTTCAATTTTGTGTTCATTTGTGGTTTTAGTTTATCCATGAATCGTTGTTTTCGG ATTGGGAATTTTCGTAATTGATTTGAATTTAGCTTCTGAAACACACTATTAATGTGAAGAGTAATTGGGAATTTTTTATG CATAGAATGAAATATGTCATTGTTAATGTTATCTAAACTAATTATCCTTTAGGGCACTGTAATTTGTCTTAGCGGTCCGC GTAATCGTATTGTTATGTTTTTTGTTTGTGGTTGGAATCCAAATTTTGATTGCCTGATGTCATTTCATTCAGTTTTGTGA AATTTGGATTGTGTAATCATTGATGTGGCATACTGGCATCCTGTAAATTTGGCTGCAGATTTTATGACTCACAAACCAGG GTTGTTAATGGCGGATACCATAGTGCAGCGGCAAGCTCAAAAAATGCTATTCTGAGCGCTATTGCGGCGTTATAGCGAAA ATAGCGGCAAATAGCGGTGAATAGTGTAGTAGCGGTGAACCCCAGGGCGCTACGCTATAGCACTATTCCGCCACTGTGGC GCGCTATTAACAACCCTGTCACCAACTAGAACAAACTTAAATGTTTTAAATTTACTTGCCCGGGCTTTTCTACTAGTTTT TATGTAAATTCACCATATCAATTACAAGGTTTGTTCTTAGATATACTTATGTTGAGTGCAAAATATGACTATATGGATGG ATAATGGATTGCAAAGGATGTTCTTGTATGGACCATGAATGCTAGATCAATATAAAAGTACTTTTTTTATGTGTTGATAT TTGTGAAATGTTGATCTTGTTTATATGTTCTTGTAGGGGGTACAAGAGGTTTTTCAGACGGTCTTTACTTGAGAACTCTG ATTTCCTCAGGAATGATTGCTTGAAAATCAACTGCACAGTTGGAGTTGTGGTTTCCGCTATTGATCACCCACAGAGTCAC TCAATTGATGTCCCAGAATCTGATATGGGATCACACTTTGGCGCACTGTTGGATAATATGGAAGGTCCAGATGTTACTTT TGATGTAGCTGGGGAAAAGTTCCCTGCTCATAAGGTGGTCTTGGCTGCTAGATCCCCAGAGTTTCGATCTAAATTTTTTG ATGGTTTAGATGCGGAAGAAAAGGAGATTATTATAACAGATTTAGAACCAAAGGTTTTTAAGGTAAACACACTTCATTTC TTATTTTTCTTTCCCTGATAGCATCAAGCTTGGTTAGGATTTAATCAATGTTATATGCACCTTTTCTGCTGGTTTTTCTT GTTAGATTTTATTTTTCTTGACATAAAAAAGATTCTGTAGTAGTTAAGAGGTCAAGTACAACCAGGGAGGATAGATATCC TGATTTTCCTCTTACTGTTTACAGGCCATACTTCATTACATCTACAGGGATACCCTTACAGAAGAGTTGGACATGGTTCC ATCAACCACATCAAATGATTTTCTAGTTTCTGAGACATTGACAGCGAAATTGTTAGCTGCAGCTGACAAGTATGGCTTGG GAAGGCTTAGACTGATGTGTGAGTCCCGTCTTTGCAAGGACATTTGTGTGAATTCTGTAACCAGCATTTTAACCTTGGCT GACCACTGCCATGCCACAGAGTTGAAAGCAGCTTGCCTGAAATTTGCTGCTTTGAATCTAGCAGGTACACTTAATTTGTA TCACTTGCATGGTTTGACCAAAGGTATATTGTAGGTTCAGGGTCTTAAAGCGTAAAGACAATTAAGTACAAATTTACATT CATCCTTATCAACTTGCCCATCTAACAAGTAACGGAATTCATGAGTTAGCTAATGTATGGAAGCTTTGACGAAAGTCCAC TTGGGCTTACCGTTTCTCATGGTTTGACCAAAGGTATATTGTAGGTTCAGGGTCTTAAAGCGTAAAGACAATTAAGTACA AATTTACATTCATCCTTATCAACTTGCCCATCTAACAAGTAACGGAATTCATGAGTTAGCTAATGTATGGAAGCTTTGAC GAAAGTCCACTTGGGCTTACCGTTTCTCATGCGCCAAATTTAACCTAGTTTTCTAGGAGAAATTTAAACTAGTAGAAATA ACGGATAACAGCAATAACATCATGGCTATGCTAACAAGCACTCAGTGTCTGTGTCTCAGAGTATTGATTAATTCAAGCTA AACCTGATTTGACATATTTGTTCAGGAATTAATTAAGATGTGTAAAAAGTTTTACACTATCAGTGAATAAATTATGCCAC TTGTATAATAAGCCCTTCAAAGCTTTTCATTGAAGGGAAAGTTAGCAACAATAATGATGCTTCACTTTCCTCATTACTAA