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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0065600 |
| Transcript ID | LotjaGi1g1v0065600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nitrate transporter 1.1; TAIR: AT3G21670.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9LVE0|PTR33_ARATH Protein NRT1/ PTR FAMILY 6.4; TrEMBL-Plants: tr|A0A0S3RK87|A0A0S3RK87_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0065600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:9067928..9073455) extracted from Lotus japonicus Gifu genome v1.2.
AATAAGAGTTGTATCCATCAATCTCTCTATTTTCTTAGATGCTGATTTAGTTTTATTCCTCTGTGTAATTCATCTAGCTT AGAGTCTTGAGTGAATTTTAAATGCAAGATCTTAAAAAGGAAAAAAAAAACAAAAACAAAAAATGGTTGCATGTTTCATG GAATAAAATTTTAAACATTTCATAGAGTTTTGGAATAATTATATATAAAAAAAATCAATATTAATAAATTATAAGGTCAT TACTATTCAACAAAAAAGACAGAAAATACATTTTACATCTTTATTATTCATTATTACAAGTCGATGCTTACACTTAAGAA AGAGCAAGGGGTTTGTAAAAAAAGCTTAATATAAGGTGTTTTGGGCAATGGTACAAGTCATTTTGAACTTTTAAGTTAAT CCATTTCCGGCTGCAACACAGAAAACATGGTATAAACTTCATTCATCTTCATGAACTTTTGAAGTTGTTCAAAGATTAAA AACATTGTTAATGTTTCAATGGTTTTGTTGTTGTTTTTCTGTAACCTCAATTTTACAGGTTCAAGTTGCAAGCCATGGTG AGAAAAAAGGTGCTGAAGACATTGCTGCCGCCGTGGATTATCTAGGTCGCCCGCCTGACAAATCAAAAACTGGGGGATGG ACTGCAGCATGGCTCATCTTAGGTTTTTTCTTAGGCCATGTTTTATAGTTGCATCAAAAGTAAATGTGATTTAAGTTAAT GAAGCTATTAGGTTGCTTTCAAGTTTCCGTATCAATTTTTTTTGTTTTTTTCGTTAATTTAACATTGGAATGCACGATAA CAGGATCTAATGGTTATCCAAAGAGACTCTTAAGACCATGTTTGGATATCAGTTGGTTGAACTCATAAAACACATTTCAA TCCTTCCAATGCACTAAGGAAAATGAAACTCTCTTTATGGATTGACAAAAAAAAAGTACTCTCACTATGAGTTTAACTTG TATCCAGACATTAATCCTTAGAAATGATTGTCACGTTCTCAAGGTTGAACTTAGGACATCCATATACACTTTGGCATATG GTAGCAAGTAGAAGCTAAATGAATTAAGATATAAAAAGTCCTTATTGAAATCTATAGCATTTATGCTACACGCCCCTTTA ACAAAACCCATATTTTTTCATGCAGGTGTTGAGCTGGCTCAAAAAATAATGGTTTTGGGCATATCCATGAACATAGTGAC CTACTTGGTTGGAGTTTTAAACCTCCCAACAGCTTATTCTGCCACCATAGTTACCAATTGCTTGGGAACTATGAACCTGG TTAGCCTTCTTGGTGGCTTCCTAGCTGATGTCAAACTAGGCAGATACCTCACTATTGCTATATCAGCAACCATTTCAGCA GTGGTAAGTTCAAGTTTTTAGGTGAGTGATCTACTTATATTTTTTAGTGAATGTGTGGGATCTAGTTATACTTTTGTTTT TGTTTGTTGTGTTCGTTATGGATTTGTGAGTAAGCATGTCTTGTACAATAGTGCTTAATATCTGAACCATTGTAGCATGG