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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0097500 |
| Transcript ID | LotjaGi1g1v0097500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Myb family transcription factor-like protein; TAIR: AT5G16560.1 Homeodomain-like superfamily protein; Swiss-Prot: sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1; TrEMBL-Plants: tr|A0A1J7HMV3|A0A1J7HMV3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0097500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:14791462..14795903) extracted from Lotus japonicus Gifu genome v1.2.
CTCCGCTGAAGCGAAATCCAAAGTGACCCTATTTTGTGGGTTTTGACTATAGAGAGACAGAGAGAAACCTTGTGCTTGTG ACTTGTGCTGTGTGTATCTTCAATTCTCTTCTTCATTCTAGAGTGTCATTTTCTGAGTATATTATAAAACCCAAATCCAC CTAGCTCTTTTCCTTCTTTCCCATACCTCTCAATTCTTTATTTTCTTTTCTGTTCCCTCTTGAAACCTTCATTCCCTCCT ACCTCACTGCTTAACAACTGTACACCCCATCTCTTATCTCTCTCTCTCTCATCAGTCATCATATTCTCAATGATCTCTCT TTAGCATGTCTGTTTTTTGTTTGGTAATCAATTGAGTCTGTGTACCTTTTCTTCTTCTTTTCAAGTTTCCAACATCTCAA GTCATAGGCTTGAGCAAGCTTTCCAGATTCTTCTCCTTGGAAAGACTTGTATGAGAAAAGAAAGCAAAAGACCCTTAACT TGCGTGAACATTGCACTTTAATTCCTTTGTCTCACCTCAGCATAAAAAACCTGAAGAAGATGACCTTGGAAGGGGTTTTC ATTGAGCCCACATCAACTACTTCTACTTCCCCTGATCTTTCTCTTCACATAAGCCTCCCAAGCAGCAGCAACAACAACAA CAACAATTATCATGAGTCCCAAAATATTTCATCCCCAAATTTCCCTTCAAGGAATGTTTCTCAAGCACATACAGAACTTT CTCTAGGAAGAAATTTCACAGGTGGAGGAGCAACAACAACTGAAGCAGAAAAACCACACAATAATTACCACCCTTTTCAT CCAAGCCTAACCCATTTCCACCATCTTCACCATCACACCAATAATAACAATAGTTCTACTACTACCACTCCCTTGAATGG CTTGAACTATGGCCTTTCATTGCTTGATGTATCACCAGAGGGGTTGAGGCCAATCAAGGGGATCCCAGTGTATCACAACC GTTCATTCCCTTACTTAGACAAAGATCATCATCATAACAAGATGTGCTTATACCATCCCATTCCCTCTTCTTCCTCTTCA CCTTCGCCGTACCTCGCTGCAGCAGCATCAAGGGTGAATGGATTAATTTCTGGTGAAGCTTTCAGATCTAACCATCAGTT GCACCATCATTCAGTCCTACATGGGGTTGGTCCTTCATCTCATGAGACCTCTTCTGGGTTTAATATGAGATCCAGGTTTT TGCCTAAGCTTCCCACCAAAAGGAGCATGAGAGCGCCGAGAATGCGGTGGACAACCACCCTCCATGCTCGATTTGTTCAT GCTGTTGAGCTTCTTGGTGGCCATGAAAGTAAACATTTTTTCCCCTTTCTTCCTCAATTTCTTCCAACCCTTTTGTTTTT CTCTCAACATGATTTATGTTAATTTGTTCATTTGTTGTATATCTTCTTCTTTCCTTTAATTAATGAATGAGATTGTCTAT TAATACAATCTTTACATCAACTCTGCATGTTTGGAAACTGATTCAACCACTGTGAAACTAAAACTTTCGTGGATAAAAAC AAAAGTTAAAGAGAATTACTTCTGTCGGTCATGATTTTAGTTTCACTATGTTTTTCAAACAAGTTTTCAAACTTGAATAA ATGTTATTCGACATAATTGATTTTGGTTTGCAACTAACTAATTGTAGAAGAATTTGCAGAAATGCTGCAGTTGGTTTTTT TTCATTTTCTTTTTGTTAATTTTCTCATATTTTGAGGTCACTTAAGTTGATGTATTTTGATGATGAATTTTAGGAGCTAC