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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0072400 |
| Transcript ID | LotjaGi1g1v0072400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-soluble NSF attachment protein; TAIR: AT3G56190.1 alpha-soluble NSF attachment protein 2; Swiss-Prot: sp|P93798|SNAA_VITVI Alpha-soluble NSF attachment protein; TrEMBL-Plants: tr|A0A151U1H4|A0A151U1H4_CAJCA Alpha-soluble NSF attachment protein 2; Found in the gene: LotjaGi1g1v0072400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:10173242..10177905) extracted from Lotus japonicus Gifu genome v1.2.
CTTGACCGAAATAACCGAAAGAGCGCAATAAGGGACAACCGAGTGAAACCATTTTCGGAGAAAAAGAACCAAAATTTGAC AACAATTCTCTTCTCTGTGAAACGAAAACAAACATCGTTTCGTTGTGTTCTGTTCTGTTCTATTGCGCCTTCATTCCCTG ATTCAAATCATCTTTGTGCGTGTAAATTTGCATGATCGAAACAGCAAATAGCGAATCGAATTGATCGATTTTTCTTGCAT TGGTTGAAAACATGGGCGATCAGTTAGCTAAGGCGGAGGATTTCTTGAACAAGGCGGAGAAGAAGCTCAGCGGTTGGGGT TTGTTTGGCTCCAAATTTGAGGATGCTGCTGAGCTTTTCGATAAATCGGCTAATTCCTTCAAGCTCGCCAAATCATGTAA TGTTTTCTTCAATTCATTGATCAAATTGCGTTTTGTATGAGGTTAATTGTGAATTTGTGACCATCGTTGAATGTAGTTGT TGTTGTTGGATGAGGTTATGGGGATGAATTTGATAATTTGTTTTTAGGTTTTGTGAAATTGTGTTTGGATTATTATAGCT TTTGAATTTTGATTGTGATGAATGATCATGATGGTGAATTGGTGATGATGATGATGATATTTCAGGGGATAAAGCAGGAT CAACCTACATCAAGTTGGCGAATTGTCATTTAAAGGTGACTCCTTTTTTTCTGGGGGGATTTTTTATTTTTTTTTTGGTT TCTCTCTCTCTTTTTCCTAACCCTGTAATGGTGTCTTTTGATTCTAGTTGGAAAGCAAGCATGAAGCTGCTCAAGCTTTT GTTGATGCTGCACATTGCTATAAAAAAACCAATATAAATGGTATGTATATATGTATTACTATCGGTGTTGCTACTCCGCT ATTTTCCGCTTTAAGAGGCTGGAAATAGCGGATTTTTGGCTTACCACTGTAGTCTGCGATCTGCGATTAACAACACTGTT ACTATCCATGCACCATGCATGTATGTGTCTGGGTATAAGTATATGCTTATTTACATGCACTAGGATTCATTTCTGGTAAT ATGCTATGCACTTGGGCTGATAAGTGATTGATGGATGGTGTGAAATGTGAATTCATAACTTGTTGATTATTGTTTTGCCA TCTTTGTTCTTTCACTCGTTTTTGAATTCTGATTACTGCTCTCAATGGTCCTAGTGCCTCCTTGAAGCGAGGTCAATTCC TTGTGGTCTTAGTGGTTTTATGTGTAAGTTATAATCCAAATCATATTCCTTTGTCCATGATCAGACATCAGATAATATTA AAAAACTTTTTTGTCTTGTTATTCAAGATTTCTGTCTGTAAAAATCAGATAAGTAGTATGGGTCCGTACCTTCATGTAGT CTAAAATTAAGTAGTATATATGTGTAAATAGTTGAAATCTAGGAAGCACCAACACTTTGAAAGAGTAGCAGTGTCGTGTT GTATCCATGCTGCGCACTCCACAGACACTTCTACTTGTATTTTACGATTTTTCCTACTTCTTTTGAACTTTTATGCCAAT ACAGATGGAAATGCCACAAGAATTTGGTAAATAATAGCATTTTATTATGTCCATCACTCGTGCTAGCTTTTAGATATTAA TTCTCTCTTTGGATTTGAAAGGAATTTGTATTTTTATATTAATTTCATACTAATTGTGTCCATTGTATTACGGAGGTGTC ATGTCCTATAATTTTCAGCATTTATCGTGTTCCTGTGTCCATGTCGTGTCGTATTTGTGTTACTTGCTTTTTAGGTTGAA ATCCATCAGCCTTTTTTTATGGTGGTTATATGCTTACCACTTTTAAAGTGGAATTGATTATAAATCCAGGAAGCATGTGG