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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0081000 |
| Transcript ID | LotjaGi1g1v0081000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Coronatine-insensitive 1-like protein; TAIR: AT2G39940.1 RNI-like superfamily protein; Swiss-Prot: sp|O04197|COI1_ARATH Coronatine-insensitive protein 1; TrEMBL-Plants: tr|A0A1J7GQB4|A0A1J7GQB4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0081000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:11708624..11712220) extracted from Lotus japonicus Gifu genome v1.2.
GATAGGCGGAGGATGACGATGTATTCAAACTTGACCGACGTGGTGCTTGACTGCGTGATGCCGTACATCCACGACTCGAA GGACCGAGATGCCGTGTCGCAGGTTTGCCGGCGGTGGTACGAGCTAGATTCTCTCACGCGCAAGCACGTCACCATCGCGC TCTGCTACACTACCACGCCGGAGAGGCTTCGCCGGCGGTTTCCTCACCTGGAATCGCTGATGCTGAAGGGGAAGCCGAGG GCGGCGATGTTCAATCTCATACCAGAGGATTGGGGTGGATTTGTCACGCCGTGGGTGAAGGAGATCTCGCAGTATTTCGA TTGCTTGAAGTCGCTTCACTTTCGCCGCATGATTGTCACTGACTCCGATCTTGAGGCTCTTGCTCGTTCACGCGCTCACA CCCTTCAAGGGCTTAAGCTTGAAAAGTGCTCTGGTTTCTCCACTGACGGGCTTTACTATATTGGTAGCTTTTGCAGGTAG CTTAGTTTAAACTTTTTTTCTTCATTTTTTTGGATTCTTACGTTTTATGGTTAGGCAAATGGTAATGAATCGAATCAGAA ATATAATTTTTGGATACTTGCAAGTTTGGTTTATTGATATAGAGAACGTTGTGATTTTGGTAAAACTTTTCTATTCTTTG AAGCTGGACCCTTGTTGTTAATTTAGAATAATTCAGAAAATCATGATGATAGCTTCCACCTGGGATTCATGTAGTGGTTT TAGAGTTTGTGCTTTCATTTAATGTTTTGGGATTTTGTAACCTGCTCTAGCTCCACTACCAATAGTCCACTTGTATTGGG ACCACTGTTGTCAAATCGTGATTGCGGACCATCACGGTGAGTCAAAAATTCATTATTTCAGCCGCGGCGAATAGCGCGCT ATAGTGACAATAGCAGCGTCGCGATTAGTCAAAAATCCGTTATAGCCGCTATTTGATAACACTAATTTCGACAGTGTTTT TTTTGTTTTTTCAACCTTTCTGGTAGTACTTTTTAATATTCTAATATTTTGTGGGATAATTTTATGTTTCACAAATTTTC AGTAAGATTTGTAACGCCACTTATTATTATTTTTTTTTTGAAAATCCTCTGTTTTGTTACTGTTATACTGCATTTCAGAT TGCTTAGAAGGAAGCACTCTTGTGATCTGTGATGACTAGTCCAAAAAATTAAGTGCATATTTGTGTACACTGTGAAAACT ACACTAAGTCAAAATTCACAGTGGACAGAAGCAACTTTCCTTAGCTCTTGCAATTTGTCTACTGTGATTTTAGCTTCACT GCCACCCATGTATTCAAACATGCACTAAATCTATCTAAATTGGCTCATTTCATGCTGCTTGAGTTTCAAATCAATATACC TTTTAGTCATTGATCGCTAATAAGTATGTCTAAAGAAGATGGAATTCCTGTAATTGTTGACTAAAACCGATGTTGATCAA ATCCTTGTAATCTGTGAGGAGCATGGTCGCAGAGTCCTTAGAATCATGAAAGATTCATACTTGTGTTCTTTCATTCGTCC GGGATATAAACAATCCTATACTTATATGCTTCAATTAAAAATGTTAGCCTTATAATTTATCTCTTGTCTTTTCCTCTTCT CGCAAAATTTTGGAGACTGGCTTGGGTAGTGTTAGTTGATCCTCTGTATTCATTTCTTAGGACATTATCTTATGTAAGAT TTTTATGACATGTGATTCAAACCTACGGTATTTCTCAGGTGTATGAATCTAACATTTGCTTCATGTGCCTGTTTTTTATA AATTAGCGCAAGTCTGAGTTCTGAAGTTGGATTTTTTCATTTTGGCAGGAATTTAAGAGTCTTGTTTATGGAGGAAAGCT CTGTTGTTGAGAATGATGGTGACTGGCTCCATGAGATTGCTTTGAATAATTCAGTTCTCGAGACACTGAATTTTTACTTG