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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0082500 |
| Transcript ID | LotjaGi1g1v0082500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT2G37980.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|G7KBV3|G7KBV3_MEDTR GDP-fucose protein O-fucosyltransferase; Found in the gene: LotjaGi1g1v0082500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:11837334..11843321) extracted from Lotus japonicus Gifu genome v1.2.
GCAAATTCTAAAAACATGAGAAACAAAGAGAGTGTATCGCCTCATATTCCGCTGCCATACAAAAAGCCTCACCAAACACA AAAGTAGAAACCAAATTAAGTCCCTCTCTCACAACTCCAACCCTGATCAACATGGTTGATTGAATCATTGTTGTGATTTT TTCTAATCACCTCTCACTACTCATGCATTGACCTTAATTGATTTCTCTAATTAATTATAATATTCTCTTCTATACTTTGA TTATTAATTTGCTCTTTTGCCTCTTAAATCCTCCATCACCATGTTCAACAAGGGAAGGAGGGGCTTGTTAGAGGGAGGAG AGGAACGGTACGGGTTGATGTCTTTCGGGTCTTTCGGCACGAAAGACATGTTTCCGGTCCGGCGGAAAATTCGACATTGG CAGAAGCAGTTCTGGCTCAGGCTAGGACGAAGACATTTGTTCTGGGGGTTAATGATTATGGTTTTCATGTGTGTTGTTAC CAAGTTTCTGTTGTTGAACATGTTTTCTGATGAGCTGGATTTGGACCACATGATGCATTCAAATAATGAGGTGGAAGATC TCAAATTACCCTCAGACAACAAGTTCTCGGTATTCAAAAACTTGTTCTCCCTGTATATATCATTACTATAGTTTCTTATA TTTTTCTTCATGAACTTTATTAGTCATCCTGTGTTTTCTTCCTTTCTCTCTCTGTGCTCCTTTCTTTGCCTCTAGACATT TTCTCTTAATTGAAATGCATGTATGTGTTTTTTGGGAATGTAGTTCTAGCTTAGTTGGTTTGAGAAATAGCTAGTGTGTT TCAAAAAAAGAAATAGCTAGTGCTGATCATGGAGTTTTCTCCTCATTCTTTTTCTGGTTAGCTGGACTTTAGTTGCTTCA TTTGTTCATATTTAGTTTTGCACATATTTTTGTTTGTCCATTGGGTAGTATAGTATTGGAAAGTAGTAAAATAATTTTCT GAAATTTTTTATAATTTTAAAATGTGACATAATTATTATAAATTTTCAACACATTTTTAATTAAAATGCGTTTTTTAAAA CAAAAATTACCCACAAGGATGGACTTTTTATTCACACTTATAAAGTTATTATAATAATCTAATGTCACAATTTTTTTAAC AACATATATTTACCTAAAAAGGTCATACTTTGAATCATCTAAAAAGCCTTTAAACTTATTAAGTCTGTCTAATTAGGTCA ATTTAGAATAATAAAAATAAATTTTTAAATTACATACTTATTAATGTATTTACATATTTAATTCATAATGTCGGGATAAC AAATTGATATTAAGCCTATTTAGCATATTTCCTCTTGTAACAAAAAAAAACCTATTTAGCCACAATATATTTAAACAACT TTCCATAAAATAAATTTTGACATATAGTCACAATACTTTCTAAAAGAGGCAAATGCCTTAAAAATGTCTAAAAAATTGTT CAACGGGTTTATAGAACTTTTGTCCTGCCTATCCTGTTTCTACGTAAACCAACTCTTAGGGAGGGGAAGGATGTTCTTGC AAAGAATTTTACCAATTCTCACAAATTTTTCTTGAACTTTAGACAACTCTTTTTCTACTAATCTTGTGCTAACTTATAGT ACAAGTCAACTGTATATAATAATAAGGTTCTGTTTGGGCAGAGGATGGAAGTGGAAGAAAAGTTTTAAATCAAACTTTCA TCTGAAAAAAATGATTACTAAACCTTCTATTATCTTTTGTGATTTTTTCCCCTTCTTTTGTCCATTGATTTTTTCCCTTT TCTATTGTCAACATCCAAAAATATCAAAATTGTCTTTTCACCTTTTGTTGCCTTCCAAAAAATTGCTGAAATTTTACAGT