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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0065700 |
| Transcript ID | LotjaGi1g1v0065700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nitrate transporter 1.1; TAIR: AT3G21670.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9LVE0|PTR33_ARATH Protein NRT1/ PTR FAMILY 6.4; TrEMBL-Plants: tr|D5LQ68|D5LQ68_MEDTR Nitrate transporter NRT1.3; Found in the gene: LotjaGi1g1v0065700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:9074875..9081182) extracted from Lotus japonicus Gifu genome v1.2.
AAAACACCTTGGATAAGTTTGAAATGTAGGGTTGGAGAATTTTAAAGAGTAGATAGATTATTTGAGCAGAGTTCAAGCTA GTTTTTATTTGTTACAAATGGAAGATAAACAACTAACAAACTAATCTAACACGTCCTGACAAAGTAAGGACACTACAAGC CGCTGAAGACAATCTCCACACCCGCCAGTTGCAGCTAACTCGAGTCGCATACTTGGCTAAAGCGTCTGCTACGATGTTTC GCTCCCTAGGAATACCACGTACTGAGTCATTCCAGCTACGACGGAGAAGCTCACAGATTTGATGAATCATGTCCTGATGC CAAAACTGATTCACATCCCCTGACCCTGTAACCACATCAACCAACTCTGCACAATCTGAAAAGCAAACCACACTTCGATA ACCCAGGTCCCCCACACATGCTGCAGCCCCTCAAGGAGAGCTCGAGCTTCTGCTAGGAACGCATCGCCAACTTCAAAAGA TCCTGCAAACCCAGACAACCACCCTCCCGATCACGGACCACCCCGCCCCCGTCGATAGCATTCGAGCCCGGAATCATACT TCCATCTGTGCATAACTCCACCGCCCCTACCTCAATGTTGTCTTGTCCCATCTTTGCTTCCCCGCCAGTCTTAACCATCT TCAAGCGCCCCCATCTTTGGAACTCAACCACTGCAATCTGCACTTTACGAAGCACCAATGCCATGGTCCACGGTTGGGGT TCAAAAATCGCATTATTTCTCCAAGTCCATAAAGTCCACATCACTGCACACGCCAAAGCATGATCTGCATGTTGCAAGTG AGAAACTAGCCATGGACGCAGCGTTGTGGCTGCTGAAACCGATGGCAACAGGGCTCTAAAATGACTCCACACCTGCTGAG CAACTGGACATGAACGCAGGATGTGGTCTACATCCTCAACCTGAGCACCGCAGCGGCCACAAGCAACAGAAGGGGCCAAA TTACACCGGTGTCTTCGTTGATTCGTTGGTAGCGCTTCCCGCACCGCCAACCATAAGAAGAATCGGACCTTCTCAGGAGC TCGACACTTCCAAATCAGCTTCCAGACGCGCGATGATGAAGTATCATTCCCGGTGAGGAGCGCATACGCTGATGAAGTCG AATACCTTCCATTGTTCTCTCCCTTCCATAAAATCTGATCAACACCTGTAGGTTGAGCCGACACCGCCACCCTTCCTATC TCCTCCTTAATCTATGTCGGGAGCTGCGTATAGAGCACTCGAAAATCCCACCTTCCTTGCCGCCATAAGTCTGCCACTCT TAACTCTGTATCTGATATATGCACAAACTGGACTCGCGATGCCAAAATACCTATGCCAAGCCAGTTGCTATACCACAAAG AAGAGCTTCCATCCCCTAGTCGCGCACCATACCCATGTGCCACTGCCATCTTTGCCTTCACGATCCCCCTCCACATATAC GACTCTATGTGCTTGTGCTGTGCTGTTAAAATTGAGGCATCCTTAAGATATTTATCAGACAACACTCTTACCCATAGCTT ATCTTTCTCATGCAACAATCTGTCCACCATCTTCCCCAAAAGAGCCTCGTTATTTGGCCTTGCACTTCTGATTCCCAAAC CTCCCTTGTCTTTTGGCTGTGTAATATCCTTCCATGCAACCAAATTCCAGCTCCTACTACTGTCACATTTGGACCAAATA