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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0081000 |
| Transcript ID | LotjaGi1g1v0081000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Coronatine-insensitive protein 1; TAIR: AT2G39940.1 RNI-like superfamily protein; Swiss-Prot: sp|O04197|COI1_ARATH Coronatine-insensitive protein 1; TrEMBL-Plants: tr|A0A0L9UW22|A0A0L9UW22_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0081000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:11708059..11712678) extracted from Lotus japonicus Gifu genome v1.2.
TGAGAGGTGAGTTTTTGTCGTTTTGTTCACTGTCTGGATTCTACTTTCTACCACCATTTCCCTCACATCACACACAACAC AAACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCATCTCTTTGGAAACCCTTCTCTTTCTCTTTCTCTTTCTCTTTC TCTTTGCTTCTATACTATACTTAACACCTAGTTCTAATCACTAGTACCAAAATTCCAACCCCTATTTTTGGGTTCTCATA TATTTCCTCCCTCCGATCCAATCCACAAAACTCCCCCATTCTCCACCGTCCGATTCCTCATCTCTCCCAATCTCCACCGT CCCTCCTCCGATTGGCCACCTCCACGGTTCGGTTCCGATCCACCTGGCTCGTTTTCCACCGAACCACAGCCTTTGACGGC TCCTTTTCTTTCTCCCTTCCATAACTACCTCCCTTCCTCACTCACACGTGTCAACCACATCCTGTTCGAGCTAGATCTCT GTAACCGCCACCGGAATCTCCGCAACCTTTTTCTTAGGCTGTTATGGACGACGACAACGACGGAGGAGGCGGCGGCGGCG GCCGGGATAGGCGGAGGATGACGATGTATTCAAACTTGACCGACGTGGTGCTTGACTGCGTGATGCCGTACATCCACGAC TCGAAGGACCGAGATGCCGTGTCGCAGGTTTGCCGGCGGTGGTACGAGCTAGATTCTCTCACGCGCAAGCACGTCACCAT CGCGCTCTGCTACACTACCACGCCGGAGAGGCTTCGCCGGCGGTTTCCTCACCTGGAATCGCTGATGCTGAAGGGGAAGC CGAGGGCGGCGATGTTCAATCTCATACCAGAGGATTGGGGTGGATTTGTCACGCCGTGGGTGAAGGAGATCTCGCAGTAT TTCGATTGCTTGAAGTCGCTTCACTTTCGCCGCATGATTGTCACTGACTCCGATCTTGAGGCTCTTGCTCGTTCACGCGC TCACACCCTTCAAGGGCTTAAGCTTGAAAAGTGCTCTGGTTTCTCCACTGACGGGCTTTACTATATTGGTAGCTTTTGCA GGTAGCTTAGTTTAAACTTTTTTTCTTCATTTTTTTGGATTCTTACGTTTTATGGTTAGGCAAATGGTAATGAATCGAAT CAGAAATATAATTTTTGGATACTTGCAAGTTTGGTTTATTGATATAGAGAACGTTGTGATTTTGGTAAAACTTTTCTATT CTTTGAAGCTGGACCCTTGTTGTTAATTTAGAATAATTCAGAAAATCATGATGATAGCTTCCACCTGGGATTCATGTAGT GGTTTTAGAGTTTGTGCTTTCATTTAATGTTTTGGGATTTTGTAACCTGCTCTAGCTCCACTACCAATAGTCCACTTGTA TTGGGACCACTGTTGTCAAATCGTGATTGCGGACCATCACGGTGAGTCAAAAATTCATTATTTCAGCCGCGGCGAATAGC GCGCTATAGTGACAATAGCAGCGTCGCGATTAGTCAAAAATCCGTTATAGCCGCTATTTGATAACACTAATTTCGACAGT