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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0064900 |
| Transcript ID | LotjaGi1g1v0064900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UBX domain-containing protein, putative; TAIR: AT4G15410.1 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma; Swiss-Prot: sp|Q7Y175|PUX5_ARATH Plant UBX domain-containing protein 5; TrEMBL-Plants: tr|Q9AXJ7|Q9AXJ7_MEDTR Phosphatase-like protein Mtc923; Found in the gene: LotjaGi1g1v0064900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:8992929..8998343) extracted from Lotus japonicus Gifu genome v1.2.
AGAAGATCGACGCGCGAAGTAAAGCAACGAAACGGTGTCGTATGGCATGAAGCAATCGAGTGCGTGTGAAACTACTATAT ATAGTCACACACAGAGAGAGTGTGTGAAGCAACAATCAACAATGGAGAGCAGCGAAGATCCCAAACCCGACGGCAACGCC GCCGCACTCATCGCCGCATTCTGCGAGATCACCGCCTCCACCAAACAACAAGCCCTCTTCTTCCTCGAAAGCCACAATTT CGACCTCGACGCCGCCGTCTCCACCTTCCTCGACGACGACGACAACACCCTAATCAACCCCACCACAACCGCCACCGCAA CCGCCGCCGCCGACGACGACGAAAACGAAAACGACGCCGTTTCACCCTCCGAGCCTCAATCCCCTGACTTCTACCCTTCC CCGTCTCCCTCACGCTCGCCTTCCCCTTCCCACTCCCCCTCTCGCGCCCCCTACGAGCTCCGATCCCGCAGGTCACTCGG CAAGAAACCTTCCTCCTCGTCTTCCGGAACCCGCCGCGGTGGAATCCGCACGTTCCGTGATCTCAATCGCGGATCCGGTA CCGATTCTGAATTCGATGAACCGCCTCCGGAGGAGTACTACACTGGTGGTCAAAAGAGGTGAAATTCAATTCCTCATGGT TTTAGTTGTGGAATTCTCTTGATTCTTGAATAGGTTTTGATTCAATGCTGAAAACTTTAGCAATTGGGGTTTTTATGTGC AAATTGTAAAACCTAACATCATGCTAATAGTCAACTTCACTTACCAATGGGTAGTGGTTGGTTCAAGTCCCCTTATGCAA TGTCTCGGGTTCGAGTCTTGTGGGAGAGTTAGCCCCATGTGGATGTTCCGGCTCGAACAGGATTGCCTCCGAAGAAGAGT CTTGCACCAAAAAAAAATAGTCAACTTCCCTTTTGTGATTGCTATTTATGACATGTGTATTTTTCTTTCTCATATTAATA ATGCACCTGTTGTTTTCAATGTTGCAGTCTGATTCAAAGGTTTAGTGTTGGTTTGGTTTTCAGTTTGAAAGTGTTTTCAC CCAACGGAGGTTCAAAGCCTCGTTCATGTTTAGGGCATTGGAATGTGTGATCTCGAATTTCAATGCCCCGAACGGACTTC CAAACTGAAAACCAAACACAGCCTCGGACTTTAGCAATTGGGATTATGTGCAAATTGTGAAACCCAACATTATTATGCTA ATACTCAACTTCATTTGAGATTGCTATTTTTGACATGTGTGTATTTTTTTTCTCATATCAATTATGTACTTGTTGTTTTC AATGTTGCAGTGGAATGCTTGTGCAAGATCCTACCAGAGGTGGTGGGAACAGTGTGGATGATATTTTTGATCAAGCAAGG CAGGTAGCTGTTGATCCACCTCCAACTGAAAACTCTTCTAGGTCAAGGAGTTTCAGTGGAACTGCCAGGTTGCTTTCTGG GGAGACATTGCCGTCTGCTCCTCAACCGGTAGGGGAGATCACGTACGCGATCACGTTCTGGAGGAATGGTTTCTCGATCA ATGATGGTCCTTTACGGAGGTTGGATGATCCACAAAATGCTCCATTTATTGAGGTAACTTGCTTTGAAGTGTTTGTTTCC