CAGTTCCTCACCATCTTGTCAACATGATCACATACCGCTTCCGGAAGCCACAAATACAATGCTTGCATTGTATACACCGG CAGCGAGGACAACACGGATAATAAATAAGTATTGTTTTGATTAATTGGTAGCGTATAATCAATGTTTTTTTAGATAAGCA CGTAGAGTCAATGATTGTTTTCATTAAAGTAGGAATACGCTCCTTGTTTAATTACACAATTTTAAGGGAAAAAACACTAA TTCAAACGCGTCCAACTGAGATTCTTCTTAAATAAGGTATTAAGTTTAAGTATTGTATATGAAAATTTCTTCTCTCACTG AAAGAGTTAATCCACATCATGATAAGAATGTTTTCGGCGGGAAAAAAACACCCTACCAATATGGATTCTTCTAAACTCAA AAGCGAAAGCACCCAAACTTTTCACTAAGAACTTAGGCGTTTGGCTACTAAGAGCATCTACATCCATTATACTCACTAAA ATATCGAAACTTTATTTTGAGCCGTATCTTCATTCAATTGCTAATCATGATCATTACTTCATCAAGCATGAAGGGTTAGA TATAACCACATGGTCGTATAGATGCTTTTCTTTTTGTAGTTGTACATTCTGAATGTGACTACATGAATGAGGCAAGTTAG GAGCTCAATTAGGAATTCAAGTCCCTATCACTTTCAGTGTTGTTTTCATTAGGCCCTGAGCCACACAACGCTGCTCTATA TAACTCCAAAACATTCAGACATATACCTGCATATTCAGCACTTTGAACCACTCATTGCAAACGAGTGGACCAATTTCAAG ATAGCCATGCTTAACATGTTATCAAACTCTTTTGCATAACATATCTGACCCTGCATTCCTCACCACTGGTATTGGCATTT GTCACCCTTGGAGCTTCGACACATACACATATCCAACTCTTCAAAGTAATCCCTCCAACAAAACAAAAAACATGGTATTG CCTTCATCTGCAAGAACTTTTGCTGTTGTTCAAAGCTTAAACTTTGTTAATGTCTCGGCACATGTTTGAAAATCCTTCTA GAATTGATTCTAAAGCCAAAACTAATTCTAGGGAAAAGCTTCAGTGAGTCTGGAATCTGGAGTTCAAACATGCTACTAAT GGTTTTGTTTTTCTGCACCACCAATTTTATAGGTTATGGTTGCAAGTAATGGCGAGAAAAAGGAAGCAGAAGATGCTGTG AATTTCCGAGGTCACCCGGCTGACAAGTCCAAAACTGGAGGGTGGCTAGCAGCAGGGCTCATCTTAGGTTCTTATTAATC CATTGAAATTGGGTCACAATTTCAAGGTTGAACTTTATTTGGCTCCAACACATGTATATACTTCTTTTATGCAGGTACTG AACTAGCAGAAAGAATATGTGTTATGGGCATATCCATGAACTTGGTGACCTATTTAGTTGGAGATTTGCATCTCCATTCA GCTAACTCTGCCACCATAGTTACCAATTTTATGGGAACTCTGAACCTTCTTGGTCTCCTTGGTGGCTTCCTAGCTGATGC TAAACTTGGCAGATACCTCACTGTTGTTATATCAGCAACCATAGCTGCAGTGGTAAGTTTAGTTTTTCCAATTTTTTGTT TATAAGAACACTATGGTAACCAACTTTCTACCTTCACCAAACATCTTTCTCTATGGTATTCACAAATTTGTTTGATTCCC TTGTCAGTATCCTAAATTTAAAAATGGTTTTAAGAATCAATTTTTAAAACATGTTATTCAGAAGTAAAGAAAATAAAAAC GGTTTGAGCAACATGTTTTTCAAAGCTAAAAGACCTACAACTTGAAAACTAAAAACTAAAATACAAAACATCTCTCAGCT GTTTCCAGATTTCGGTTCTAAGGACTGAAAATAATAATCATTTTTAAGTTGTTCATAACAAATGAGTTATTTTCTTTTTC TATTTTTAAAAAGTGAAAATTTGTTTTGCCAAACAGTAATCAAACAGATCATAATTCTCATGTCACTTTTCTTGCAACAG GGAGTGTTTTTGTTAACTCTGGCCACAACCCTTCCTTCCATGATTCCCCCTCCATGCAGTGCAGTCAGAAGACAACACCA TGAGTGCATTGAGGCCAGTGGCAAACAGTTATCTTTGCTATTTGCAGCCCTTTACACCATAGCAGTGGGTGGTGGAGGGA