CTCTTACATGGGATTTATCTTCCCGTTTGTTTGATGTAAGTGTCGTTTGACCACTCATGGGTTTAATCTGATCACCGTTG ACGAACAAAAATTACACACCACCGCTTAATTAAAAGTCTTAAGGCAATAAATATATAAGATATTTATATTTATGATACTT ATTTAACCTATTCTTACGCTATGCAAAATTTATCATCTACACTTAGAAATACCAAGTACTAACACTTTTGCACCAGGGAA TGTGTTTGTTAACTGGGGCTACGACCATTCCAAGCATGAAGGCCCCTCCATGCAGTAGTGTCCAAAGACAACACCATGAA TGCATTGAGGCCAGTGGCAAACAAGTGGCTCTACTATTGGTAGCCCTGTATACCATAGCTGTGGGTGCTGGAGGAATAAA ATCCAGTGTCTCTGGTTTTGGATCAGATCAGTTTGATACAACAGACCCCCGGGAAGAGAAGAAGATGGTCTTTTTCTTCA ATAGGTTCTATTTCTTTGTCAGTACTGGTTCCTTATTTTCTGTGCTAGTGTTGGTGTATGTGCAAGACAACATAGGAAGA GGGTGGGGATTTGGAATTCCAGCAGGAATAATGTTGGTTTCACTTGCTTTTTTACTCTATGGTAAACCGTTGTATCGATA TAAGAGACCACAAGGGAGCCCTTTAACACTTATATGGAAGGTATTAATCTTGGCTTGGAAGAAGAGGAATCTTCCTATTC CTTCACAACCTTCCTTTCTCAATGGTTACTTTGAAGCTAGAATCCGACATACAGAGAAGTTAAGGTAAACTATATTCCTC TTAATGCATTGAATAGGATTAAGTAAGCACAATTATGACTATGTTTGGATACCCGTTGGTACCAGTGCAAACGGAGGTTA GCACTCCCTTCAAGACCAAAAGTGAACGTAACTCTCCTTATGGATTGGGATGAAAGTCTGTTCACGTTACACTCAGCTGG TATCCAAACACTCACTATATAACTCTTCAATTATTGCACACAATTATAAAACATTATGTTTTATTGTTCTAACAGTGATT TCATTGTCGAAATCTCGATGATTTCATGTTAGTTCGTAATTGTTTTCACTGCACTGCATTTTGTCAGATAGGTTCCTTGA TAAAGCTGCATTCCTTAATGAGAACAGTTCAAAGGATGGAAACAAGGAAAACACATGCATGGTTTCCACTGTAACTCAGG TTGAGGAGGTTAAAATGGTTATCATGCTCTTTCCCATTTGGTCTACATGTATCTTCTTTTGGACAGTTTATTCTCAAGTG AGTACCTTCATCATTCAGCAAGCTAAACTCATGAACAGAAAAGTTGGATCTCTAGATGTCCCAGCAGGATCACTACCAGC TTTTGTCATCATTACCATTCTCCTCCTTACTTCCCTAAATGAGAAACTCACAGTGCCATTGGCTCGGAAATTCACTCACA ATATACACGGGCTCACAAGTCTTCAGAGGATTGGAATTGGACTTGTTTGCGCTACTGTTGCAATGGTGGTTGCAGCAATT GCTGAGAAAGAAAGAAGGGATAATGCAGTCAAAAATCACACTACAATAAGTGCTTTTTGGCTGGTACCTCAGCTTTTTCT AGTGGGTACCGGGCAAGCATTTGCCTATGTTGGACAGCTAGAATTTTTCATCAGGGAGGCACCAGAGGGAATGAAATCTA TGAGCACTGGACTTTTCCTAACTGCAATTTCAATGGGGTATTTTGTCAGTAGCTTATTGGTGTCAATTGTGGACAAATTG AGTAAGAAAAAGTGGCTCAAGAGCAATCTGAACAAGGGAAGGTTAGATTACTTCTATTGGCTGCTAGCTGTGCTGGGAGT ACTGAATTTTATACTCTTTATTGTCTTGGCAATGAGGCATCATTACAAAGTTCAGCACAACATAGAGCCTGAAGACAATG TAGATAAAGTGCTTGTGATTGCAAATGAGGTCAAAATTGGTGTTGATGGAAAGGAAGAAGCATAGAGTATAGTCTTCAAA TAAAAATCTAATTCTATTTGGCCCTACATTGGTGTGCAAGAAGCAAATATCATGCCCCGGGGATGTTAACTTTGGGTGAC