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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0092800 |
| Transcript ID | LotjaGi1g1v0092800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT5G37800.1 RHD SIX-LIKE 1; Swiss-Prot: sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086; TrEMBL-Plants: tr|I1M867|I1M867_SOYBN BHLH transcription factor; Found in the gene: LotjaGi1g1v0092800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:13632517..13640652) extracted from Lotus japonicus Gifu genome v1.2.
CTCGTTACAGTGGTAGCAGTTACCGCTTCGTTGCGGAATTGCAGATAAATACGGGTTGATGCAGCAACAATTGCTGTCGC GATGCCGATGCAGGGGACTCTAAAACCTGTTGCGAACTTGCGGCAACCACAATTTGAAGCCCTGATCTCAACAATATATA AAGGAAAATGTTTGGTAGACGTCTAATGTGTATAAATAAGCAGAAAGAAAGAGAAAAAAAATATGTAATGGATATGATAT ATGATGCAATGTGGCAGGAAAAGAGAGATGAAAAACAAAAGTAGGTGTGTATGAGGTGTCTGTACTATTTGCAAGTTTAA GAACAAGAGTTTGAAATATAAATAGTCACGATTCGCTGCCACCAAACAGTATAGACACCTCATGTACGTTCCTTTTTTTA TCTCTCATTTCTTATCACATCGCTTTACGTTACTTGTCTCTTTGTCTTTCTTTTCTTACTCTTGCTTCTCTATCCAACAT TTTCCAAAAATTAAAATAGCAGTTGGTTTGAAAGCCTGAACATCTATAAAGAGGCACTCTTCACTAGTGCTCATTTTGAC CTGCAAGAAGAAACCTTAGTTGCATTTTTCATTTGGGTTTCCTCTACCTCTCTAATGGCACTAGCCAACAACAAAATCCC ATATGGTTCAACCATGAGTAGCAAGTTTCAAACTTCTGTTTTTGATGAAACTGCTATGGAGATTAACTCTCTGCAAAAAT CTCTGGTTGAAGAGGAAGATGGCTCACAGACCACTAATGGGCTCAGCAATGATTCAGCATCAGCCACAACCCTTTCTTCT CCTCCTCCTCCATGTAGCAATAATGGTTATGCTTACAAGAGCACAAATTATCCACCTGAAGAAGCAGAATCTCTGATTGA TTTCAAAGCCAAAGAGTGCAGCAGCAACATCATGCAGGGTAGTGAATCTTTGCTCAGCTTTCAGCAGAGTTGGTTGGTCT CTAATGAGGACAATTCGCCTGAAGGTTATGACCAATGGAATCATGTTAGTCCAAAAAGCACCACAAGCTTGCACATGATG CAGGGTTTCAGTGGCTATAGCTCAATATTCAACAATGAAAAAGAGAAGCAACATGATGAAAGTTCATATGGATGGCTATA CTCTGAAACTGAAGTCCCTGGTGATCGCCTACTAGAGACAGCAACACGAGAATCTGTCTTGAGGAAACGCTCTTCAATGG TATTTGCTTTGCTTCCTCAGTTACATGCCAAAATATTCTCCCCTTTTTGATGTTTTGGAAAATGGGAGTGTCACCCTGAA TAGAAATTTTTTCCTTAATAGAATAGCATTCAAATGCAGCAGTATTCGCCCACCTTAAAAAAATTAGTCTTCTTTAATTA GTACTAATTGCTAATTTTGCCTAATGTGTTCAATATTTTTCCTTCTTTATAAACTTTTTCTGGTTCCATCCCTGGTCCTT AATTAGAGAAGTTTATCAAATTATGATGAGTGAGATAATTTTTTGTGTATGCAGGGAGAGAGCATGCTAGCTTCCAATGC CAAGAAGCCATGCACAGAAGCAAGTAAAGGTGAAAAGCCTAAGTCAAACCCATCTAAGGATCCTCAAAGTGTTGCTGCTA