TAAAATCCAATGTCTCAGGCTTTGGATCTGATCAGTTTGACATAACAGATCCCAAGGAGGAAAGGAATATGATCTTTTTC TTCAACAGATTCTACTTCTTTATCAGTATTGGGTCCTTATTCTCTGTGATAGTGCTGGTATATGTGCAAGACAACATAGG AAGAGGGTGGGGATATGGAATTTCAGGTGGAACAATGTTGGTTGGTGTTGCTGTTTTGCTTTGTGGTACCCCAATCTACA GATTCAAGAAGCCTAGAGGGAGTCCTTTAACAGTTATTTGGAGGGTATTGATTTTGGCTTGGAAGAAGAGGACCCACCCT ATCCCTTCACAACCTACCTTGCTCAATGGTTACCTTGAATCCAAAGTCCCACATACAGAGAGGCTCAGGTAAAATATCTT CCTCTTAAAGCCTTCAATAAGTTAGATTCTAGCATGATTATATTTATCTTCAATTATTTCATAGCAATAATTGCAAACTC ATAACTTTATTAGGATTATTATAATTACTATTGGTGGGTGGAAAAGTGTTTTATAGTAGGTTATATTATCTTTTGATGTT GTCTGTCCAGAAAAGGACAAATGTTACAGTTGCTTAGTAAGCATTCTATCAAAAAACAAAAAAACACAAATTTACTTGCA CTCCTACAAAATACCACAAATCTTGAATCATCATATAGTTTCATTGAATTGATTCTGCGTGAAAAAGTTGGAAACAACTT ATGTAGTTATAGTGTCATTCATATTCTATGAAAATTAGGAAATTTCTGAAAGCTCATAATCAATTCTCATTGACTAAAAC CAGTTTTAAATAACGATGTAGATGTTTGAGTGTCATCTTGTAGAATTGATTTCAGACTAAACAATTTTACGTAGAAGCTA GAAAGAGTAACTTTTACGTTAAACATATCAATTGTAGTTTTTATAATTGAATTTCACAACATTACCCTTGCAAAAGTCAA ATTTTTTTATAAATGTATCCGAACGTAAATCATATTACTTTCAACTCACTTCAAAACACTTTTATAATAATCAATTTTGA CACACCAATTTTATAAAAAAAATTATTGTGACAATACTGATCCAAACAATAGCTGAAATTATATTTATTCAAACCCAACC AGAAAGACTTGAGATTTTGTCTGACAGGTATTTTCATTGCATGGAATTTTTTCTAACAGGTTCCTTGACAAAGCTGCAAT CCTAGATGAGAACAGCTCAAAAAATGGAAGCAAGGAAAACATATGGATGGTTTCCACTGTAACTCAGGTTGAGGAGGTTA AAATGGTAATCAAGCTCCTTCCAATTTGGTCTACATGCATCCTCTTTTGGACAGTCTATTCTCAAATGAACACCTTCACC ATTGAGCAAGCTACATTCATGAACAGAAAGGTTGGATCTGCAGAGATCCCAGCAGGATCCCTATCAGCTTTTCTCATTAT AACCATTCTCCTCTTCACTTCCCTGAATGAGAAACTCATTGTGCCATTAGCTAGGAAACTTACCGACAATGTCCAAGGAC TCACAAGTCTTCAAAGGGTTGGAATTGGACTTGTTTTCTCTTTTGTTGCCATGATGGTTTCTGCAATTGTTGAGAAAGAA AGGAGGGAAAATGCTGTTAAGAAACACACTAACATAAGTGCTTTTTGGCTGGTTCCTCAGTTTTTTCTGGTGGGAGCAGG GGAAGCATTTGCTTATGTTGGACAGCTAGAATTTTTCATCAGGGAGGCACCAGAGAGGATGAAATCTATGAGCACTGGAC TTTTCCTAGCTACACTTTCAATGGGGTATTTTGTCAGTAGCTTATTGGTGTCAATTGTGGACAAAGTGAGTAAGAAAAAG TGGCTCAAGAGCAATCTAAACAAGGGAAGGTTAGATTACTTCTATTGGCTGCTAGCAGCACTGGGAATTCTGAATTTTAT ACTCTTTATTGTCTTGGCAAGGAGGCATCAGTACAAAGTCCAGCACAACATTGAGCCTGAAGACAGTGTAGATAAAGAGC TTGTGATGGCAAATGAGGTCAAAATTGGAGTTGATGGAAAGGAAGAAGCATAGTCTATATAGTTTTCATCAAAAACTCAT TTTGTTTGGCATCATATATGGTGTGCAAGAAGTAAAAGTCATATCATACCTCATGTCTGTTAATTTTGGGTGATTAGGGG ATTTTTTTTTTGGCCAAGCCAATTGTTATGCTGTATTAAGAGTGCGTTTAAAAGGGCTCACTGGAGCTTACTCTACATTA TAAATACTAATGCGAGTGTTTGGGTAAAAGTATGAAAATATCTTATAACCAGTGTCTGAAATTGTTGTCCACAACCACAA TTACGGTTGTAACTTGTAATGTAAACGGTTTTAGAGTCCCACAACGGCAACACGACCGAAATTATGGTCATGTCAACCCA CATTTGTCTACAACGCAATTGCAACCGCAATTTAATTTGAATTTCTTTCATATACTTTTCAAATAAGC