ACCGATATTGCCAATGTCAGTGTTAAGGACCTCGAACTTATAGCCAAAAACTGCCCCAACTTAGTCTCTGTGAAAATCAC TGATTGTGAAATCTTGGAATTGGTGAACTTCTTTCGATATGCTACTTCTCTAGAAGAATTCAGTGGAGGTTCCTACAATG AAGAACCGGAGAAATACTCTGCTGTATCGTTACCAGCAAAATTAAATCGGTTGGGCCTGACATATATTGGAAAAAATGAA ATGCCAATCGTGTTCCCTTACGCAGCCCTATTGAAAAAGCTGGATCTTCTTTATGCAATGCTTGATACCGAGGATCATTG TACCTTAATCCAAAGGTGCCCCAACTTGGAAGTCCTTGAGGTAAGTTTATATAACTTTTCTCATTAAAATTGGTTATCCT TAAAAAATCCATGTGATTACTATTTTCTTCATTTGTTTGGTGGTCTTAATGTTCCATTTGTCACATGAATAGAATGCAAT AAGACATTCTGTTCTATTTTGTTCTCTTTTGATTCTATTCTTTTTAATAGAATTAAAATATACCACTTTTATTTCCTTTG TTTTGTTCTGTTCTACTTTTGATATGCACAAAATACAGAACTTATCCACCAAATGCTATCTTAATTTCTTTTGATTTAGC CTTCCAAATTGATATATACACCTCTCTAAGTGTACTCCACAGGCACAAACATGCTTGCATATATTGATGTGAATCTTTGA TTACATAAAAGGAGCCATGAAACTATAAACTGAAAATTAAAATACAATGTATTTGGATAGTAGGTTATTTTGAATGAGTG ATTAGACAAGATTTGAAATGTTATTAATGAACCAATAATCTTTCTTTATGGGCAGTCAAGAAATGTTATTGGAGACAGAG GATTAGAAGTACTTGCTCGCTGTTGTAAGAGGCTGAAAAGGCTTAGAATTGAACGAGGTGACGATGATCAAGGAATGGAG GACGAAGAAGGTGTAGTTTCCCAGAGAGGACTAATCGCCTTATCACAGGGGTGCCTAGAACTTGAATACATGGCTGTTTA TGTATCCGACATTACAAATGCATCTCTAGAGCAGATTGGTGCTAACTTGAAAAACCTTTGTGATTTTCGCCTAGTCTTAC TAGACCGTGAGGAGAAAATAACTGATTTGCCACTTGACGATGGGGTGAGGGCTTTACTCAGAGGTTGTGACAAGCTAAGA AGATTCGCCTTGTATCTCAGACCTGGAGGCTTAACTGATGTAGGCCTTGGTTACATAGGGCAATACAGTCCAAACGTGAG ATGGATGCTTCTTGGTTATGTTGGGGAAACTGATGCAGGTCTTTTAGAGTTCTCAAAAGGTTGCCCCAGCCTTCAGAAAC TTGAAATAAGAGGGTGCTCCTTTTTCAGTGAGTATGCACTAGCTATTGCTGCAACTAGACTCAAATCTCTGAGGTATCTT TGGGTGCAAGGTTATGGAGCTTCTCCATCTGGGCGTGATCTTCTGGCCATGGCTCGCCCCTATTGGAACATTGAGTTGAT TCCTTCGAGACGCGTGGTTGTTAATCATGAAGAGCCTATAGTTCAGGAGCATCCAGCACATATTCTTGCATATTACTCAC TTGCTGGACCAAGAACAGATTTTCCAGATACTGTTATACCTTTGGATCCTGCAGCAGCTTATGTTGTTGACACATAA
CDS sequence (LotjaGi1g1v0081000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGATGTATTCAAACTTGACCGACGTGGTGCTTGACTGCGTGATGCCGTACATCCACGACTCGAAGGACCGAGATGC CGTGTCGCAGGTTTGCCGGCGGTGGTACGAGCTAGATTCTCTCACGCGCAAGCACGTCACCATCGCGCTCTGCTACACTA CCACGCCGGAGAGGCTTCGCCGGCGGTTTCCTCACCTGGAATCGCTGATGCTGAAGGGGAAGCCGAGGGCGGCGATGTTC AATCTCATACCAGAGGATTGGGGTGGATTTGTCACGCCGTGGGTGAAGGAGATCTCGCAGTATTTCGATTGCTTGAAGTC GCTTCACTTTCGCCGCATGATTGTCACTGACTCCGATCTTGAGGCTCTTGCTCGTTCACGCGCTCACACCCTTCAAGGGC TTAAGCTTGAAAAGTGCTCTGGTTTCTCCACTGACGGGCTTTACTATATTGATTACTGGCTTGGGAATTTAAGAGTCTTG TTTATGGAGGAAAGCTCTGTTGTTGAGAATGATGGTGACTGGCTCCATGAGATTGCTTTGAATAATTCAGTTCTCGAGAC ACTGAATTTTTACTTGACCGATATTGCCAATGTCAGTGTTAAGGACCTCGAACTTATAGCCAAAAACTGCCCCAACTTAG TCTCTGTGAAAATCACTGATTGTGAAATCTTGGAATTGGTGAACTTCTTTCGATATGCTACTTCTCTAGAAGAATTCAGT