TAGCATGCTATCTTTTGCATTAAGATGAAGACAATAGAACTTTTGATATTGAGCTTCTTTTTTCCCTGTTAATGCAGAGG CTGTGTCTTGTTTAGACCAAGCTGTAGATAATTTCTGTGAAATTGGAAGAATCTCTATGGCTGCTAGATATTTGAAGGTA TATATCACTATAACTTCACTTTTTTTCTTAGTCTGATCGGTTAAATTAAATTTCTCGGATTACACGCTATTCTTCTTGGC CATCTTATCCTTTCTGAGGCATTCTGAGTACAGGAATCTCAATAAAACATGTCAAAATTGAGTTTTACTTTTGTGTACGC AGGAAATTGCTGACTTATATGAGTCCGAGCAGAATATTGCACAGGCCATTGTTTACTATGAAAAATCAGCTGATTTTTAT GAAAGTGAAGAAGTGAACACTTCTGCGAACCAGTGCAAGCAAAAAGTTGCTCAGTTTGCTGCTCAGCTTGAACAGTAAGA TTTTTCTATTTTCTGCTTCTTCCCTTTTTTGTCACTGTGAAGGCCTCAATGATAGTGCTTGAACATGGTTTTCTTCTCTC TATGTTGTTTCCTTACTAGTTTGATATATAATCTTAACAGAACAATAACATTTCATATGGTGTTAAAAGCATTAGATGCT TGCTGCATTTCATCTTATTCATATGTTGAAGGATATGGTGTTTTTAAATTAAAGCAGGAACTGCTAGAATAATGTCAAGA AAGAAATAATTTATTGCAGAAAAAAACTTTATCATAGCATTCCCTTTATGGTAAAATGAATGTGAACTGTTAACATTTTT ATAATTGTCCAGATATCAGAAGTCAATTGTGATTTATGAAGATATAGCTCGCCAGTCTCTCAACAACAATTTGCTGAAGT ATGGAGTTAAAGGACACCTTCTTAATGCCGGCATTTGCCAACTTTGTAAAGGGGATCATATTGCTATTACCAATGCATTA GAGCGATATCAGGTCTAGTGTCTTTTCTAGAATTTACATCTCGAGACTGTGATCATTGTCAGTTACTAAATTTCTTGGCT GTGTATTTGTTTTTGCAGGAACTGGATCCAACATTTTCAGGAACACGTGAATATAGACTTTTGGCGGTATGTTTCAAGCT GTGGAATTTCATTATAAAACACAACATGGGGACTTTTCAATAACTGCCTCCTCTATTATTATGCTCTTATTTGCATTTGA TATTTATTCTAGCATATAATTATAGCATTATCCGATTCTGTATTCAGATATTTGCCAGATGATGTGCTAACTTTTAATAC AAAAAATGGCAGGATATTGCTGCTGCTGTTGATGAAGAAGATCTTGAAAAGTTTACTGTTGTTCTCAAGGAGTTTGATAG CATGACTCCTCTGGTAAGCTCCAAATTATTGAAGAACGAGACAATCTTTAGATCTGTATTCTTATAGCCGAATACACATT ATAATTGAATTGCCCAATTTACTTCAATTTAATATTATGTTTTCACTCATTTGTATCTGCTTCAAATTTCCCCTTGAAAA ATGTGTAAACCTTTTAATTTAATTTCTAAGAGAGATACGTAGCAGGAGACTACTTTTAACTAGTTCATAACTTTCTCTCC CTTTCTAATTTGCTCAAATTCTATAATTGTGAAATATATAGTGATTGTAAAATATGGATCAGACATTTCATCAAATTCTG CAGTTTTATTTTGCGAAAAGAGATCTAGGAAAACTGAGTATCAATATTTTTGTCTTTGTAAATATGTAGAACTGTTGTGG CATGAACTCCTTGTTCCTGTCATTCCTCTTTTGCATTCCATAAATAGTTCTACTCTCAATATTTCATTCACATTGTCTAT GCCCATGAATATTGTTCAGGACTCTTGGAAGACAACACTTCTCTTGCGGGTGAAGGAAAAGCTGAAAGCCAAAGAACTTG AGGAGGATGATCTTACATGAATTGAACCTGCCTTAGTCTTCTGTCTATTGGACTTCGTGTTTTGGTGATGTGTCCTACAT TATGCTTGTATGTGCAGTTATTCATCTTTCATATTATTGTACTAATATGAAGTGTACTTGCTTTGGGTTTCGATTGATGT GGTCTTGTATGAATTCTTGAAATGAGTTTGTTGAGAGGTTAGAGTCCTACCTGATCCACTTTCATTGGATTAGCATGCCA CGGCTACAGGGTGTTGTCAACTTATCATAAAAATATGTTATTATTAATAGCAGCTTATTTGGAAGGAGGATTAAAAACCT CCATCATTGATGGATCAATAGAATGTCTCAGGCTACTATTTACATTTAACCTGTGTCATTTTGATCCTTTCTGAATAATT GCATATGTGGAATGGAAGCAAGAGAGCTTCCATCATTATTGTTTTTATGGATCAGTGGGTTGGCCATTAGGTATGCAATA TTTTTGTGTTGCTTTTGGGGTCCAAACGAGTTATTGTTTGCTGAGTTTTTTGGAAGAATATAAATTGAGGATTACTTGTA GCGCTAAAGACTGTAATTTACAGGACATCACTTGAGTATGTGTTTATCTGTTTTATTTTTGGAAAATGATCATGAAACGT CCACATAGTGTAAATGTCCAAGAGACACCCGGAGTGAGAAAATAAGAGATCAGAGAGAAGTAATTGATGTGACATATGTA AGGAGAGAGATGGATAGAAAAATGTGGTGTCTTTGTGTGGATGTACTATTTGTATGTTCAAGCATAATTTTGTTTATTTT TTAGAGGTCAAATAAGTTCTTGGTCCCGTAAAATGAACGAGATTTGTTTTTAGCCGTTCACTGGAGTAAAAGCTAGAAAA AGTGAAAAACATCCTTGCCTTGGG