CDS sequence (LotjaGi1g1v0065700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTATGGTTGCAAGTAATGGCGAGAAAAAGGAAGCAGAAGATGCTGTGAATTTCCGAGGTCACCCGGCTGACAAGTC CAAAACTGGAGGGTGGCTAGCAGCAGGGCTCATCTTAGGTACTGAACTAGCAGAAAGAATATGTGTTATGGGCATATCCA TGAACTTGGTGACCTATTTAGTTGGAGATTTGCATCTCCATTCAGCTAACTCTGCCACCATAGTTACCAATTTTATGGGA ACTCTGAACCTTCTTGGTCTCCTTGGTGGCTTCCTAGCTGATGCTAAACTTGGCAGATACCTCACTGTTGTTATATCAGC AACCATAGCTGCAGTGGGAGTGTTTTTGTTAACTCTGGCCACAACCCTTCCTTCCATGATTCCCCCTCCATGCAGTGCAG TCAGAAGACAACACCATGAGTGCATTGAGGCCAGTGGCAAACAGTTATCTTTGCTATTTGCAGCCCTTTACACCATAGCA GTGGGTGGTGGAGGGATAAAATCCAATGTCTCAGGCTTTGGATCTGATCAGTTTGACATAACAGATCCCAAGGAGGAAAG GAATATGATCTTTTTCTTCAACAGATTCTACTTCTTTATCAGTATTGGGTCCTTATTCTCTGTGATAGTGCTGGTATATG TGCAAGACAACATAGGAAGAGGGTGGGGATATGGAATTTCAGGTGGAACAATGTTGGTTGGTGTTGCTGTTTTGCTTTGT GGTACCCCAATCTACAGATTCAAGAAGCCTAGAGGGAGTCCTTTAACAGTTATTTGGAGGGTATTGATTTTGGCTTGGAA GAAGAGGACCCACCCTATCCCTTCACAACCTACCTTGCTCAATGGTTACCTTGAATCCAAAGTCCCACATACAGAGAGGC TCAGGTTCCTTGACAAAGCTGCAATCCTAGATGAGAACAGCTCAAAAAATGGAAGCAAGGAAAACATATGGATGGTTTCC ACTGTAACTCAGGTTGAGGAGGTTAAAATGGTAATCAAGCTCCTTCCAATTTGGTCTACATGCATCCTCTTTTGGACAGT CTATTCTCAAATGAACACCTTCACCATTGAGCAAGCTACATTCATGAACAGAAAGGTTGGATCTGCAGAGATCCCAGCAG GATCCCTATCAGCTTTTCTCATTATAACCATTCTCCTCTTCACTTCCCTGAATGAGAAACTCATTGTGCCATTAGCTAGG AAACTTACCGACAATGTCCAAGGACTCACAAGTCTTCAAAGGGTTGGAATTGGACTTGTTTTCTCTTTTGTTGCCATGAT GGTTTCTGCAATTGTTGAGAAAGAAAGGAGGGAAAATGCTGTTAAGAAACACACTAACATAAGTGCTTTTTGGCTGGTTC CTCAGTTTTTTCTGGTGGGAGCAGGGGAAGCATTTGCTTATGTTGGACAGCTAGAATTTTTCATCAGGGAGGCACCAGAG AGGATGAAATCTATGAGCACTGGACTTTTCCTAGCTACACTTTCAATGGGGTATTTTGTCAGTAGCTTATTGGTGTCAAT TGTGGACAAAGTGAGTAAGAAAAAGTGGCTCAAGAGCAATCTAAACAAGGGAAGGTTAGATTACTTCTATTGGCTGCTAG CAGCACTGGGAATTCTGAATTTTATACTCTTTATTGTCTTGGCAAGGAGGCATCAGTACAAAGTCCAGCACAACATTGAG CCTGAAGACAGTGTAGATAAAGAGCTTGTGATGGCAAATGAGGTCAAAATTGGAGTTGATGGAAAGGAAGAAGCATAG