ATAATCTAATGTTTGTCTTCAGAATTTATTGAATGCTATTTATGCACTCTTTCTAGTAGAATTAGAGTCTGTTTAGGTAA ACAGTTTGATTTATCACATAAGTGCTTATTCATAAGACTATTTGAGAAGCTTATTGAGATAAACTTAAAGGAACATATAT GCAGATATGAGCATTTATTGATAAGCTAATATAAGAAGTTTATGAAAATAAACTCAAAAGAGTTTATAGGTTTCATAAGT TTACCCTAACACTTATGGATAAGTGCTTATACTATAACATAAGCTTGAATAAGTTGTTTCAAACATAGTCTTAGTATTAT ATACTTATCATTAGTTAACCTCAATGCAGAGCATAAAGAAGGGTGAATGTCCCAGAGAGCTTGAACCAGTTGATCGAAGG ACTTCGGTTCATGTCAACCTCTCAAGGCGTGAAGAAAACTACCCTGTATGCCCCTTTTTCTTTTCTCATCAGCTTTGGAT TTGTGTTCTATCTGTGTAGGTTTTAACCTTCCCTTTTTCTTGATATATACAGGAACCGGCGAAGCCACGCCATCTTCCAT TCCGGGGGGTTGGAAGAACCTTAGGTAGCAGCAGCTCCGGCAGTGAAGCTGCTGGTGAACCTATTCAAGCAACTGCTGCT GCTGCTTCTTCACGAAGTACAGCTCCAACGCCAGAAATCGGTTTAGTTGTGGATGATTCCAAGCCGGTGACATCAATCCA GCTAAGGTTGGCTGATGGTACGCGCATGGTTTCTCGCTTCAATCACCACCACACAATCAGAGATATTCGAGCATTCATTG ATGCATCAAGACCTGGCGGAGCTAGAAGTTACCATATGCAGACAATGGGTTTTCCTCCCAAACAGCTCACTGATTTGGAG CAGACTATAGAGCAAGCTGGTATAGCCAATTCAGTTATTATCCAAAAATTGTAGGTTGTTTACCTGTTTTATTTCCAGTC AAATTGAAATTACTTTATCTATGCTTAGATATTGATTTATCTACTTTGTGAATTTCATCAAATGTTCATTGTTTTGGTAT AATCCTCTATCCCAAATTGCTTTCATGGTAAATGATAATTGAATGGAGGCCAGAATTACCAGGAATGGTACTTGGTAGTG CGATTTTTTGTTTGGTCACATTGCCCAATAATTTTGATTTGAGTTAATTACACTTTTGGTATCCATGTACTAATGTTTCT GCTGGTAAGATGTTATCAAAAATCGTATTCACAAAATTATACTAAGTTGTAAGTTCAATTCTTGACCTAATTCCCTTCAT ATTCCAATTTTGAACTAGCATTAAGTAAAAGAGTTCACACTTAAAAATGTTACTATGCAAGAAATGAGCACTTCTCCTTG AGCCATTCCAATAAGAGTTCGCTTAAATCACATCAAATGCATCACCTAACATAATTGTCTTGAGTCCAATTTCTTTCACT ACAAAGATGAGATGTGCTGTAACTTCACAAGGAAAAAATGAGTCACGTTCACAACTCCTTTTTATGAATTTGTTGTTTCT CTCCCACTCTGTTTTTACTGTTTAAGGTAATTATTTGCTATCTAATGTCATCCACTACCATATACTTAAAAATATTGTAA GATACCGACTACCTTTTTTTGTTTTTTACATATCATGAGATTCTATTATCGGTTTGTATTGGAGATAATGTTAGGGTAGG TCAAAGAATGGTTCTTGTTGGCGAACCATAAGCATTTTTTTTGTGAAAAACTAGCCTACATGACAAGATATTGAATGAGC CAAGACTAGGGTGATCATTAATATTTTAGTCCAGTAGTGCATCAAGGGATATTTTGGTGATCTCCCTTCGACTCTTCCCT CCCTCCCACAGTCCCACTCTACCCCTCCTATTCACCTAGGCTCTGGAGGTAGAACCAATTTCGATGATGATGTATTCAAC TCATCAATCCATAACACTACATGTACTGCTTTCTCTCTTCTACTTGTTGTCTAGCACATGAGAACCATGAGTTTTAGCAG TATCATAAAGGAAGAGGCTTGTTAAGATGGGTTTGAGATTCGTCACTATAGAGAAGTGGCTATTGACGTTGGGCACCTTG TGCTCCAACACTAACTCAATGGTGTATGATTCTACACAGATTTGAGAAAAAACATTGAAGCTGCACAAATCTGAGAAAAA ACGAGTGCCACCACTAGAAAGGCAAATTTTTCTGGAGGAATGATGTGCGAACAATTGTTTTTTTTTTTTTTGATAAGCGT GCGAACAATTGTGTGGCTATCCTATGTGTTCGTTAAAGGGATTGGTGACATGTTCGTTCTTTTGTTCATGCACGACTAAA