AGGTTTGCTTCAAACCCAAGTTACATTATGTTTGATTTTTGCTTACAATTTAAGAAAGCATAAAGTATGAGATTCAATGT TGATGGAATGTTTGTATCACAGAACAGAAGAGAGAGAATAAGTGAGCGGCTTAAGATCCTACAAGAACTGGTTCCCAATG GCTCCAAGGTAGATTTTTCAAACTAGTCCTGAAAAGTTGTTTCCCTTGCATTTCTTTTGGCTGTGAAAATGAACATATAT TGCTGACTTAAACTGCTTTATTACAGTTTCGAGCTTTGATAACTTTTAATTAATAGAATCGTGATTCTATTTTGATGATG AATTTTGCAGGTTGATTTGGTTACCATGTTGGAGAAAGCGATTAGTTATGTTAAGTTTCTTCAGTTGCAAGTGAAGGTGG GTCTTGAAAACATTATAGTAATTTTCTTCTTTTGATATTTAGATTTTATGTCCTGTACAAATCTTTATGTATGTTGAAAT CTTCATTTTCTTCGCCATCGAATGTTTGGTTCAAGTAGTACATATTTGATTGCTCTTGAGAAGTGTTACATATTCGAGTT TTGTGGATTAAAAAAACTCCTGCCAGAAGAGCTAGCTCCACCAGAATGTTGAGGTTCCTGCCGGCTCGAAAAGAATTGCT TCCATGGAGGATACCTGTATTGGAAAAAAAAAACTTCAGTTTGCTCAAACTCTGCTGATTCATGGCTATGAATTGAAACC TCACTCAACTCATTCATGATGCAGGTTTTGGCAGCTGATGAATTTTGGCCTGTCCAAGGAGGAAAAGCTCCTGATGTTTC TCAAGTAAGACAAGCCATTGATGCTATTCTTTCATCTCAAAGATGATGATGAATTGAAGATCTTGGATCCAAGAAATAAT TATCATCATTGATGGTTCAAGCTACTTAGAAAACAAGAAAAGAAAAGCCTTATTCAGGAAGTAGGCCATTCTGAAGGGCA GTTTAGAAATTCAGAATGCATGACCCTTTCTAATTTTTTAACTTCTAAATCAAAATTTTGCTGCAAAATGTAACATTTTG TGTTTCTGGCAGTTCATGTGTATTCTGGGGCAAACTTCCCCAGCATTTCATTCACAAAGCAGTACGTGTCTATGTTGTAC TTTTCTTTGTACTAGTGGTGATGATTTCTGATAATTATCTTACTACTCAATAAACTATTATATATAATGCATGAGTTTGA GTGTACTAAAAGCTATAAATCATATGCTGTGTTCTTTGACTTTTCTCTGAACTAACTATCAGCCAGAGTGAAGGAAATGT TTAGCTATTTATTATGGCTAGCTATTTAATTTAAACTTTCTTTTTTTCTCATATACTGCCGCGTTACTCTTGGTGAGTAC AAATTAATTAATATAATTGATATTTCCTACATGTGTAAACCAATTAATATAATTGATATTTTTTATAAGAAGAAGAAATA TGTAATTAGTTTAATAGATTCTATCCAAGCCAAAAGTGAGAATAAAATGTGAATGTCTTTTTATGATGTTGTTTATATTA TAAATATAATAAAGACTTAAATACTCTTTTAGTCCCCGGAATTGTAAAGAGAATCTACCCTGATTCTTGTAAGATTTTCG CATTAAATTAGGTCCCTAAAATATTTTTTTAATCTAATTAAGGACTAAGTGTGCTTCCTGCTTATGTGTCTTTTTTTTTT CAGTTTTCCATGTGGCTTTTATCTTTTTTTTTTAAATACAAGTAATTTTTATTCATTTATTTTTAATTCCATCTCATTAC ATTAAAAATAAAACCTAAATTAATCTAAAACAAAACCTAACCTAATCTTAAAATCTATGGAAGAAGGCCTATGTCTTCAT GAACTATTGAAGAACTCATGGAAGAGGGAATCTGTCTAAAAATCTAGAGAAGGAAGATGTGGGTTCATGGGGTTCTTCGG TGATTCATGTGGTTCTCAATTTCTTGAATCAAACTTTTCCACAACCATGCTTCCGTCGCTCGTGAGTTTCGGCGCACAAA CAGCAGGAACCTTGAATCTCAGTTTGCAAACCTTGCTCTAAAGCACAAGGACACCAATTCAGAGCATCAGTGGCGGAACC AGAAATTTTAGGAAGCCTAGGCAAATTTTTAAACCGCAAATTCACACGCCACAATATATAAATAGTTATAAACCCAAATA