TAATGTCAGAAGTCTTAAGTTGGCAGTTGATGAAATTTGGAGTCATTTAGTTATTATCTTCATGTTCTCTAAATGTCTCT ATTTGCAATTGCATTATCTCCTTAGTCCTTTCTTGTCTGTGTCAGCATCTCTCCCATAAGATGTGTTCTCTTCCACTCTA ATTATGTGCAATGCTTTTGACCCCACCCCACCCCCCCCCCCCCCCCCCCCTTAACCTGCAATATGGCATGATTTATGATG AGTATTATGATGCCATTTGATTTGTACTACCATCCCCGTCCAATGGGAAAATATTTCTGTGTATTAGACAAATGCTAGCA ACATGCTCTCTTAACACACTCTTTATGTGTGTAATAATCGCTTAAATATAGCAGAAGTCTATAGATGGTGCGTTGAGTGG GAGGTATAGCTCCACCCATACATACCTGTCTATTTTAGTTAGGTATATACGTCAAAGCCAGGTACTATGATTGATAGGCA AATGACATTCTCAATCCTAATATGCACTACAGGAGAGATGTTCTGTCCTTCTCTTCACAGAAATCTCATTTATTGTGGAA AGAAATTTTTTGGGCGTGTCTCACTTCCAAAAGTTTCTGTTTTCTATTTTATACTTCTAATCAAACGAGGAAATCTTCAT TTCTCTCGAAGCTCTCTTTTCTCATTTTCTCACTTTCCCTTTTCTACTAATCCAAACATTGCGGCAATATCAGTAAAATG AATATCTTTGACTTCGGTAATAGAAAATTATAATTTTCTTTTCCTTCAACTTTTCTCATGCTTGATATGATGGTTTTTTG TCTGGACTTTTTGCAGGTGTCATGAGGTCAGATGGATTTGAGCATATGAAAGAAAAATACCCGGGGCTGCTGCCAGAGAT ATTAAAGACAGTTGCTGGCTGTGACGATGGTAGTTGCAGCGCAGAGGAAAAAGCTCTGAGTGTGTGGGGCCAACTTTCAG ATGGTGGTGACTCAAATGGAAGAAGGGTCAGGCAGAGAATGTGATATCTGTTGTTACTACCTGACTTTGTAAATGCAGGT GATTTTACTGAAAAAACGGGGGAAGAGGGAAAATCCTCTTCTTCCAACTTTTCCATATCTGAGTGGGAAGTCATTTAGGA AAAGCAGATATAGACAAGATGCACTGCAGGTTTTTTTTTTTTAATGTAAAATGTTATCCAGCGGTGTCTGTGTTGTTAGT GCAGAGTAGCCATTGAAAATGCACTCATCTGCAGTAGACTTTCGACACTAGTGCATGTTTGGATGTGTGCTGAGCACACT CTCCAAAGCATGTTAGCCGAGAAACTCCATGTTGTAGCTTATTGACCCTCACCTGCTTTGTTCTTTGCAGACCTTAGTTC TATACTTATGTTTGTACAAGTAGGTTAATTAGGATGGTTGTTGTACCATGTATACAAATATTCATTTTATATCATGATAC ACCACACAAGGTGTTAATGAGTTTGGTGGTCATGCATTCTGTCTTGAATTGGGATTTGATGTTTCTCGACGACGCGTATC TTTGGGTTTTCGTTGAAATTAATGCTGGTTCACGTTTGAATCAATGTCGCAAAATCTTGTCTTTTCGTTGATGTGTTGGA TGTGTGTATGGAAACCGGAAACCAAAAGGATCAGACATTGTGTACTGTAGCCTATCTAGCATGACTACCTCAGTTTTCCT TTTCAAGTTATAGCATTGTGGAAAGGGGATGAGATGTTTCTGTAAACAGATTGATCGAATAAGGGTTCGAGAGATTATCA AAAGTAAGTTGATTGATTGAGGAGAGGGGTGGTCTTACACTAAGTGAGCTAAATTTATGTAAATTTACTTTTAAACTTTT TCATTCTAATTCTTCTTTTCATAAATCAAATCTGAAATATCATCCTATTTTTTCCAATAAATTTTTTATTTTTAATTTAT ATTTCAC