ACCAAAGTCAGTTCTTGAGCTCATGGATGTGAAGGATCTCACATTAGCTCATGTCAAAAGCCATTTGCAGGTTTGTTTAT AACACACACTCTCTCTTTGTCAGTGTCATATATGTTCATGTGGGGGGCGGTCTTGGTCTATCAAATTCTGGCACGGTAAC CGATGAAGAAAGCAGTGAATGAATGTGGGAGTGGATGAAATTAAAGTCTGCTCTGCAGTCAGCTATGTAGGAAGCTTTTA AGACGTCTGAGAAGACCAGACAGAAACAACTCTTGGCTTTGAAAGAGAGAGAGAACAGACAAAACAAACATCATCATTTT CCAATAATACAACTCTATTACAACCTCATCAAATTAACATCATCCTCGTGATTAATGAGTCAAACCATGACAATCCCAGA AGCCAACATAGAGGGAGAGAGTGAGAGAACGAAAAGAGATCTAAATCACCTGAAAGTCTCATTATAGTTGTAGATAGTTT ACTGAACTTTTTAAGCATTAAGTCGAGAGTTTAATATCTAGATAATGTGCAGTGAAAGATTTGTTGGAAGAGATTTATTT ATTTATTATAATTTTTAAGTTTCGAGATCAATATTGTTATTGCTGTCTCATGTCTTGAAAATATAAGAAAAAAAAAACTA AATAGGAATTGATTTTATATTCTTTGATTTCTTTTTATTGAAAATTTTGTTTGTCGCAATTCTCACACGCATACTAATTA ATTAATGGTGCTCTTTCTAAAATGCCTTATTTTGTGTATGACTTATTTGCAGATGTATCGAACTGTTAAGACCACAGACA AGCCTATTGCTTCTTCAGGTAATTCATATTGTTTATATAGCATGTTTGTATAATGTTATAAGTATTACATTAAATAGATA TATGATCATGATGGTTTTTATATACGAAAAAATAATCATCACCTCTAAGCTAGCTCCACTTAACGTCGCTCTTAAATAGC TTGCTCTTCTTAGAGTACCCTACGTTTTTTTACTATGATTAAATTTCAATTTTACCGCAAACATTTTTTCCTTACTCGTC TCTTATATAGCTTAACTGCAAACTCTTTCAAAGGGCTTTTGAAAGACTCCACATTAGTCCAAATTAAATGATATAAAACT ATAAAGATGAATGCATGCCTGATATATTTTTGAGAGCGAGCTTTTGAATGCAGGCCATTCAGATGGATCTGGAGAAGATG AATTGTCTCCGATGGGTAGCAGCGTTGACCGAGGCGGTTTGAGTCAATTCTCAGACCACAGAGATCGAACGGATCGAGCA ATGCATCAAGATATGGAACACTTATCCTCCACCACCACCACTCTATGGAGTAACTCTTCAAGGTAAAGTTATCACTTCCT CATTCTATATTATTAGAAAACATATATTATATATTTTATCTTTAAAAAGCTACTCACAGTTACTGCTGTTGGACATACTA AAATTGAACCTGATGATAATGTTACCGGCTCCAATTTCAGTATGCCCAGCAATTATAACATCCTCATATTTAATTTTTGA CTTTAGAATCGAGAGGGATTTCAAAACATGTACTAAATTGGTTTTATTATTTTGTGTCTGCAGCTTCTATAGACGTACAT GTTTATGATTGTGCTTTTATTTGCTTTTGCCTTTCCATGGTATCTCTTGCATATCAACCCAAACCCACGTCCAACGCATT CTTCTTTTTTATGAAGAATGAAAAGGTTACTTGTGTTGTGTCAGCTTTTGCTTTACTTGTGTTTAGTTGTTTTCTTTCTT TTGTATATATCTCTTGTCCCCTAGCGAAATTTTATATATATGACAAAGGAAAGGTGCAAGACATTATACATAATCAACCG TTGCTATATGGTTAAGGATAACTTTTCCTTGGAATTTGATTTATATCTATGTTTCAACATTCTTTATAATCCTTAATAAA GTCATCTATGAAAATCCTTCTGTGATTGATTCTCAAATCATAATCAATTATTAGGAAAAGCTTCAAAGAGTATAGCTTAT GGCTAATTGCAATTTTCTTTTTACTCAGTTGTGGGGAGCCATGGTTACGTACTACTTCTAACAACATAGACGGTCTTAGA CCACCTATTCTCCATTCACAAACCATATCAAGAGGACATCAAATTCAGGTACCCATGTATATTATTTTGTTTTTCAACTC TCTTTATTTCTCATTTTCAAGTGGTTGTTTCATATATGACGTCAGAATAACAATAACAAATAACCCCACAGGAGTGTGAT CCAACCCAACTCAAAAACGGTTTGCCTTGTTCTACTTTGGAGTACAAGAATCCAAGCTTGGAGTTCACTTTAGGGAGACC