AAAAAGACTCGTCATTTTACCAACAAAAGTATAGCTAATTTTGGTTCCATTTCGTTAGACAATACAAGATAAGAAAAAGA CACGTTCAAGAATACAATACAAGACAAGAAAAAATAGAACATACCAATAGTGTGCTAAGTGTTTAGAAAACCATGAGGCA AATGCTCTCTTCGAGTCTTCTTTGCGGCAAATGTTCGAAGAATATCAAGATCACTAACTGACTTGAATATCTCTCGCTCG GTGTAACATATCATCAAGTCATTGAACCACTCATTGTTGATCTTGTTGCGCAATTTAGACTTGATAATCTTCATTGCTGA AAAAGCTCTTTCAACAGATGCTGTCGACACCGGCAATATCAAAGCCAACTCAATAAGTTTGTAGACCAATGGAAATAGCA AATGTTTCTCAGTTTGAACCATCTTCATAGCCAAACTTGCAATATCATCACAAGTAGAAAAGGAAGCATGCCTTTTCACT TGAAGTATAAAAGTGGAAAGTTGCTCCTTTATTGTTCCACGGTCATCATCAGAAAAGTCAGCATGATAAATAGTAGCAAG ACGAGCAAGCTTATCAACATTAAACTTGGAGAAAGAGTTATTGGGGTCAAGACATGAGAAGCAATCAAGCACAATATTAG TTCCTTCACTAAAGCGGTGATCCATCTCCACACATATTTTGTCAATAGCAACATAAAAAATCTCTGCACGGTAATAGTGA AGATTAGTGATAGTCCTCCCTTCTTTCCTTGAACGACCCCGAACCGGTATTTCTTCATTCATATTTGGCACCGGAATACA TTGGTCACCACAAAATTCTTGGACATCACCAAATAAATCATCCCAACCACTATCTCTCAATGTCTTCAACCTAGCTTTGA CAATATGAACTAATTCCATGGCAAGCACAATATTAAGATCTTTTTGTTGCAAGATTTTTGAAAGCTCATTAGTGATACCA AACAACTTTAACATAAGCTTCAAAATGAAAGCAAATTCAAAGCTCTCCATTTTTAATATCAAACCTGCTGCTTGAGATGG TCCACGTGCATCTTCATCAACCATATTAAGCACTGTTAACACAGAAGACCACATTTGATCCAAACGAACCAAGGTAATAT GATGTGTAACTCATGCTAATTCGGCCCTGTGATAATAGTTTTTCACCACTGTCTAATGTAAATCATAGTTAGCTAATTCA AATGCTAAGAAAAAAACAAATATAATGAGATCAAATTAGTTTTAGATCATAGTTGGCAGTTGCCTCATGCTTTTAGTTTT AGAATCAAATTAAAAGCACTAAAAGACAACACAAATAAATACAATAAGATCAAATGATCAATAATGCACACATGTTTTTA ATGGGGAAGAGGACCACCTCTACCCACCTACAGACCCACTCACAATAAAGAGCAATTAAAAGTAGTCACATTCCAATTTT CATAGCTAGTAGCCACATTCCAATTCAAGTCTTGAGTCTCTCACCCATAAAGGCTATCCACATTCCAATAATTCAATCTC CAAAGGCTGATAGCTACATTTTTCCAATTCACTTCTCACTCTTCTCATTCCCAATTTCTCAATCTTATAAACAATTTTCC TTTTCTACTCTATCCATTCCCAACCCTTTTACTCTATGTCTCTATCCATTCCCAATTTCTCTCCACCTTCTACAGTTCTA CTCTAGTCTCTATGTTTCTATCCATTCCAATTTCTCTCCATCTTCTACTCTATCCATTCGACTATTCCCAATTTCTGCCC CTGTTCTCAATTTAATCTCCAACTCACTCTATGTCTCTATGTCTCTACTATATCAATTCCAATTTCTCTCCACCTTCTAC TACTCTATGTCTCTATCCAATTTCTGCCCTTGTTCTCAATTTAATTTCCACCGCTTCACTCCCTCTGTCCCTCACCTCAC CCACCGTCCCACCGCTTCACCCACTCATGACTCACCCACGGTTCTCACTTCTCACCCACCCACCGCCGTCCGCCGCCTCA CTCCCTCACCTCACCCACAGCCACAGCTTCAGCGACACACAAACACAACCCAACCCTCTTCCCTTACAAATCACAGATTC ACAGAGTCAAAGATTTTTTACCTCTCAGAGAGAAAGAGAGCAAGCAATGAAGCAATCAATGGAGTGAAGAGCAGCAATCG