TAGCAGAACCTTCTTTTATTATTAAAAGCATGTATTATGTATTATTAAGTAATGACAGATATATAAATGCAAACTAGATT GTAAGTTGTTTCCAAAAGAAATAAGCATTTGGAGAACATCGATTCCCCAACTCTAAATATAAATAAAGAAACTCCTAAAT AGCCTGTTTTCATAAACAAAGGCCAAAATTTGACTAACGAATATAAGTTGAAAAGACTACAAAATTATAAATTCAAACTA AAGCATGATCTTCAAAGCAAGAATTTATCCATTTGAGGCCAAAGTCGCTAACTTCAGCCCTTGATAGGTTCAGTAGCAAG AAGACATAATCTTTAAGACAACAGCAGGCTATTATAAGGTACCAGTAGCCAAAGACGGTTGATGATTTATGACCAATGGA GGACGCAGAGCTCGGTGGGCTTCCTCCTTCTGTTTGCGGGCCTTGTACATCTCCTCTGTCTCAATGACAACTAGCCTCTT GACCTGCACAAATTACCAAGTTTTGCAATGTTACTGTACAGAAAGACCATTAATTTCCAGCAGAAAAGGGACATGTGTAG TAGAGCTTGTATTAGAACCTGTTGGAGCATTCCCCTAACAGTAGGCGTGTTCCATCGCATGACAGTTCGATTGCATTTTC CCAGGCGTAGTGCTTCCAAAGTGCGTCTGTGGAGCCTCCTGGTCCCTGGAATGCCCCTCACCAGAGTTATATAGAGATTT GGGCTCCAAGCAATTGGGACACATGCTTGGTATGCCTTGAATGCATTCATACCTTCAACTTGATCAGACAAAGAGTCACT TCCATTTTGCTGTTTTTGGTGTAAATTTGAAATACAATCAGTTTAAGATTAATAACCAAAATCATTGCAAGTTCCAAACA CCCAAATGAAGAAAGATTCAAAATTTATTGGCCAAACCAATCCCCAGCATCTACAAACCCTGATTCCCATTTCCCAAATC ACCTAAAACAATGTGTGAGAAAAGAGGATGAAGAAGAAGTGGTCATTGAAAATTGAACCTTTGATTGTGAAGAAACTCAC CTGAATTTGGGAAGAACAAGGTGAAGGGTCACAGTGGCAGCGCGGAAGAGCACAATTGAGATTGAGACTCTGGAAGAAAC AGTGTGAGAATTAAAGAGATGAGAAGAACGAAAGAGTCTTCAAAACGCACCGTTTTGGTTTTTTTTTGTCAATCACAGTT TTGGGCTTCAAGGAAATGATAATCATTTGGGCCGGGTTTGTGGTTTTGGACTCTCATAAAATGTTTGACCCGATTCTAAA AATGGAGGTTTCTTTTGCTATCACTGGATTTTAACCTGGATAAATAGAATTTTCAACATTTAAAAAAAAAAAAATTCAAT TTCAGATTGGATTGGGCATTTGGATTTGACAAAGTTAGGTTGATTAATCTAAACTCATGGCCACAAATTAAAAATATTGT TATAGTGAGTTCACATGGGATATGTGGGTATTTTGGCTTTGATTAAATGTTTGTGGGTTGTGGCGGCTAAGAATATGTTT GTGAACTCTCTTTGTGTGGGTTCGTCTCCTATTATTACCATCTTTCAGGGCAAATTTTTAGGATCATATGTCGCTTATAG AGGTATTTACAAATGAGATTAATTTCTATGCACCGACGGTGTAAATAAGTTTTACACCATCATTCAATCATATCCCTCCA TTTTGTTAGCTCACAATTAATTTTGAATTTAATAATATCTAAAATAGAAAAATGGAAGGTTGTGATTGAATGATGGTGTA AAACTTTTTACACCGTCGGTGCATAGAAATTAATCTCTTTACAACTCACCTACCAACATAGCCCTCTCACATCAGTAACG GAAATCGAACACACAACCTTATGAGAGAAAGTGTTTTGTCCTTACCAACTGAGTCAACTTGTCTTAGTGAATTCTCTAAC TTTTAATA
