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LotjaGi1g1v0067200.2

Overview

Field Value
Gene ID LotjaGi1g1v0067200
Transcript ID LotjaGi1g1v0067200.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description 1-aminocyclopropane-1-carboxylate oxidase; TAIR: AT1G05010.1 ethylene-forming enzyme; Swiss-Prot: sp|Q9MB94|ACCO_PRUMU 1-aminocyclopropane-1-carboxylate oxidase; TrEMBL-Plants: tr|A0A0L9UW87|A0A0L9UW87_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0067200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:9263519..9265094) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCCAACTTTCCAGTGATCAGCTTGGAGAAGCTCAATGGTGAGGAGAGAAAAGATATCAAGCTGCAAATAAAGGATGC TTGTGAGAACTGGGGATTCTTTGAGGTACCTTGTTGATTTCTACATTGCCCTCCAACTTATCTGTGTTTTAATTTCTTTT AGTTCTTGTGATTTTCTAGCTGACTCTGCTTATTCTTTGCTTTCAAAACTCTAGCTGGTGAATCATGGCATACCCCATGA CGTAATGGACACTGTGGAGAGGTTGACCAAAGAGCACTACAGGATATGCATGGAACAGAGGTTCAAGGAATTAATGGCAA GCAAAGGCCTAGAGGCTGTCCAAACTGAAGTCAAAGATATGGACTGGGAGAGTACTTTTCACCTGCGCCACCTCCCTGAA TCAAACATTTCAGAGATCCCTGATCTCACTGACGAGTACAGGTTACACACAACAAAAAAACATTTATGAGATAACACATT GCATGACATATAATACAAAAATTCACAAATAATTGATACAGAATCAGGTCTAATCCGAATTCTAAGATGGTATCAAAACT TATACTAGAGATGTGACCAATAGAGTCTCTATAAAGGGTAGAACAATCATCACTTATGAGCTAACTTTTGGCCTAACATG AATTCTAAGAGATTATGAGTTGAACTCCAATCCACATAGGAGCAGCATTTGTTGAGTTTTGAACACTGTTTCATATATGA TTTTACTTTCACTAGTATCTACAAACAACCAAATAATGGATTAAAAATTAAAAATACAAGATGGACACATGTGCATTCTA AAGTAAAACTGCAGCTGTATATTTCACTTCCCAAAGATTCTAAATTACTCAAGGTAATGATGCAGGAAGGTGATGAAGGA CTTTGCTTTGAGGATTGAGAAGCTATCAGAGGATCTGTTGGACTTATTGTGTGAGAATCTTGGACTGGAGAAAGGGTACC TCAAGAAGGCCTTCCATGGATCAAGAGGACCAACTTTTGGCACCAAGGTTGCCAACTACCCTCCATGCCCCAAGCCAAAC CTGGTGAAGGGTCTCCGCGCCCACACCGACGCCGGCGGGATCATCCTTCTCTTCCAGGATGACAAGGTCAGTGGCCTGCA GCTGCTCAAAGATGGCGAGTGGGTGGATGTTCCCCCAATGCGCCACTCCATTGTTGTCAACCTTGGTGACCAGCTTGAGG TAAATTCTCTCTTCCTATGCCTTATAGACATTTCCACAAACAGGTTATGTGCAAAATCATGACCCTTATCAAATGGGAAC AACAGGTGATCACCAATGGGAAATACAAGAGTGTGGAGCATCGTGTGATAGCACAAACTGATGGGACCAGAATGTCTATA GCCTCATTCTACAACCCTGGCAGTGATGCTGTCATCTACCCTGCTCCAGAATTGTTGGAGAAAGAGGCAGAGGAGAAAAA CCAGCTCTACCCAAAATTTGTTTTTGAAGATTACATGAAGCTCTATGCTGGATTGAAGTTTGATGCCAAGGAACCAAGAT TTGAGGCCCTGAAAGCATCACCAAATGTGACTCTAGGTCCAATTGCCACTGCTTAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0067200.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCCAACTTTCCAGTGATCAGCTTGGAGAAGCTCAATGGTGAGGAGAGAAAAGATATCAAGCTGCAAATAAAGGATGC TTGTGAGAACTGGGGATTCTTTGAGCTGGTGAATCATGGCATACCCCATGACGTAATGGACACTGTGGAGAGGTTGACCA AAGAGCACTACAGGATATGCATGGAACAGAGGTTCAAGGAATTAATGGCAAGCAAAGGCCTAGAGGCTGTCCAAACTGAA GTCAAAGATATGGACTGGGAGAGTACTTTTCACCTGCGCCACCTCCCTGAATCAAACATTTCAGAGATCCCTGATCTCAC TGACGAGTACAGGAAGGTGATGAAGGACTTTGCTTTGAGGATTGAGAAGCTATCAGAGGATCTGTTGGACTTATTGTGTG AGAATCTTGGACTGGAGAAAGGGTACCTCAAGAAGGCCTTCCATGGATCAAGAGGACCAACTTTTGGCACCAAGGTTGCC AACTACCCTCCATGCCCCAAGCCAAACCTGGTGAAGGGTCTCCGCGCCCACACCGACGCCGGCGGGATCATCCTTCTCTT CCAGGATGACAAGGTCAGTGGCCTGCAGCTGCTCAAAGATGGCGAGTGGGTGGATGTGATCACCAATGGGAAATACAAGA GTGTGGAGCATCGTGTGATAGCACAAACTGATGGGACCAGAATGTCTATAGCCTCATTCTACAACCCTGGCAGTGATGCT GTCATCTACCCTGCTCCAGAATTGTTGGAGAAAGAGGCAGAGGAGAAAAACCAGCTCTACCCAAAATTTGTTTTTGAAGA TTACATGAAGCTCTATGCTGGATTGAAGTTTGATGCCAAGGAACCAAGATTTGAGGCCCTGAAAGCATCACCAAATGTGA CTCTAGGTCCAATTGCCACTGCTTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0067200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MANFPVISLEKLNGEERKDIKLQIKDACENWGFFELVNHGIPHDVMDTVERLTKEHYRICMEQRFKELMASKGLEAVQTE VKDMDWESTFHLRHLPESNISEIPDLTDEYRKVMKDFALRIEKLSEDLLDLLCENLGLEKGYLKKAFHGSRGPTFGTKVA NYPPCPKPNLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVITNGKYKSVEHRVIAQTDGTRMSIASFYNPGSDA VIYPAPELLEKEAEEKNQLYPKFVFEDYMKLYAGLKFDAKEPRFEALKASPNVTLGPIATA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:2.60.120.330
2 300 299 1.3E-107
IPR027443
PANTHER
PTHR10209:SF533
3 280 278 2.5E-141 –
PANTHER
PTHR10209
3 280 278 2.5E-141 –
SUPERFAMILY
SSF51197
3 285 283 1.58E-84 –
Pfam
PF14226
5 96 92 7.9E-14
IPR026992
ProSiteProfiles
PS51471
153 236 84 10.494
IPR005123
Pfam
PF03171
159 236 78 3.3E-14
IPR005123

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0067200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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