GTTTTTTTTGTTTTTTCAACCTTTCTGGTAGTACTTTTTAATATTCTAATATTTTGTGGGATAATTTTATGTTTCACAAA TTTTCAGTAAGATTTGTAACGCCACTTATTATTATTTTTTTTTTGAAAATCCTCTGTTTTGTTACTGTTATACTGCATTT CAGATTGCTTAGAAGGAAGCACTCTTGTGATCTGTGATGACTAGTCCAAAAAATTAAGTGCATATTTGTGTACACTGTGA AAACTACACTAAGTCAAAATTCACAGTGGACAGAAGCAACTTTCCTTAGCTCTTGCAATTTGTCTACTGTGATTTTAGCT TCACTGCCACCCATGTATTCAAACATGCACTAAATCTATCTAAATTGGCTCATTTCATGCTGCTTGAGTTTCAAATCAAT ATACCTTTTAGTCATTGATCGCTAATAAGTATGTCTAAAGAAGATGGAATTCCTGTAATTGTTGACTAAAACCGATGTTG ATCAAATCCTTGTAATCTGTGAGGAGCATGGTCGCAGAGTCCTTAGAATCATGAAAGATTCATACTTGTGTTCTTTCATT CGTCCGGGATATAAACAATCCTATACTTATATGCTTCAATTAAAAATGTTAGCCTTATAATTTATCTCTTGTCTTTTCCT CTTCTCGCAAAATTTTGGAGACTGGCTTGGGTAGTGTTAGTTGATCCTCTGTATTCATTTCTTAGGACATTATCTTATGT AAGATTTTTATGACATGTGATTCAAACCTACGGTATTTCTCAGGTGTATGAATCTAACATTTGCTTCATGTGCCTGTTTT TTATAAATTAGCGCAAGTCTGAGTTCTGAAGTTGGATTTTTTCATTTTGGCAGGAATTTAAGAGTCTTGTTTATGGAGGA AAGCTCTGTTGTTGAGAATGATGGTGACTGGCTCCATGAGATTGCTTTGAATAATTCAGTTCTCGAGACACTGAATTTTT ACTTGACCGATATTGCCAATGTCAGTGTTAAGGACCTCGAACTTATAGCCAAAAACTGCCCCAACTTAGTCTCTGTGAAA ATCACTGATTGTGAAATCTTGGAATTGGTGAACTTCTTTCGATATGCTACTTCTCTAGAAGAATTCAGTGGAGGTTCCTA CAATGAAGAACCGGAGAAATACTCTGCTGTATCGTTACCAGCAAAATTAAATCGGTTGGGCCTGACATATATTGGAAAAA ATGAAATGCCAATCGTGTTCCCTTACGCAGCCCTATTGAAAAAGCTGGATCTTCTTTATGCAATGCTTGATACCGAGGAT CATTGTACCTTAATCCAAAGGTGCCCCAACTTGGAAGTCCTTGAGGTAAGTTTATATAACTTTTCTCATTAAAATTGGTT ATCCTTAAAAAATCCATGTGATTACTATTTTCTTCATTTGTTTGGTGGTCTTAATGTTCCATTTGTCACATGAATAGAAT GCAATAAGACATTCTGTTCTATTTTGTTCTCTTTTGATTCTATTCTTTTTAATAGAATTAAAATATACCACTTTTATTTC CTTTGTTTTGTTCTGTTCTACTTTTGATATGCACAAAATACAGAACTTATCCACCAAATGCTATCTTAATTTCTTTTGAT TTAGCCTTCCAAATTGATATATACACCTCTCTAAGTGTACTCCACAGGCACAAACATGCTTGCATATATTGATGTGAATC TTTGATTACATAAAAGGAGCCATGAAACTATAAACTGAAAATTAAAATACAATGTATTTGGATAGTAGGTTATTTTGAAT GAGTGATTAGACAAGATTTGAAATGTTATTAATGAACCAATAATCTTTCTTTATGGGCAGTCAAGAAATGTTATTGGAGA CAGAGGATTAGAAGTACTTGCTCGCTGTTGTAAGAGGCTGAAAAGGCTTAGAATTGAACGAGGTGACGATGATCAAGGAA TGGAGGACGAAGAAGGTGTAGTTTCCCAGAGAGGACTAATCGCCTTATCACAGGGGTGCCTAGAACTTGAATACATGGCT GTTTATGTATCCGACATTACAAATGCATCTCTAGAGCAGATTGGTGCTAACTTGAAAAACCTTTGTGATTTTCGCCTAGT CTTACTAGACCGTGAGGAGAAAATAACTGATTTGCCACTTGACGATGGGGTGAGGGCTTTACTCAGAGGTTGTGACAAGC