CDS sequence (LotjaGi1g1v0065600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCAAGTTGCAAGCCATGGTGAGAAAAAAGGTGCTGAAGACATTGCTGCCGCCGTGGATTATCTAGGTCGCCCGCC TGACAAATCAAAAACTGGGGGATGGACTGCAGCATGGCTCATCTTAGGTGTTGAGCTGGCTCAAAAAATAATGGTTTTGG GCATATCCATGAACATAGTGACCTACTTGGTTGGAGTTTTAAACCTCCCAACAGCTTATTCTGCCACCATAGTTACCAAT TGCTTGGGAACTATGAACCTGGTTAGCCTTCTTGGTGGCTTCCTAGCTGATGTCAAACTAGGCAGATACCTCACTATTGC TATATCAGCAACCATTTCAGCAGTGGGAATGTGTTTGTTAACTGGGGCTACGACCATTCCAAGCATGAAGGCCCCTCCAT GCAGTAGTGTCCAAAGACAACACCATGAATGCATTGAGGCCAGTGGCAAACAAGTGGCTCTACTATTGGTAGCCCTGTAT ACCATAGCTGTGGGTGCTGGAGGAATAAAATCCAGTGTCTCTGGTTTTGGATCAGATCAGTTTGATACAACAGACCCCCG GGAAGAGAAGAAGATGGTCTTTTTCTTCAATAGGTTCTATTTCTTTGTCAGTACTGGTTCCTTATTTTCTGTGCTAGTGT TGGTGTATGTGCAAGACAACATAGGAAGAGGGTGGGGATTTGGAATTCCAGCAGGAATAATGTTGGTTTCACTTGCTTTT TTACTCTATGGTAAACCGTTGTATCGATATAAGAGACCACAAGGGAGCCCTTTAACACTTATATGGAAGGTATTAATCTT GGCTTGGAAGAAGAGGAATCTTCCTATTCCTTCACAACCTTCCTTTCTCAATGGTTACTTTGAAGCTAGAATCCGACATA CAGAGAAGTTAAGGTTCCTTGATAAAGCTGCATTCCTTAATGAGAACAGTTCAAAGGATGGAAACAAGGAAAACACATGC ATGGTTTCCACTGTAACTCAGGTTGAGGAGGTTAAAATGGTTATCATGCTCTTTCCCATTTGGTCTACATGTATCTTCTT TTGGACAGTTTATTCTCAAGTGAGTACCTTCATCATTCAGCAAGCTAAACTCATGAACAGAAAAGTTGGATCTCTAGATG TCCCAGCAGGATCACTACCAGCTTTTGTCATCATTACCATTCTCCTCCTTACTTCCCTAAATGAGAAACTCACAGTGCCA TTGGCTCGGAAATTCACTCACAATATACACGGGCTCACAAGTCTTCAGAGGATTGGAATTGGACTTGTTTGCGCTACTGT TGCAATGGTGGTTGCAGCAATTGCTGAGAAAGAAAGAAGGGATAATGCAGTCAAAAATCACACTACAATAAGTGCTTTTT GGCTGGTACCTCAGCTTTTTCTAGTGGGTACCGGGCAAGCATTTGCCTATGTTGGACAGCTAGAATTTTTCATCAGGGAG GCACCAGAGGGAATGAAATCTATGAGCACTGGACTTTTCCTAACTGCAATTTCAATGGGGTATTTTGTCAGTAGCTTATT GGTGTCAATTGTGGACAAATTGAGTAAGAAAAAGTGGCTCAAGAGCAATCTGAACAAGGGAAGGTTAGATTACTTCTATT GGCTGCTAGCTGTGCTGGGAGTACTGAATTTTATACTCTTTATTGTCTTGGCAATGAGGCATCATTACAAAGTTCAGCAC AACATAGAGCCTGAAGACAATGTAGATAAAGTGCTTGTGATTGCAAATGAGGTCAAAATTGGTGTTGATGGAAAGGAAGA AGCATAG
Protein sequence (LotjaGi1g1v0065600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVQVASHGEKKGAEDIAAAVDYLGRPPDKSKTGGWTAAWLILGVELAQKIMVLGISMNIVTYLVGVLNLPTAYSATIVTN CLGTMNLVSLLGGFLADVKLGRYLTIAISATISAVGMCLLTGATTIPSMKAPPCSSVQRQHHECIEASGKQVALLLVALY TIAVGAGGIKSSVSGFGSDQFDTTDPREEKKMVFFFNRFYFFVSTGSLFSVLVLVYVQDNIGRGWGFGIPAGIMLVSLAF LLYGKPLYRYKRPQGSPLTLIWKVLILAWKKRNLPIPSQPSFLNGYFEARIRHTEKLRFLDKAAFLNENSSKDGNKENTC