GGTTCTCATCAATGGCAAATCAGGGGTTCAATTTTTCTTTTTGGGTGATGCATATATGAAGGAAAAACTTGAGAGAGGAA ATAACTCGCTGGCAGTGGAAAATGAAGCTCTAACAATGTTGAACGACAATGAGAGGCGAAGCTCCAACGATGTTCAGGAC AGTGAGTGGCAGAGCTCCAGTGATATTGGCGACTGGACTGGGCGGGACACCTACACAAATGAAAGAACGGCGACACAATT ATCAGAAGGACGAAGTAAATGATAAAGGCAGGCGACGAAGCAACGTATAAAGACATTTCGACTCAACTTACTTAAGCCTC ATGTCTTGGGGGAATGTGGACTGGGCGGGATATAAGTATCTCTTATTCCCGCCCAAATCGAGCATTTAGATGAACGAAAG CAGCCATGGCGGGGTTTGTGGAACAACGTCGAAGCCCGCCCTTCTTTTGGATGGGTCCACGCGCCAGCTGGAAGATTCCT TTAGTTTTGTCTTATATGAATAGAGGCTTGGGCCCCGGTTGTCAGGCCCAAGTACAGTGAAAGTCCACGTTATGATCATT CCCTCTATAAAAGGAGAGGTCAACCCCTTGTAAAAAGTACCTTTTGAACATTTAATGAGAATATTCCATTTGTGATATTT TTAGTACTCTGCTAGGATTTACTTTCTGTCAGTTTCCGACGTCAGATCTCCCTAGTACAGAACATTGGCGCCGTCTGTGG GTCTTACCTCGATCTACAACTTGACGTAGACGGTGAGCTTAAAGATCCATGGAAACCCGTTCGTGTGGCATGGGCCGCCG AGATCATCGCCGGAGGGGGGGTGGTCGTTACGGTGGCCGCGGCGGCGGACGACACAACAATCACGAAGTACCACAAGAGC CGGAGCAGGAGGCTTCGTCGGAAGGAGTTCACTCGGTGGCACAATCACCGGTGTCGTTGGTGAAGGCTGCTCCGGGAAAA CCTTCAGATCTGATCGCTAGATCAGATCCAGGAGTCAGGCGACGATCAGCACCGCCTGAATACGTGAATCTGGACGACTA CAAAAGCAGCGTTCCGAGAAAAGCACCAGAAGTAGTGACGGGAATCACTCCGGCGGCCTTGCAACAAATGTTGAATACTT TGCAAAAAGTGCAAAGTCAGAATGAACAATTGCAAGCCCAGGTGGAGTATTTAACCCAGCGACAAGACTATAAGCAAGAA CAACAGCTCGAGGCTGAAGACGTTGTTGAGTTCCAGCCTTTTGTTCCCGCCATCACAAGGGTGGGCATACCAAAGCATCT GCAAACGATGGCTTTGGACGCCTTTTCAGGCGACTCAGACCCCATGGAACACTTGCGTTACTTTAATACGAAAATGGTTA TTGGAGGAGCGACAGATGAGGTGAAGTGTAGGTTGTTACCATCAACATTCAAGGGGATGGCGATGCAATGGTTCATCCGT CAACCGCCCTTCTCTATCAACAATTTTACTGATTTGTCCACAAAGTTCTTAACTC
CDS sequence (LotjaGi1g1v0064900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCAATCGAGTGCGTGTGAAACTACTATATATAGTCACACACAGAGAGAGTGTGTGAAGCAACAATCAACAATGGA GAGCAGCGAAGATCCCAAACCCGACGGCAACGCCGCCGCACTCATCGCCGCATTCTGCGAGATCACCGCCTCCACCAAAC AACAAGCCCTCTTCTTCCTCGAAAGCCACAATTTCGACCTCGACGCCGCCGTCTCCACCTTCCTCGACGACGACGACAAC ACCCTAATCAACCCCACCACAACCGCCACCGCAACCGCCGCCGCCGACGACGACGAAAACGAAAACGACGCCGTTTCACC CTCCGAGCCTCAATCCCCTGACTTCTACCCTTCCCCGTCTCCCTCACGCTCGCCTTCCCCTTCCCACTCCCCCTCTCGCG CCCCCTACGAGCTCCGATCCCGCAGGTCACTCGGCAAGAAACCTTCCTCCTCGTCTTCCGGAACCCGCCGCGGTGGAATC CGCACGTTCCGTGATCTCAATCGCGGATCCGGTACCGATTCTGAATTCGATGAACCGCCTCCGGAGGAGTACTACACTGG TGGTCAAAAGAGTGGAATGCTTGTGCAAGATCCTACCAGAGGTGGTGGGAACAGTGTGGATGATATTTTTGATCAAGCAA