Protein sequence (LotjaGi1g1v0065700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVMVASNGEKKEAEDAVNFRGHPADKSKTGGWLAAGLILGTELAERICVMGISMNLVTYLVGDLHLHSANSATIVTNFMG TLNLLGLLGGFLADAKLGRYLTVVISATIAAVGVFLLTLATTLPSMIPPPCSAVRRQHHECIEASGKQLSLLFAALYTIA VGGGGIKSNVSGFGSDQFDITDPKEERNMIFFFNRFYFFISIGSLFSVIVLVYVQDNIGRGWGYGISGGTMLVGVAVLLC GTPIYRFKKPRGSPLTVIWRVLILAWKKRTHPIPSQPTLLNGYLESKVPHTERLRFLDKAAILDENSSKNGSKENIWMVS TVTQVEEVKMVIKLLPIWSTCILFWTVYSQMNTFTIEQATFMNRKVGSAEIPAGSLSAFLIITILLFTSLNEKLIVPLAR KLTDNVQGLTSLQRVGIGLVFSFVAMMVSAIVEKERRENAVKKHTNISAFWLVPQFFLVGAGEAFAYVGQLEFFIREAPE RMKSMSTGLFLATLSMGYFVSSLLVSIVDKVSKKKWLKSNLNKGRLDYFYWLLAALGILNFILFIVLARRHQYKVQHNIE PEDSVDKELVMANEVKIGVDGKEEA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 42 | 42 | - | – | |
| PANTHER | 15 | 571 | 557 | 3.8E-288 | ||
| PANTHER | 15 | 571 | 557 | 3.8E-288 | – | |
| SUPERFAMILY | 23 | 556 | 534 | 4.71E-33 | ||
| CDD | 32 | 549 | 518 | 0.0 | – | |
| Phobius | 43 | 62 | 20 | - | – | |
| Phobius | 63 | 73 | 11 | - | – | |
| TMHMM | 71 | 93 | 23 | - | – | |
| Phobius | 74 | 93 | 20 | - | – | |
| Phobius | 94 | 98 | 5 | - | – | |
| Phobius | 99 | 120 | 22 | - | – | |
| Pfam | 100 | 514 | 415 | 2.9E-108 | ||
| TMHMM | 100 | 122 | 23 | - | – | |
| Phobius | 121 | 195 | 75 | - | – | |
| TMHMM | 149 | 171 | 23 | - | – | |
| TMHMM | 191 | 213 | 23 | - | – | |
| Phobius | 196 | 215 | 20 | - | – | |
| Phobius | 216 | 220 | 5 | - | – | |
| Phobius | 221 | 245 | 25 | - | – | |
| TMHMM | 223 | 245 | 23 | - | – | |
| Phobius | 246 | 333 | 88 | - | – | |
| TMHMM | 334 | 356 | 23 | - | – | |
| Phobius | 334 | 351 | 18 | - | – | |
| Phobius | 352 | 370 | 19 | - | – | |
| Phobius | 371 | 390 | 20 | - | – | |
| TMHMM | 371 | 390 | 20 | - | – | |
| Phobius | 391 | 410 | 20 | - | – | |
| TMHMM | 410 | 432 | 23 | - | – | |
| Phobius | 411 | 432 | 22 | - | – | |
| Phobius | 433 | 451 | 19 | - | – | |
| TMHMM | 447 | 469 | 23 | - | – | |
| Phobius | 452 | 475 | 24 | - | – | |
| Phobius | 476 | 486 | 11 | - | – | |
| Phobius | 487 | 508 | 22 | - | – | |
| TMHMM | 489 | 508 | 20 | - | – | |
| Phobius | 509 | 527 | 19 | - | – | |
| Phobius | 528 | 548 | 21 | - | – | |
| TMHMM | 528 | 547 | 20 | - | – | |
| Phobius | 549 | 585 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0065700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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