AGATTGGAATGGCAAAGAACAAGCCTAGTTAATTTTTATTGGTTATATTATTGCCTTCTTGTTTTCTATATCATTTAGAA TTAACCTATGATGATAACTTCATCATTTTCATGAAATGTAGAGGTGTATTTAAATATATATAAACTAGTGCTAGAAGGAG ATGAAAAGCCCTAGTTCTAGCTGCTTAGATCCTTTTGGAGGTTTTTTGAGCTCATGAACAATTTTGCTCTTTTTATTTTT GTTCTATTGCAAATGTAGAAGCACAACCAAGAGGTGAGGAAAAGGATGGGAATGCATGTTTGAAAACTAGGGGAACATAT GAATAGAAAACTTTTCATTTTGATGAAATAGTTATCATCCCC
CDS sequence (LotjaGi1g1v0097500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCTTGGAAGGGGTTTTCATTGAGCCCACATCAACTACTTCTACTTCCCCTGATCTTTCTCTTCACATAAGCCTCCC AAGCAGCAGCAACAACAACAACAACAATTATCATGAGTCCCAAAATATTTCATCCCCAAATTTCCCTTCAAGGAATGTTT CTCAAGCACATACAGAACTTTCTCTAGGAAGAAATTTCACAGGTGGAGGAGCAACAACAACTGAAGCAGAAAAACCACAC AATAATTACCACCCTTTTCATCCAAGCCTAACCCATTTCCACCATCTTCACCATCACACCAATAATAACAATAGTTCTAC TACTACCACTCCCTTGAATGGCTTGAACTATGGCCTTTCATTGCTTGATGTATCACCAGAGGGGTTGAGGCCAATCAAGG GGATCCCAGTGTATCACAACCGTTCATTCCCTTACTTAGACAAAGATCATCATCATAACAAGATGTGCTTATACCATCCC ATTCCCTCTTCTTCCTCTTCACCTTCGCCGTACCTCGCTGCAGCAGCATCAAGGGTGAATGGATTAATTTCTGGTGAAGC TTTCAGATCTAACCATCAGTTGCACCATCATTCAGTCCTACATGGGGTTGGTCCTTCATCTCATGAGACCTCTTCTGGGT TTAATATGAGATCCAGGTTTTTGCCTAAGCTTCCCACCAAAAGGAGCATGAGAGCGCCGAGAATGCGGTGGACAACCACC CTCCATGCTCGATTTGTTCATGCTGTTGAGCTTCTTGGTGGCCATGAAAGAGCTACACCAAAGTCAGTTCTTGAGCTCAT GGATGTGAAGGATCTCACATTAGCTCATGTCAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACCACAGACAAGCCTA TTGCTTCTTCAGGTAATTCATATTGTTTATATAGCATGTTTGTATAA
Protein sequence (LotjaGi1g1v0097500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTLEGVFIEPTSTTSTSPDLSLHISLPSSSNNNNNNYHESQNISSPNFPSRNVSQAHTELSLGRNFTGGGATTTEAEKPH NNYHPFHPSLTHFHHLHHHTNNNNSSTTTTPLNGLNYGLSLLDVSPEGLRPIKGIPVYHNRSFPYLDKDHHHNKMCLYHP IPSSSSSPSPYLAAAASRVNGLISGEAFRSNHQLHHHSVLHGVGPSSHETSSGFNMRSRFLPKLPTKRSMRAPRMRWTTT LHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPIASSGNSYCLYSMFV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 55 | 55 | - | – | |
| PANTHER | 4 | 298 | 295 | 7.1E-85 | – | |
| PANTHER | 4 | 298 | 295 | 7.1E-85 | – | |
| Gene3D | 229 | 290 | 62 | 1.1E-24 | – | |
| SUPERFAMILY | 230 | 286 | 57 | 1.38E-15 | ||
| TIGRFAM | 233 | 286 | 54 | 1.8E-23 | ||
| Pfam | 234 | 285 | 52 | 9.8E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi1g1v0097500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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