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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0087200 |
| Transcript ID | LotjaGi1g1v0087200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein phosphatase 2C-like protein; TAIR: AT1G07430.1 highly ABA-induced PP2C protein 2; Swiss-Prot: sp|Q9LNW3|P2C03_ARATH Protein phosphatase 2C 3; TrEMBL-Plants: tr|A0A0R4J5P1|A0A0R4J5P1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0087200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:12608971..12611618) extracted from Lotus japonicus Gifu genome v1.2.
AATCGATTTTCTTTCGTTTCATTTCTCTCATCAAAAAACTTGCTTCAATTCTTCATATATATTAACAGTTTTCAATTATT CTTCTTCTTCAGAGGTTTCTAATTAATTGAGTTTGAAGAGATCTGAGATTTTTTTAATGGCTGAGATTTGTTGTGGTGTT GTTGGAGAAGGTGACACGCCTACTCCAATGGAACCAAGCTCAAGGCCTTCAGCTCGCCGGAGCTTGGACATGCTTCCCTT GAAATTCATGGCAAACATGCCAATTCCGCCACCGGAGGCCAGCCGGAAGAGGCAGAAGCTGGATCTGTGTGTTTCTCCGC CGCCGGAGCGGGAGGTTGAGAACGCTGTTGAAACCTGCCAAGACAGAGTTGGTGGGCCCCAGGAGGAGGAATCAGAGGGT TCTGTGATTCCGGTGAGGTTGGAAGATGAGGTGGTGGTTGTTGACGAGAGTCCCAAGTATGGAGTCACCTCGGTTTGTGG GAGGAGGAGGGACATGGAAGACGCAGTTTCAGTGCGTCCTTCGTTCTCAGAAGAGAAAGGGGTTCACTTCTTCGGTGTCT ACGATGGCCATGGATGCTCACATGTAAACAACGCTCAACCCGACCCGTTTTCTTCTTCTTCTTCTTCTTCTTCTTCATTG GATCCGATTCTTAATTGCTTTGTTTTGTTTCTTCAGGTGGCGACGATGTGCAAGGAGAGGATGCACGAGATTGTGAAGGA AGAGATTGCAGAAAAACCCGAATCCAAATTGGATTGGAAATCCACCATGGAGCAGAGTTTCACTCGCATGGACGAAGAGG TTCTCACCTGGACCCACAGCAACAACCAGAAATCCACTTGCCGCTGCGAGCTCCAGACTCCTCACTGCGACGCCGTCGGC TCCACCGCAGTCGTCGCCGTCGTCACGCCGGAAAAGATCATAGTCTCTAACTGCGGCGACTCACGCGCCGTCCTTTGCCG TAACGGCGTCGCCATCCCCCTTTCCTCCGATCACAAGGTTAGTTTAAATTGTACCCGTTTTCAGAATTTGACCCGTTGGA TCGGGTCGAGGATCCGAATTTGGCGCGTTTTTCACACGCGCGAATTATTTGTAGTTGTGTGATGTGTACTAACTAGTTTG GTTCGGGTTACCCGTTTTGTGCAGCCGGATCGACCCGACGAGTTGAACCGGATCGAATCCGCGGGTGGGCGCGTGATCTA TTGGGATGGTCCTAGAGTGCTTGGGGTGTTGGCCATGTCAAGAGCCATAGGTGAGTGAGTGCGCACGATAAGCCACTTTT TTCTGTTTTATTTATTAATTGTCACACCCGGCGCATTATTGTAATGTTCGGTTCTGAATTATTAAGGTTTTTTTTTCAGG GGACAATTATTTGAAGCCGTACGTTATTTCGGAACCCGAGGTGACGGTGATGGAGCGGAGTGACGAGGATGAGTGTTTGA TTTTGGCGAGTGATGGGTTGTGGGACACGGTGCAAAATGAGACTGCGTGCAGGGTGGTGCAGATGTGTCTGAAGGCGGAG AAGCTGCCGTCGCCGCCGGGGTCTCCGGGGAGAGATGTGGCGGCTGATGGATCGGACAAGGCGTGCTTTGATGCGTCCAT TTTGCTGACGAAGTTGGCGATGGCGAGGCATAGTTCGGACAATGTGAGCGTGGTGGTTGTTGATTTGAGGAGGGAAAAAC GTCCACAACAACAACAATGATTAAGGATTATTAATTAATGTAATGGGAGCATTAAAAAATTACTAATTCATTAATCAATT GCCCTAAACCTAAGTAATTGGGGACACCTACGTTTTGAAGGATTTTATCATTGGGAAAAAGATTGGGGAAAGTGGAGGAT GATAGGCTATTGATGATTCATTCCATGTGATTGTAGTAGAGGTAGTGGAAATTGTAACAGTTGGGAATGGTCAACAAATC ATAGGAAATTTTTAGAGTAGTGAGGACATTTGATCTCAACCAAATGCTTGAGGCAATTTTCGTTGCCCATATATTCTGTA ATTGGATTTTGATGTGAATTGCCTGAAGTTGTAAAATTATCTGCAAAGGGTGCATATTCACATTCATTACGTCTCCATAT GTCTTTTTTTATTATATTACATTCTTTACTTTTGAATAAAATTAAATTTCATTCACATTTTTTGATATGGTAAAGAGTGG AAAAGAGGTGGAGAGAAGAGATATACGAATAAAAGAGAGTAAAAAAAAGAAATGTGATGAGTTATATGATTAAAAGAATT AGAGATAGATAGAAATTTAAATTGGAAATAAAGGGAGAGTGAATATATTATAGCTCCACCTAGTGAAATGATTTGGATGA GAGAGGGAGGAGGGCAGAGAGGAGAGGTTTAGGGCAGATTAGGGGGAGAGGAGCTTTGTTTGTTTCAAAAGAATCTGAGA GGAAAAGAAAGTGAAGGAAAGAAAAGAGCAAGAATATTCTGTTTTCCACTGTTTGGTATCACTGCAAGAAGAAAAGAAAG GAAAACTTTTTGTGGGTCCCATAGCAAAAAACTTTCCTTCCGATTTGGGCAGAAAAGTGGAAAGTTGGAGCAATTTTCAT AAAAAATACCAAACTACCCTCAAGTTGGAGCCATTTTATGGGTTCTACTTCTACAGCTTGATACATGTGGCCATTGCATG TACAAAAT