TATCAACGATCTTGTTAGGTATGAATATCATACTAATTTTGTTCAGGACTAAGATATGGTGTTAAAAACTTAGAAGTTAC TATTTCTACCAAAAAAATTGGAGGTGGTTTAGTCCTTTGTTGTGTCCATTTCATATTTCATTTTTCACAGCATGATCAAC ATTAATATGATTTGCTTTTATATTTAGATTGTGATGCTAGTTTTCTTCTGATGTCTGTTAGTTAGACTCTCGAAATTTGG AAGCAACCCAACAGTGACAACTATCACAAATGCATGAATCGAGCTGGGAGTGCTACACGTGCGTCCCAACCTCTTCATTT CTCAAAATTTAAGTGAATGGTGAAATTGGTTGTTGAAAGTGTTGCGGGGCAGAGAAGTACTCCGTAGAAGAAGAAAATAC TCCATGATTCCTGATCATGTAAAATGTCAGTCAATTAGTCTATGTAAATATCACTGGAATTATAACTTGACCGACATTTT ACACAACCAGAAACTCGGGGTATTTCCTAAGACTAAGGATGAATTTGACGGCAGCTCACAACCTTTTCTTAGACAAATTT GACCATTCACTCTCAAAATTTGTGTAATAATCAGTAAAAGTGATTCTCTCTATATTGTGCAGGGAAAGGAAATGCCACAA ATGGCTACATTTTGGTTCATGCCAATGGAGGATTAAATCAGATGAAAACTGGAGTATGCAATATAAATTGATTTTTTATG TAGTCTTTTATTTGTATTTCAAAGCTCTTGTTTCCCTCAATCTTGTGAGGTTAATTATAATTTTCACCATGTTGCAGATA AGTGACATGGTTGCTATTGCAAAAATTATGAATGCCACTTTGGTTTTACCTAAATTAGATCACCATTCATTTTGGACTGA TCCAAGGTAAAAATTCTCATCTTCATGCTTTTCCACAACAAGAAACATGATTCAAATCTTGAGTATGAAAAAAAACCTGA ACATGCTTGCATTAAGCACAAAGAGTTCTTTTGCCTGTTACTAAAGCAATATCTCATCCTGATTAGTGTTTTTTTTTGTC TCAGTGATTTCAAACAAATTTTTAACTGGAGGAACTTCATTGAGGTTTTAAATGATGATGTACAAATAGTGGAATCTCTA CCACCTCGATTGGCAGCAATTACCCCACTTATGAAGGCTCCAGTTTCATGGTCCAAGGCAATACTACACATTCTCTACAT AGAAAGTTTTAGCATGTTTGGATCAGCTTTTCTTTTCCCTAGAATCAATTCTGAAATTCAGAAGCTATTCACAGAAGCTT CTCTTTAGAATTGGTTCTGACTTTAGAGTTGTAGAAAAGGATGTTCAAACATGCGCCGACCGAGTAGTGATTTTGGTTTT GAATCTAAATTATGTGATCACTTTGAAACATGTAGGCCAGTTACTACAGAGGGGATATGGTGCATTTATTGAGGAAACAC AAAGTGATCAAGTTTACACACACTGATTCTCGGCTTGTCAATAATGGCCTAGCTGGTTCAATTCAGAAAGTGCGTTGCCG TGCCATGTATGAGGGACTTAGGTTCTCAGTCCCAATTGAAGAGCTTGGAATGAAGCTAGTGAATAGACTTAAAAGTGACA ACACTCCTTATATTGCTCTGCATTTAAGGTAATTCCCCTAACATATGATTTGTCTAGCTAATAAAACTATTGATTTTAAA GTCAAAATCAATTATGTAGAGAAGCTTCTGTGAGTAGCATCTAGATGTTGGAATTGATTCTAAATGAAAAATAAGTTGAT CTAAACATCTTAGCTCGGTTGCTTAGTGGGGATATAAAAACACATTTTAATATAAAATTGCATGTAAGATTGTGATTGGT TAAATGTTGGTCAGCGAGTGTAGTGTGTTTGAAAACTCGAGTGATTTCACTTTAGGAAGAGAATTGATTCTATGAGAAAC TACTCCTACTAACTTTTATGGGAGAGAAGTGATTTTGAGAAATTTAAAGTTGAAACAAACATTCTAGTAGTTAATTATTT TCAGAATAACTATTGCATAGTAATGAAGGAGCAATTCTTTCAAGAACAATTATAGACACAACCAATCAAAAGTTAAGAAT TCAATAAAATAACAATGAAATGGACATCAACATTTTGAATTGCTAATTCATCATCTCTATTGACACTGTTCATGCAAGAA AAATCCAAGACTGGTCATGTATAGTTAGTTATGCATTCTCTCTTTTCATATTCACCTTTGTAACTAATCTTTTGCACTAA ATAGCATTGCTGGAAGGGATATTCTATCTTCACAAATGTAAACCCTCCAAAATAAACTGAAAATTTGTATGAAATTTAAC TTTTCTCCTTACAAGCACATGGCCATATTGCAGATATGAAAAGGATATGCTTGCTTTCACAGGCTGCAGCCACAACCTGA