CDS sequence (LotjaGi1g1v0059200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAGAACGGTGGAGAGAGCGGCGGTGCTGGCTTTACCGACGAGCTCGAGGTCAGTGACGCACACCGTGAACGGGTC GCACAAGTTCGCGATCGAGGGTTACTCTCTGGCGAAGGGGATGGGAGTAGGGAAGCACATTGCAAGCGATGTATTCACCG TCGGAGGGTACCAGTGGGCGATCTACTTCTACCCCGACGGGAAGAATCCCGAGGACAATTCCGCCTACGTCTCCGTCTTC ATCGCGCTTGAAAGCGAGGGAACCGATGTCAGGGCACTGTTCGAGCTCACGCTTATGGATCAGAGTGGTCAGGGGAAGCA TAAGGTTCATAGCCATTTCGATCGTTCCCTTGAGAGCGGTCCTTATACCCTCAAGTATAAGCGAAGCATGTGGGGGTACA AGAGGTTTTTCAGACGGTCTTTACTTGAGAACTCTGATTTCCTCAGGAATGATTGCTTGAAAATCAACTGCACAGTTGGA GTTGTGGTTTCCGCTATTGATCACCCACAGAGTCACTCAATTGATGTCCCAGAATCTGATATGGGATCACACTTTGGCGC ACTGTTGGATAATATGGAAGGTCCAGATGTTACTTTTGATGTAGCTGGGGAAAAGTTCCCTGCTCATAAGGTGGTCTTGG CTGCTAGATCCCCAGAGTTTCGATCTAAATTTTTTGATGGTTTAGATGCGGAAGAAAAGGAGATTATTATAACAGATTTA GAACCAAAGGTTTTTAAGGCCATACTTCATTACATCTACAGGGATACCCTTACAGAAGAGTTGGACATGGTTCCATCAAC CACATCAAATGATTTTCTAGTTTCTGAGACATTGACAGCGAAATTGTTAGCTGCAGCTGACAAGTATGGCTTGGGAAGGC TTAGACTGATGTGTGAGTCCCGTCTTTGCAAGGACATTTGTGTGAATTCTGTAACCAGCATTTTAACCTTGGCTGACCAC TGCCATGCCACAGAGTTGAAAGCAGCTTGCCTGAAATTTGCTGCTTTGAATCTAGCAGGTGTCATGAGGTCAGATGGATT TGAGCATATGAAAGAAAAATACCCGGGGCTGCTGCCAGAGATATTAAAGACAGTTGCTGGCTGTGACGATGGTAGTTGCA GCGCAGAGGAAAAAGCTCTGAGTGTGTGGGGCCAACTTTCAGATGGTGGTGACTCAAATGGAAGAAGGGTCAGGCAGAGA ATGTGA
Protein sequence (LotjaGi1g1v0059200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MARTVERAAVLALPTSSRSVTHTVNGSHKFAIEGYSLAKGMGVGKHIASDVFTVGGYQWAIYFYPDGKNPEDNSAYVSVF IALESEGTDVRALFELTLMDQSGQGKHKVHSHFDRSLESGPYTLKYKRSMWGYKRFFRRSLLENSDFLRNDCLKINCTVG VVVSAIDHPQSHSIDVPESDMGSHFGALLDNMEGPDVTFDVAGEKFPAHKVVLAARSPEFRSKFFDGLDAEEKEIIITDL EPKVFKAILHYIYRDTLTEELDMVPSTTSNDFLVSETLTAKLLAAADKYGLGRLRLMCESRLCKDICVNSVTSILTLADH CHATELKAACLKFAALNLAGVMRSDGFEHMKEKYPGLLPEILKTVAGCDDGSCSAEEKALSVWGQLSDGGDSNGRRVRQR M
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 375 | 364 | 2.7E-188 | – | |
| PANTHER | 12 | 375 | 364 | 2.7E-188 | – | |
| SUPERFAMILY | 23 | 163 | 141 | 7.85E-35 | ||
| Gene3D | 23 | 163 | 141 | 6.5E-33 | ||
| ProSiteProfiles | 25 | 159 | 135 | 23.945 | ||
| CDD | 26 | 159 | 134 | 2.70994E-29 | ||
| SMART | 30 | 142 | 113 | 3.9E-12 | ||
| Gene3D | 170 | 300 | 131 | 4.2E-37 | – | |
| SUPERFAMILY | 173 | 304 | 132 | 2.51E-26 | ||
| CDD | 181 | 303 | 123 | 8.5467E-58 | – | |
| Pfam | 187 | 304 | 118 | 7.5E-23 | ||
| ProSiteProfiles | 195 | 261 | 67 | 17.955 | ||
| SMART | 195 | 306 | 112 | 2.2E-21 | ||
| CDD | 303 | 364 | 62 | 4.67497E-23 | ||
| Gene3D | 305 | 378 | 74 | 1.8E-17 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0059200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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