ATCAACAGAGTTTACAGAGCCATGGAGAGTGAAGAGCAGCAGCAATCATCGATGATTAGGGATTTAGGGTTCTTTTCCCC CTTTCTTTTTCTGAAGTGTACTAGTTTAGGATTAGGTCCTTGTATTTTTTCCTTCTTTCAGATTTTGCCTAATTTCACAT TTTTTTAGGCCCAAAAGCATACCTGGTCCAAAGAAAAAAAAAATTGGCGGAGCCCAGGCAAAGGCCCTAGCACGCCCGGT GGTAGTTCCGCCTCTGCAGGGCATGAGCCTACGACTGGAGGTGGTAATTCAACAATTTCAAAGCTTTCACTGCTACTGTG TTTTCAGTAATTAACTGAACACCCCCCTCATGTGAATCTCCAATGTTGTGGAATTTGGCCTAGTGCAAATAGCAAACATC ACAGGGCTGTTTGAATGTGCATTATTTGTACGGATAATGTTTAAGCTTCATATTTGTAATATGATTTTAATGAAGTTCAT GTTTTCTCAAGATGAATGAGGATGAAGAGGAGGATAAATTTCTGGCTTAATACATCAGATCAGAAGACCCCTGAAATTGT AAAGGGAATCAATTCCAGGGCTTGAAAAATTTTCGCATCAAATTGGGTCCCTAAGAATTTTTTTTAATTCAATTAAGGCC AAAGTGTGCCAGCCGCTGATGTGTCTTAATTTTTTTTTCCACATGGCTCTTATAATTTTTTTAAATACCAATTAATATTT TCATTTTATTTTATTTCCAACTCATTTCCTAAAAAATAAAACCTAAATCTAATTAAAACTAAACCTAATCCTAATCTGAA AACCTTACCATCTTCAACCCCCCCATTCCTGGACCCGTTCACAGTTCTTCTTCCACCGTTGTTCCTCTCTTCTACCGGAT TCCCTAGTACTGGAAACCACCACGACTACAACGGCGTAGCCACCTCCATTGAAATCCAAATCCTACCCCTTCGCCCAAAC CACCATCGGAACCCAAATCCCAATCAAAACCCTATCACTCAAACCCCCAACCCACCACCTCTTGACTTGTTGTTCAACTT TTCCTGAGTCGCGCCGCCGACCACCGCCCCAACACTCTTGGCCTTCCTGTGGTGTTCGTTTGACCCAGGGGCTGGAAAAG TTCGAACTTTACATTCTTATGTCAGTAGCAAAGAGAGAGCAGAGAGCAAGTGTTTATGGTGGCTATGCCTTTGTGAAATC ACGGGATCTGAAGGTGATGCTCCAAAATCAAAAGGTTATGCTTTAAAATCCGTTGGCAAAAATTAGAGATCTGCGATTTG GTTTCCCTTTGGGTTTATGGGTTTTTACTTTGAGATTCTGGGTTTCCCTTTTTCAGTTTGATGCTCCATGTTTCTGTGTA ACGCAGTAGTGCAGAGTTGGCAACTTGTATTCAGCTGGGAGCAAGGATTGAACTTTCAGGTTCGGGATGTACGTGCTCGA GTGTTGACTAACATGGCCTGGGTTACTATGAAAACATTTGTTGACATCGACACAGGGTCATTCAACGTGACCAATGTCTT TGAGTTCCATAATGGACGGTGGTATATGGTTCATCATCACAGCTCTGTGATGAATGGGGAGGTGGATCAAGTGCATGGAT AATAGTGAGAGATGATACATTGTTATGTCTGATACTGGTTTCAAAAAGGTGGTTTTATTTGCAGATGCAAGATGCTTGAA ATTTTAGTATGTTTCTGTGCTAAGTGTCCTGTATTTTAATTTGATGGGTTGTCCAGCTTGAAGATTGTGGCTTTTTAACA TTCAGAGCTTTTTTGTGAAGAAACCTTGATTTGAAATCAGTCTTTGACTCTTTGGTGGTTTGGGGCTTAAGATGAAGATG ATGGGTGATGTTGAATTTGTGGTTGTTTCTGGATTTTTTTAGTTGTTTTTTGTGGGATTGATTTCTTGGTAAAGGGAATA GGTTTTTGGTGGTTTGAGGATGAAGATGAAGATGGTGGTTGATGTTAGATTTGTTGTTGATTCTGAGGATTTTTTCTTTC TGAATTTGTTGTTGTTGATTCCATGGAGATGGAGGGAGATAAGGATTAAGGATATAATTAGGATCAAAGTTAAATAAATT GTAATTTTATAATATTTTATTTTTCTCCTTAAATAAATGAGATGAGTTGGAATTAAAAATTAATTTTTCATAATTTTTCA ATTAAAAATAATAATAAAAAAGCCACGTGTAATTGATGACTAGGACAAAATTGAGG