GGAGGTTCCTACAATGAAGAACCGGAGAAATACTCTGCTGTATCGTTACCAGCAAAATTAAATCGGTTGGGCCTGACATA TATTGGAAAAAATGAAATGCCAATCGTGTTCCCTTACGCAGCCCTATTGAAAAAGCTGGATCTTCTTTATGCAATGCTTG ATACCGAGGATCATTGTACCTTAATCCAAAGGTGCCCCAACTTGGAAGTCCTTGAGTCAAGAAATGTTATTGGAGACAGA GGATTAGAAGTACTTGCTCGCTGTTGTAAGAGGCTGAAAAGGCTTAGAATTGAACGAGGTGACGATGATCAAGGAATGGA GGACGAAGAAGGTGTAGTTTCCCAGAGAGGACTAATCGCCTTATCACAGGGGTGCCTAGAACTTGAATACATGGCTGTTT ATGTATCCGACATTACAAATGCATCTCTAGAGCAGATTGGTGCTAACTTGAAAAACCTTTGTGATTTTCGCCTAGTCTTA CTAGACCGTGAGGAGAAAATAACTGATTTGCCACTTGACGATGGGGTGAGGGCTTTACTCAGAGGTTGTGACAAGCTAAG AAGATTCGCCTTGTATCTCAGACCTGGAGGCTTAACTGATGTAGGCCTTGGTTACATAGGGCAATACAGTCCAAACGTGA GATGGATGCTTCTTGGTTATGTTGGGGAAACTGATGCAGGTCTTTTAGAGTTCTCAAAAGGTTGCCCCAGCCTTCAGAAA CTTGAAATAAGAGGGTGCTCCTTTTTCAGTGAGTATGCACTAGCTATTGCTGCAACTAGACTCAAATCTCTGAGGTATCT TTGGGTGCAAGGTTATGGAGCTTCTCCATCTGGGCGTGATCTTCTGGCCATGGCTCGCCCCTATTGGAACATTGAGTTGA TTCCTTCGAGACGCGTGGTTGTTAATCATGAAGAGCCTATAGTTCAGGAGCATCCAGCACATATTCTTGCATATTACTCA CTTGCTGGACCAAGAACAGATTTTCCAGATACTGTTATACCTTTGGATCCTGCAGCAGCTTATGTTGTTGACACATAA
Protein sequence (LotjaGi1g1v0081000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTMYSNLTDVVLDCVMPYIHDSKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTTPERLRRRFPHLESLMLKGKPRAAMF NLIPEDWGGFVTPWVKEISQYFDCLKSLHFRRMIVTDSDLEALARSRAHTLQGLKLEKCSGFSTDGLYYIDYWLGNLRVL FMEESSVVENDGDWLHEIALNNSVLETLNFYLTDIANVSVKDLELIAKNCPNLVSVKITDCEILELVNFFRYATSLEEFS GGSYNEEPEKYSAVSLPAKLNRLGLTYIGKNEMPIVFPYAALLKKLDLLYAMLDTEDHCTLIQRCPNLEVLESRNVIGDR GLEVLARCCKRLKRLRIERGDDDQGMEDEEGVVSQRGLIALSQGCLELEYMAVYVSDITNASLEQIGANLKNLCDFRLVL LDREEKITDLPLDDGVRALLRGCDKLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDAGLLEFSKGCPSLQK LEIRGCSFFSEYALAIAATRLKSLRYLWVQGYGASPSGRDLLAMARPYWNIELIPSRRVVVNHEEPIVQEHPAHILAYYS LAGPRTDFPDTVIPLDPAAAYVVDT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 4 | 43 | 40 | 1.5E-15 | – | |
| Pfam | 6 | 45 | 40 | 9.5E-21 | ||
| PANTHER | 8 | 577 | 570 | 1.1E-239 | – | |
| PANTHER | 8 | 577 | 570 | 1.1E-239 | – | |
| Gene3D | 44 | 579 | 536 | 7.3E-168 | ||
| Pfam | 64 | 110 | 47 | 6.1E-23 | ||
| SMART | 102 | 126 | 25 | 320.0 | ||
| SUPERFAMILY | 104 | 519 | 416 | 2.2E-21 | – | |
| SMART | 305 | 328 | 24 | 710.0 | ||
| SMART | 365 | 389 | 25 | 400.0 | ||
| SMART | 423 | 449 | 27 | 78.0 | ||
| SMART | 475 | 500 | 26 | 5.1 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0081000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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