CAAGAGACGAAGCCATGGAGCTCAGAAAGATGAGATACCATGTCAAACACTGGAAGGAGAAAGAGATTGACAGCAAATCG AGGCGCTTAAGGGGAAACTGCCCCATGACACCAAGAGAGGTTGCTGTTTTCCTAGAAGCACTTGGCTACCCTCATGATAC AAAAATCTATGTAGCTGCAGGGGAAATTTATGGCTTAGATGGAATGAAACCACTGCAAACCAAGTATCCTAATGTGCTCT CACACTCCACTTTAGCCACAAAAGAAGAGCTTCAACCCTTTGAGGGTCACCAGAATCAACTTGCTGCTTTGGATTACATG ATTGCAGTGGAAAGTGATGTTTTTGTTTACAGCTATGATGGGAACATGGCCAAAGCAGCCAGGGGTCACAGAACATTTGA AGGGTTCAGAAAAACCATTTGCCCTGACAAGTATTGATTCTCTTAAACAAGCATTATTTTAGCATATGATTACTAGCTAG CACATAGTTAATAGCTGGACATCCAAACAGTATAGACACCCCACAAACTGATTGAAATCATATGTCCCCACTTGGTGTTT CATTCTCTGTCTCACCAATCCAAAATCACACATGTAAGGTTATAATTGTCATGCTCATGCTTATATGACACAATTTGATT GGTGGGACAAGGAATGAAGGACACCAAATGAAGACTGAACATATTTATTCCCTCCTCACACATCTCATTTTTCACTCTAT TTCTCTATTTTTTATCACATTCATCTTATGTCTTAGGGTGAAATCCTCTGTCCCCACTTGGTGTCCAATTCTCTGTCTCA CCAATAAAAAATCACTCATGTAAGACTATAATTGTTATACCCATGTTTACATGACACAATTTAATTGGTTAGATAGAGAA GGAATAACACCAAATGGAAACATAAGATGTTCACTACTTTTTTCTCTTTCTTTTTCACTTTGAGTGTCTGTCAGGTGTCT GCACTGTGCCGATGTCTTCGAATCGTTTTGCTATTGTTCATATTATTAGTCTAATTTGGTTTCTTTCTAATGGAAGTTAG TATGTGTAGGCAAAGGTTTGTGAGGCTGATTGATCAGTTGGACAATGGTTTGATTTCATGGGAAGATTTCTCATCAAAGG TTAAGAGCATCCATGCAAACAAGAATGGAGGTCCTCATCCTAGAAAAGTGAAGCGCCACCCCAAATTGGAAGAGTCCTTC TATGCAAACCCACTTCCAGGTTGCCTTTGTGACAAGACACACGAGGGTTCAGAATCAAGTCATGAGTAGAGTCATGACTT ATAGCATGTTTGGATCAACTTCCCTTAATTCTGAAAGGCAGAAGCTTCTCCCAATAATTGATTCTGAATTAAGAATCATT TCTAGAAGGGTTTTCTAACATGCACAAGCTAATGGTGCTGAACCATTTTATGAAACAGAACTGTTTCGGATGTGTGTAAA TATGCAGGGTGATTTCAGCTGCAGAAGCCAGTTGCTCAATTGTTTCAAATTGTATATTAGAATAGATAGAACAGGTTAAT TGGTAGTTTCTGACATTAGCTAGTATCATAGTCATGTTCTGAAAGTGTAATTAATTTTTTTAATGTAAATTTAATGTTAC ATTAACAAAGCTTTAGAAATTACTAGTAGTTTAGTTGTATAGCATCAGTTTTTTTTTTTGTCAAAGTATAGCATCAGCTG AAATTTATATATTTGTCTGCTGATTCAGCTGATTTGTTTGATGATGGTTCAGATGAAATATATGCAGC
CDS sequence (LotjaGi1g1v0082500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCAACAAGGGAAGGAGGGGCTTGTTAGAGGGAGGAGAGGAACGGTACGGGTTGATGTCTTTCGGGTCTTTCGGCAC GAAAGACATGTTTCCGGTCCGGCGGAAAATTCGACATTGGCAGAAGCAGTTCTGGCTCAGGCTAGGACGAAGACATTTGT TCTGGGGGTTAATGATTATGGTTTTCATGTGTGTTGTTACCAAGTTTCTGTTGTTGAACATGTTTTCTGATGAGCTGGAT TTGGACCACATGATGCATTCAAATAATGAGGTGGAAGATCTCAAATTACCCTCAGACAACAAGTTCTCGACTCTCGAAAT TTGGAAGCAACCCAACAGTGACAACTATCACAAATGCATGAATCGAGCTGGGAGTGCTACACGGAAAGGAAATGCCACAA ATGGCTACATTTTGGTTCATGCCAATGGAGGATTAAATCAGATGAAAACTGGAATAAGTGACATGGTTGCTATTGCAAAA