CDS sequence (LotjaGi1g1v0092800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACTAGCCAACAACAAAATCCCATATGGTTCAACCATGAGTAGCAAGTTTCAAACTTCTGTTTTTGATGAAACTGC TATGGAGATTAACTCTCTGCAAAAATCTCTGGTTGAAGAGGAAGATGGCTCACAGACCACTAATGGGCTCAGCAATGATT CAGCATCAGCCACAACCCTTTCTTCTCCTCCTCCTCCATGTAGCAATAATGGTTATGCTTACAAGAGCACAAATTATCCA CCTGAAGAAGCAGAATCTCTGATTGATTTCAAAGCCAAAGAGTGCAGCAGCAACATCATGCAGGGTAGTGAATCTTTGCT CAGCTTTCAGCAGAGTTGGTTGGTCTCTAATGAGGACAATTCGCCTGAAGGTTATGACCAATGGAATCATGTTAGTCCAA AAAGCACCACAAGCTTGCACATGATGCAGGGTTTCAGTGGCTATAGCTCAATATTCAACAATGAAAAAGAGAAGCAACAT GATGAAAGTTCATATGGATGGCTATACTCTGAAACTGAAGTCCCTGGTGATCGCCTACTAGAGACAGCAACACGAGAATC TGTCTTGAGGAAACGCTCTTCAATGGGAGAGAGCATGCTAGCTTCCAATGCCAAGAAGCCATGCACAGAAGCAAGTAAAG GTGAAAAGCCTAAGTCAAACCCATCTAAGGATCCTCAAAGTGTTGCTGCTAAGAACAGAAGAGAGAGAATAAGTGAGCGG CTTAAGATCCTACAAGAACTGGTTCCCAATGGCTCCAAGGTTGATTTGGTTACCATGTTGGAGAAAGCGATTAGTTATGT TAAGTTTCTTCAGTTGCAAGTGAAGGTTTTGGCAGCTGATGAATTTTGGCCTGTCCAAGGAGGAAAAGCTCCTGATGTTT CTCAAGTAAGACAAGCCATTGATGCTATTCTTTCATCTCAAAGATGA
Protein sequence (LotjaGi1g1v0092800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALANNKIPYGSTMSSKFQTSVFDETAMEINSLQKSLVEEEDGSQTTNGLSNDSASATTLSSPPPPCSNNGYAYKSTNYP PEEAESLIDFKAKECSSNIMQGSESLLSFQQSWLVSNEDNSPEGYDQWNHVSPKSTTSLHMMQGFSGYSSIFNNEKEKQH DESSYGWLYSETEVPGDRLLETATRESVLRKRSSMGESMLASNAKKPCTEASKGEKPKSNPSKDPQSVAAKNRRERISER LKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLAADEFWPVQGGKAPDVSQVRQAIDAILSSQR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 33 | 76 | 44 | - | – | |
| MobiDBLite | 33 | 78 | 46 | - | – | |
| PANTHER | 38 | 306 | 269 | 2.1E-96 | – | |
| PANTHER | 38 | 306 | 269 | 2.1E-96 | – | |
| MobiDBLite | 185 | 233 | 49 | - | – | |
| Gene3D | 211 | 271 | 61 | 1.4E-10 | ||
| SUPERFAMILY | 219 | 280 | 62 | 1.03E-13 | ||
| ProSiteProfiles | 221 | 270 | 50 | 15.281 | ||
| CDD | 223 | 275 | 53 | 8.97685E-12 | ||
| SMART | 227 | 276 | 50 | 1.0E-11 | ||
| Pfam | 230 | 271 | 42 | 6.2E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi1g1v0092800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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