TAAGAAGATTCGCCTTGTATCTCAGACCTGGAGGCTTAACTGATGTAGGCCTTGGTTACATAGGGCAATACAGTCCAAAC GTGAGATGGATGCTTCTTGGTTATGTTGGGGAAACTGATGCAGGTCTTTTAGAGTTCTCAAAAGGTTGCCCCAGCCTTCA GAAACTTGAAATAAGAGGGTGCTCCTTTTTCAGTGAGTATGCACTAGCTATTGCTGCAACTAGACTCAAATCTCTGAGGT ATCTTTGGGTGCAAGGTTATGGAGCTTCTCCATCTGGGCGTGATCTTCTGGCCATGGCTCGCCCCTATTGGAACATTGAG TTGATTCCTTCGAGACGCGTGGTTGTTAATCATGAAGAGCCTATAGTTCAGGAGCATCCAGCACATATTCTTGCATATTA CTCACTTGCTGGACCAAGAACAGATTTTCCAGATACTGTTATACCTTTGGATCCTGCAGCAGCTTATGTTGTTGACACAT AAAGTTGTACTTGTACATACCTTTTTTTTTTTCCTTGAAAATCTTGTTTGTAAGTGATTGCAGTGTTTTAGCAGAGGTTT CTAGTTTTCTCTGAATTCGTAGACATTATAGTCTTGCAATAAAACACTTTGTTTCTCTTTTTGTAATTCAGATATGCTTC TTCTTCAAACTGGTGCTGCTAGTTCTCTTTCCCCTGAAGATGCTCAAATTTGTGAATATAAAGGATTGTTTTTATGTATT ATTTGCCTCTACTTTTTTTGTGTTTTTAATTTGTGATCTTGCTTAGCTTTCTCACATCCTTTTAATTGTGTGAGATGTAC CTTCTTTAGGGTACCAATATGGTCTTTCCCCTCAAATGTCTTGCTTTATTTGAACCATTCGTCACTCTTGATTAAACAGC ATTTTAAAGAAAAGAACTACACAAAAATGAATAGATAAAATTGTTTATATTTTAAAGGGG
CDS sequence (LotjaGi1g1v0081000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGACGACAACGACGGAGGAGGCGGCGGCGGCGGCCGGGATAGGCGGAGGATGACGATGTATTCAAACTTGACCGA CGTGGTGCTTGACTGCGTGATGCCGTACATCCACGACTCGAAGGACCGAGATGCCGTGTCGCAGGTTTGCCGGCGGTGGT ACGAGCTAGATTCTCTCACGCGCAAGCACGTCACCATCGCGCTCTGCTACACTACCACGCCGGAGAGGCTTCGCCGGCGG TTTCCTCACCTGGAATCGCTGATGCTGAAGGGGAAGCCGAGGGCGGCGATGTTCAATCTCATACCAGAGGATTGGGGTGG ATTTGTCACGCCGTGGGTGAAGGAGATCTCGCAGTATTTCGATTGCTTGAAGTCGCTTCACTTTCGCCGCATGATTGTCA CTGACTCCGATCTTGAGGCTCTTGCTCGTTCACGCGCTCACACCCTTCAAGGGCTTAAGCTTGAAAAGTGCTCTGGTTTC TCCACTGACGGGCTTTACTATATTGGTAGCTTTTGCAGGAATTTAAGAGTCTTGTTTATGGAGGAAAGCTCTGTTGTTGA GAATGATGGTGACTGGCTCCATGAGATTGCTTTGAATAATTCAGTTCTCGAGACACTGAATTTTTACTTGACCGATATTG CCAATGTCAGTGTTAAGGACCTCGAACTTATAGCCAAAAACTGCCCCAACTTAGTCTCTGTGAAAATCACTGATTGTGAA ATCTTGGAATTGGTGAACTTCTTTCGATATGCTACTTCTCTAGAAGAATTCAGTGGAGGTTCCTACAATGAAGAACCGGA GAAATACTCTGCTGTATCGTTACCAGCAAAATTAAATCGGTTGGGCCTGACATATATTGGAAAAAATGAAATGCCAATCG TGTTCCCTTACGCAGCCCTATTGAAAAAGCTGGATCTTCTTTATGCAATGCTTGATACCGAGGATCATTGTACCTTAATC CAAAGGTGCCCCAACTTGGAAGTCCTTGAGTCAAGAAATGTTATTGGAGACAGAGGATTAGAAGTACTTGCTCGCTGTTG TAAGAGGCTGAAAAGGCTTAGAATTGAACGAGGTGACGATGATCAAGGAATGGAGGACGAAGAAGGTGTAGTTTCCCAGA