ATTATGAATGCCACTTTGGTTTTACCTAAATTAGATCACCATTCATTTTGGACTGATCCAAGTGATTTCAAACAAATTTT TAACTGGAGGAACTTCATTGAGGTTTTAAATGATGATGTACAAATAGTGGAATCTCTACCACCTCGATTGGCAGCAATTA CCCCACTTATGAAGGCTCCAGTTTCATGGTCCAAGGCCAGTTACTACAGAGGGGATATGGTGCATTTATTGAGGAAACAC AAAGTGATCAAGTTTACACACACTGATTCTCGGCTTGTCAATAATGGCCTAGCTGGTTCAATTCAGAAAGTGCGTTGCCG TGCCATGTATGAGGGACTTAGGTTCTCAGTCCCAATTGAAGAGCTTGGAATGAAGCTAGTGAATAGACTTAAAAGTGACA ACACTCCTTATATTGCTCTGCATTTAAGATATGAAAAGGATATGCTTGCTTTCACAGGCTGCAGCCACAACCTGACAAGA GACGAAGCCATGGAGCTCAGAAAGATGAGATACCATGTCAAACACTGGAAGGAGAAAGAGATTGACAGCAAATCGAGGCG CTTAAGGGGAAACTGCCCCATGACACCAAGAGAGGTTGCTGTTTTCCTAGAAGCACTTGGCTACCCTCATGATACAAAAA TCTATGTAGCTGCAGGGGAAATTTATGGCTTAGATGGAATGAAACCACTGCAAACCAAGTATCCTAATGTGCTCTCACAC TCCACTTTAGCCACAAAAGAAGAGCTTCAACCCTTTGAGGGTCACCAGAATCAACTTGCTGCTTTGGATTACATGATTGC AGTGGAAAGTGATGTTTTTGTTTACAGCTATGATGGGAACATGGCCAAAGCAGCCAGGGGTCACAGAACATTTGAAGGGT TCAGAAAAACCATTTGCCCTGACAAGCAAAGGTTTGTGAGGCTGATTGATCAGTTGGACAATGGTTTGATTTCATGGGAA GATTTCTCATCAAAGGTTAAGAGCATCCATGCAAACAAGAATGGAGGTCCTCATCCTAGAAAAGTGAAGCGCCACCCCAA ATTGGAAGAGTCCTTCTATGCAAACCCACTTCCAGGTTGCCTTTGTGACAAGACACACGAGGGTTCAGAATCAAGTCATG AGTAG
Protein sequence (LotjaGi1g1v0082500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFNKGRRGLLEGGEERYGLMSFGSFGTKDMFPVRRKIRHWQKQFWLRLGRRHLFWGLMIMVFMCVVTKFLLLNMFSDELD LDHMMHSNNEVEDLKLPSDNKFSTLEIWKQPNSDNYHKCMNRAGSATRKGNATNGYILVHANGGLNQMKTGISDMVAIAK IMNATLVLPKLDHHSFWTDPSDFKQIFNWRNFIEVLNDDVQIVESLPPRLAAITPLMKAPVSWSKASYYRGDMVHLLRKH KVIKFTHTDSRLVNNGLAGSIQKVRCRAMYEGLRFSVPIEELGMKLVNRLKSDNTPYIALHLRYEKDMLAFTGCSHNLTR DEAMELRKMRYHVKHWKEKEIDSKSRRLRGNCPMTPREVAVFLEALGYPHDTKIYVAAGEIYGLDGMKPLQTKYPNVLSH STLATKEELQPFEGHQNQLAALDYMIAVESDVFVYSYDGNMAKAARGHRTFEGFRKTICPDKQRFVRLIDQLDNGLISWE DFSSKVKSIHANKNGGPHPRKVKRHPKLEESFYANPLPGCLCDKTHEGSESSHE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 52 | 52 | - | – | |
| PIRSF | 24 | 525 | 502 | 5.1E-154 | ||
| PANTHER | 43 | 528 | 486 | 9.2E-270 | – | |
| PANTHER | 43 | 528 | 486 | 9.2E-270 | – | |
| TMHMM | 53 | 75 | 23 | - | – | |
| Phobius | 53 | 75 | 23 | - | – | |
| Phobius | 76 | 534 | 459 | - | – | |
| Pfam | 136 | 451 | 316 | 3.9E-70 | ||
| CDD | 136 | 457 | 322 | 5.48553E-146 | ||
| Gene3D | 274 | 459 | 186 | 2.4E-7 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0082500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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