CDS sequence (LotjaGi1g1v0087200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAGATTTGTTGTGGTGTTGTTGGAGAAGGTGACACGCCTACTCCAATGGAACCAAGCTCAAGGCCTTCAGCTCG CCGGAGCTTGGACATGCTTCCCTTGAAATTCATGGCAAACATGCCAATTCCGCCACCGGAGGCCAGCCGGAAGAGGCAGA AGCTGGATCTGTGTGTTTCTCCGCCGCCGGAGCGGGAGGTTGAGAACGCTGTTGAAACCTGCCAAGACAGAGTTGGTGGG CCCCAGGAGGAGGAATCAGAGGGTTCTGTGATTCCGGTGAGGTTGGAAGATGAGGTGGTGGTTGTTGACGAGAGTCCCAA GTATGGAGTCACCTCGGTTTGTGGGAGGAGGAGGGACATGGAAGACGCAGTTTCAGTGCGTCCTTCGTTCTCAGAAGAGA AAGGGGTTCACTTCTTCGGTGTCTACGATGGCCATGGATGCTCACATGTGGCGACGATGTGCAAGGAGAGGATGCACGAG ATTGTGAAGGAAGAGATTGCAGAAAAACCCGAATCCAAATTGGATTGGAAATCCACCATGGAGCAGAGTTTCACTCGCAT GGACGAAGAGGTTCTCACCTGGACCCACAGCAACAACCAGAAATCCACTTGCCGCTGCGAGCTCCAGACTCCTCACTGCG ACGCCGTCGGCTCCACCGCAGTCGTCGCCGTCGTCACGCCGGAAAAGATCATAGTCTCTAACTGCGGCGACTCACGCGCC GTCCTTTGCCGTAACGGCGTCGCCATCCCCCTTTCCTCCGATCACAAGCCGGATCGACCCGACGAGTTGAACCGGATCGA ATCCGCGGGTGGGCGCGTGATCTATTGGGATGGTCCTAGAGTGCTTGGGGTGTTGGCCATGTCAAGAGCCATAGGGGACA ATTATTTGAAGCCGTACGTTATTTCGGAACCCGAGGTGACGGTGATGGAGCGGAGTGACGAGGATGAGTGTTTGATTTTG GCGAGTGATGGGTTGTGGGACACGGTGCAAAATGAGACTGCGTGCAGGGTGGTGCAGATGTGTCTGAAGGCGGAGAAGCT GCCGTCGCCGCCGGGGTCTCCGGGGAGAGATGTGGCGGCTGATGGATCGGACAAGGCGTGCTTTGATGCGTCCATTTTGC TGACGAAGTTGGCGATGGCGAGGCATAGTTCGGACAATGTGAGCGTGGTGGTTGTTGATTTGAGGAGGGAAAAACGTCCA CAACAACAACAATGA
Protein sequence (LotjaGi1g1v0087200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEICCGVVGEGDTPTPMEPSSRPSARRSLDMLPLKFMANMPIPPPEASRKRQKLDLCVSPPPEREVENAVETCQDRVGG PQEEESEGSVIPVRLEDEVVVVDESPKYGVTSVCGRRRDMEDAVSVRPSFSEEKGVHFFGVYDGHGCSHVATMCKERMHE IVKEEIAEKPESKLDWKSTMEQSFTRMDEEVLTWTHSNNQKSTCRCELQTPHCDAVGSTAVVAVVTPEKIIVSNCGDSRA VLCRNGVAIPLSSDHKPDRPDELNRIESAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVMERSDEDECLIL ASDGLWDTVQNETACRVVQMCLKAEKLPSPPGSPGRDVAADGSDKACFDASILLTKLAMARHSSDNVSVVVVDLRREKRP QQQQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 34 | 400 | 367 | 1.7E-156 | – | |
| PANTHER | 34 | 400 | 367 | 1.7E-156 | ||
| SMART | 93 | 392 | 300 | 1.8E-95 | ||
| Gene3D | 102 | 403 | 302 | 5.7E-105 | ||
| SUPERFAMILY | 105 | 395 | 291 | 3.01E-76 | ||
| CDD | 107 | 347 | 241 | 3.32904E-88 | ||
| Pfam | 107 | 354 | 248 | 3.4E-66 | ||
| ProSiteProfiles | 107 | 394 | 288 | 54.289 | ||
| ProSitePatterns | 138 | 146 | 9 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. | ||
| Molecular function | Cation binding | Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge. |
Expression pattern of LotjaGi1g1v0087200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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