GGCAGGTAGCTGTTGATCCACCTCCAACTGAAAACTCTTCTAGGTCAAGGAGTTTCAGTGGAACTGCCAGGTTGCTTTCT GGGGAGACATTGCCGTCTGCTCCTCAACCGGTAGGGGAGATCACGTACGCGATCACGTTCTGGAGGAATGGTTTCTCGAT CAATGATGGTCCTTTACGGAGGTTGGATGATCCACAAAATGCTCCATTTATTGAGAGCATAAAGAAGGGTGAATGTCCCA GAGAGCTTGAACCAGTTGATCGAAGGACTTCGGTTCATGTCAACCTCTCAAGGCGTGAAGAAAACTACCCTGAACCGGCG AAGCCACGCCATCTTCCATTCCGGGGGGTTGGAAGAACCTTAGGTAGCAGCAGCTCCGGCAGTGAAGCTGCTGGTGAACC TATTCAAGCAACTGCTGCTGCTGCTTCTTCACGAAGTACAGCTCCAACGCCAGAAATCGGTTTAGTTGTGGATGATTCCA AGCCGGTGACATCAATCCAGCTAAGGTTGGCTGATGGTACGCGCATGGTTTCTCGCTTCAATCACCACCACACAATCAGA GATATTCGAGCATTCATTGATGCATCAAGACCTGGCGGAGCTAGAAGTTACCATATGCAGACAATGGGTTTTCCTCCCAA ACAGCTCACTGATTTGGAGCAGACTATAGAGCAAGCTGGTATAGCCAATTCAGTTATTATCCAAAAATTGTAG
Protein sequence (LotjaGi1g1v0064900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKQSSACETTIYSHTQRECVKQQSTMESSEDPKPDGNAAALIAAFCEITASTKQQALFFLESHNFDLDAAVSTFLDDDDN TLINPTTTATATAAADDDENENDAVSPSEPQSPDFYPSPSPSRSPSPSHSPSRAPYELRSRRSLGKKPSSSSSGTRRGGI RTFRDLNRGSGTDSEFDEPPPEEYYTGGQKSGMLVQDPTRGGGNSVDDIFDQARQVAVDPPPTENSSRSRSFSGTARLLS GETLPSAPQPVGEITYAITFWRNGFSINDGPLRRLDDPQNAPFIESIKKGECPRELEPVDRRTSVHVNLSRREENYPEPA KPRHLPFRGVGRTLGSSSSGSEAAGEPIQATAAAASSRSTAPTPEIGLVVDDSKPVTSIQLRLADGTRMVSRFNHHHTIR DIRAFIDASRPGGARSYHMQTMGFPPKQLTDLEQTIEQAGIANSVIIQKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 37 | 450 | 414 | 2.2E-189 | – | |
| PANTHER | 37 | 450 | 414 | 2.2E-189 | – | |
| Gene3D | 37 | 78 | 42 | 4.1E-10 | – | |
| SUPERFAMILY | 39 | 77 | 39 | 1.28E-6 | ||
| Pfam | 40 | 79 | 40 | 1.3E-12 | – | |
| MobiDBLite | 90 | 207 | 118 | - | – | |
| MobiDBLite | 112 | 128 | 17 | - | – | |
| SUPERFAMILY | 245 | 340 | 96 | 1.31E-28 | ||
| SMART | 247 | 344 | 98 | 7.9E-38 | ||
| ProSiteProfiles | 253 | 317 | 65 | 33.842 | ||
| Gene3D | 253 | 315 | 63 | 1.9E-24 | ||
| Pfam | 258 | 332 | 75 | 1.7E-28 | ||
| MobiDBLite | 311 | 368 | 58 | - | – | |
| Gene3D | 319 | 450 | 132 | 3.3E-39 | – | |
| SUPERFAMILY | 327 | 448 | 122 | 3.9E-26 | ||
| SMART | 369 | 450 | 82 | 8.1E-4 | ||
| ProSiteProfiles | 372 | 449 | 78 | 20.803 | ||
| Pfam | 374 | 449 | 76 | 5.2E-17 | ||
| CDD | 378 | 449 | 72 | 2.86333E-36 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0064900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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