GAGGACTAATCGCCTTATCACAGGGGTGCCTAGAACTTGAATACATGGCTGTTTATGTATCCGACATTACAAATGCATCT CTAGAGCAGATTGGTGCTAACTTGAAAAACCTTTGTGATTTTCGCCTAGTCTTACTAGACCGTGAGGAGAAAATAACTGA TTTGCCACTTGACGATGGGGTGAGGGCTTTACTCAGAGGTTGTGACAAGCTAAGAAGATTCGCCTTGTATCTCAGACCTG GAGGCTTAACTGATGTAGGCCTTGGTTACATAGGGCAATACAGTCCAAACGTGAGATGGATGCTTCTTGGTTATGTTGGG GAAACTGATGCAGGTCTTTTAGAGTTCTCAAAAGGTTGCCCCAGCCTTCAGAAACTTGAAATAAGAGGGTGCTCCTTTTT CAGTGAGTATGCACTAGCTATTGCTGCAACTAGACTCAAATCTCTGAGGTATCTTTGGGTGCAAGGTTATGGAGCTTCTC CATCTGGGCGTGATCTTCTGGCCATGGCTCGCCCCTATTGGAACATTGAGTTGATTCCTTCGAGACGCGTGGTTGTTAAT CATGAAGAGCCTATAGTTCAGGAGCATCCAGCACATATTCTTGCATATTACTCACTTGCTGGACCAAGAACAGATTTTCC AGATACTGTTATACCTTTGGATCCTGCAGCAGCTTATGTTGTTGACACATAA
Protein sequence (LotjaGi1g1v0081000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDDDNDGGGGGGGRDRRRMTMYSNLTDVVLDCVMPYIHDSKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPERLRRR FPHLESLMLKGKPRAAMFNLIPEDWGGFVTPWVKEISQYFDCLKSLHFRRMIVTDSDLEALARSRAHTLQGLKLEKCSGF STDGLYYIGSFCRNLRVLFMEESSVVENDGDWLHEIALNNSVLETLNFYLTDIANVSVKDLELIAKNCPNLVSVKITDCE ILELVNFFRYATSLEEFSGGSYNEEPEKYSAVSLPAKLNRLGLTYIGKNEMPIVFPYAALLKKLDLLYAMLDTEDHCTLI QRCPNLEVLESRNVIGDRGLEVLARCCKRLKRLRIERGDDDQGMEDEEGVVSQRGLIALSQGCLELEYMAVYVSDITNAS LEQIGANLKNLCDFRLVLLDREEKITDLPLDDGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVG ETDAGLLEFSKGCPSLQKLEIRGCSFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELIPSRRVVVN HEEPIVQEHPAHILAYYSLAGPRTDFPDTVIPLDPAAAYVVDT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 14 | 61 | 48 | 2.3E-15 | – | |
| PANTHER | 24 | 585 | 562 | 8.9E-241 | – | |
| Pfam | 24 | 63 | 40 | 9.8E-21 | ||
| PANTHER | 24 | 585 | 562 | 8.9E-241 | – | |
| Gene3D | 62 | 597 | 536 | 2.4E-172 | ||
| Pfam | 82 | 128 | 47 | 6.3E-23 | ||
| SMART | 120 | 144 | 25 | 320.0 | ||
| SUPERFAMILY | 122 | 537 | 416 | 6.28E-22 | – | |
| SMART | 146 | 171 | 26 | 120.0 | ||
| SMART | 323 | 346 | 24 | 710.0 | ||
| SMART | 383 | 407 | 25 | 400.0 | ||
| SMART | 441 | 467 | 27 | 78.0 | ||
| SMART | 493 | 518 | 26 | 5.1 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0081000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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