MVSTVTQVEEVKMVIMLFPIWSTCIFFWTVYSQVSTFIIQQAKLMNRKVGSLDVPAGSLPAFVIITILLLTSLNEKLTVP LARKFTHNIHGLTSLQRIGIGLVCATVAMVVAAIAEKERRDNAVKNHTTISAFWLVPQLFLVGTGQAFAYVGQLEFFIRE APEGMKSMSTGLFLTAISMGYFVSSLLVSIVDKLSKKKWLKSNLNKGRLDYFYWLLAVLGVLNFILFIVLAMRHHYKVQH NIEPEDNVDKVLVIANEVKIGVDGKEEA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 49 | 49 | - | – | |
| PANTHER | 6 | 574 | 569 | 8.3E-257 | ||
| PANTHER | 6 | 574 | 569 | 8.3E-257 | – | |
| CDD | 35 | 552 | 518 | 0.0 | – | |
| TMHMM | 37 | 59 | 23 | - | – | |
| SUPERFAMILY | 38 | 555 | 518 | 4.97E-23 | ||
| Phobius | 50 | 69 | 20 | - | – | |
| Phobius | 70 | 74 | 5 | - | – | |
| TMHMM | 74 | 96 | 23 | - | – | |
| Phobius | 75 | 96 | 22 | - | – | |
| Phobius | 97 | 102 | 6 | - | – | |
| Phobius | 103 | 123 | 21 | - | – | |
| Pfam | 103 | 516 | 414 | 7.2E-104 | ||
| TMHMM | 103 | 125 | 23 | - | – | |
| Phobius | 124 | 151 | 28 | - | – | |
| TMHMM | 152 | 174 | 23 | - | – | |
| Phobius | 152 | 169 | 18 | - | – | |
| Phobius | 170 | 198 | 29 | - | – | |
| TMHMM | 195 | 217 | 23 | - | – | |
| Phobius | 199 | 218 | 20 | - | – | |
| Phobius | 219 | 223 | 5 | - | – | |
| TMHMM | 221 | 243 | 23 | - | – | |
| Phobius | 224 | 243 | 20 | - | – | |
| Phobius | 244 | 332 | 89 | - | – | |
| Phobius | 333 | 354 | 22 | - | – | |
| TMHMM | 337 | 359 | 23 | - | – | |
| Phobius | 355 | 373 | 19 | - | – | |
| Phobius | 374 | 393 | 20 | - | – | |
| TMHMM | 374 | 393 | 20 | - | – | |
| Phobius | 394 | 413 | 20 | - | – | |
| TMHMM | 413 | 435 | 23 | - | – | |
| Phobius | 414 | 435 | 22 | - | – | |
| Phobius | 436 | 454 | 19 | - | – | |
| TMHMM | 450 | 472 | 23 | - | – | |
| Phobius | 455 | 478 | 24 | - | – | |
| Phobius | 479 | 489 | 11 | - | – | |
| Phobius | 490 | 511 | 22 | - | – | |
| TMHMM | 492 | 511 | 20 | - | – | |
| Phobius | 512 | 530 | 19 | - | – | |
| TMHMM | 531 | 550 | 20 | - | – | |
| Phobius | 531 | 552 | 22 | - | – | |
| Phobius | 553 | 588 | 36 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0065600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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