CDS sequence (LotjaGi1g1v0072400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCGATCAGTTAGCTAAGGCGGAGGATTTCTTGAACAAGGCGGAGAAGAAGCTCAGCGGTTGGGGTTTGTTTGGCTC CAAATTTGAGGATGCTGCTGAGCTTTTCGATAAATCGGCTAATTCCTTCAAGCTCGCCAAATCATGGGATAAAGCAGGAT CAACCTACATCAAGTTGGCGAATTGTCATTTAAAGTTGGAAAGCAAGCATGAAGCTGCTCAAGCTTTTGTTGATGCTGCA CATTGCTATAAAAAAACCAATATAAATGAGGCTGTGTCTTGTTTAGACCAAGCTGTAGATAATTTCTGTGAAATTGGAAG AATCTCTATGGCTGCTAGATATTTGAAGGAAATTGCTGACTTATATGAGTCCGAGCAGAATATTGCACAGGCCATTGTTT ACTATGAAAAATCAGCTGATTTTTATGAAAGTGAAGAAGTGAACACTTCTGCGAACCAGTGCAAGCAAAAAGTTGCTCAG TTTGCTGCTCAGCTTGAACAATATCAGAAGTCAATTGTGATTTATGAAGATATAGCTCGCCAGTCTCTCAACAACAATTT GCTGAAGTATGGAGTTAAAGGACACCTTCTTAATGCCGGCATTTGCCAACTTTGTAAAGGGGATCATATTGCTATTACCA ATGCATTAGAGCGATATCAGGAACTGGATCCAACATTTTCAGGAACACGTGAATATAGACTTTTGGCGGATATTGCTGCT GCTGTTGATGAAGAAGATCTTGAAAAGTTTACTGTTGTTCTCAAGGAGTTTGATAGCATGACTCCTCTGGACTCTTGGAA GACAACACTTCTCTTGCGGGTGAAGGAAAAGCTGAAAGCCAAAGAACTTGAGGAGGATGATCTTACATGA
Protein sequence (LotjaGi1g1v0072400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDQLAKAEDFLNKAEKKLSGWGLFGSKFEDAAELFDKSANSFKLAKSWDKAGSTYIKLANCHLKLESKHEAAQAFVDAA HCYKKTNINEAVSCLDQAVDNFCEIGRISMAARYLKEIADLYESEQNIAQAIVYYEKSADFYESEEVNTSANQCKQKVAQ FAAQLEQYQKSIVIYEDIARQSLNNNLLKYGVKGHLLNAGICQLCKGDHIAITNALERYQELDPTFSGTREYRLLADIAA AVDEEDLEKFTVVLKEFDSMTPLDSWKTTLLLRVKEKLKAKELEEDDLT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 289 | 289 | 7.6E-184 | – | |
| PANTHER | 1 | 289 | 289 | 7.6E-184 | ||
| Gene3D | 5 | 288 | 284 | 4.2E-104 | ||
| SUPERFAMILY | 7 | 280 | 274 | 1.8E-70 | ||
| CDD | 7 | 278 | 272 | 1.56514E-122 | ||
| Pfam | 7 | 278 | 272 | 1.8E-110 | – | |
| PRINTS | 28 | 47 | 20 | 6.8E-39 | ||
| PRINTS | 91 | 108 | 18 | 6.8E-39 | ||
| Coils | 151 | 171 | 21 | - | – | |
| PRINTS | 152 | 175 | 24 | 6.8E-39 | ||
| PRINTS | 183 | 202 | 20 | 6.8E-39 | ||
| PRINTS | 224 | 244 | 21 | 6.8E-39 | ||
| PRINTS | 255 | 275 | 21 | 6.8E-39 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. |
Expression pattern of LotjaGi1g1v0072400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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