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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0099500 |
| Transcript ID | LotjaGi1g1v0099500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Armadillo repeat-containing protein 7; TAIR: AT5G37290.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q3UJZ3|ARMC7_MOUSE Armadillo repeat-containing protein 7; TrEMBL-Plants: tr|A0A1J7G0B2|A0A1J7G0B2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0099500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:15158215..15160522) extracted from Lotus japonicus Gifu genome v1.2.
AGAACAACATAAATGTTCACCAATGACCATAGGCAACAAGAGAGAACAGGAAAATATGGAACTCCCAGATTGCAATACCT TCAGGTGCTTCTTCATTTCTTTCTCTCTAACTAATGAAATCATTTTTTTTTTTGTAATTCAGTAATATACACCATTATGT TGTATGTGTTGCAACTTGCAATTATTTGGTTTCATATGAGAACCTAAGATGAATAACATATGAAATCAATTTTTTTTTGT AATTCAATAATGTACCATTATGTTGTATGTGTTGCAATTATTTGGTTTTGTATGAGAATCTAAGATGGATAACATTTTTT TCAGGAACTGGTGACTCAGTTTCAGAATGCTTCTGAGGAGGGTAAACTGTTTTTGTATATTAATATTTCCTGAATGAAGC ACTCTTTAAATCAAGCACCTTTGTTTATAGATTGTTTAATTCTACTATCTCATTGTTTGATGGTGTGTTTCTTGTGTTTC CAGAAGCAAAAGAGAAGATTTTAGCGAATTTGGCCAACTTCGCTTATGATCCTTACAACTATAACTACTTACGTCAGGTA TGGACCCATTAGCTTCATTTACAAGGAAAGAAAAGTGCGCGGGATGAACTAAGATGTCTTTGCTTAACTTTGCAGCTCAA TGTTTTGGAACTTTTCCTTGACTGCATAACTGAACCCAATGAGAAGCTAATAGAATTCGGTATTGGAGGGGTCTGCAATT CTTGTGCTGGTAATTCTTGTTCCGTAATATTGTGGTTTCTACACCTCTACTTGATTAATTGTCTTTGATTAATAAAAATA AGTAACAATTTTTTTGCAGATCCAGCTAATGCAGCAATTGTAACTAAGGTTGATGGGATACCTCTTATCATTCAATGTTT ATCAAGCCCGGTCAGAAACACTGTAAGGATATGAACTTGCTTATTGACATTGTTTTCCTTTGTTCATTCATGATTATGTT TGGCTCTTAAGTTCCAGACCCTAGAGCCTCTAGCCTAAAGGGATTGCTAAACCATGAATAGCGATAAATTGCTTTTAGAT ATCAGTTTTCCCCTCGACAAGTTATGCACATGTATGATTTACGTTACTTACTTCATCAATAAATGTTAAAGCTTATATGT GAAAAAAAAAACTATCTGATTTTTCATATGAAATTTAAATATTTAAAACATGCTTGCCTTTCTATTTTCCATTTTTTTAT TTTGGAGAACATTCTATTTTAATTATATCCTTTATAATTACTGAACTCACTTTACTACCATTTTCAAGGAAATTTGCATT AGCAGTTTCTACTATTCTTGGGCTATGGTTTGTACAATAAAAGATATTACCCTTTAGATTTCTCTAGGTAGCCAATGAAG TAACCACTCACTGGTCGAGGATCTAACTTCTTTTCATGTGGATTATATACTCTTGCTTTTGCTAGACAACCTCAAACATG CAAGTGCCTTAAACTAGGTTTTCTGTCAGTCCACAACTCAAAAGGACTTTTAGGACCTGCCTCAGTAGGAACCTCTTTAA CAAAGACAACAGTTTTTAATGCATGTATGATGTATCCACAAAAATTTGTGTATAGAAAAATTACTCATGATACTTCTAAC CATATCCAACAATGTTCTATTACACCTTTCTGCCACAATTTGTTGTGGAATTAAGCGTAACATGCTTAATGAAAGTTCCC CATACTTGTGGCATAAATGTCCAAGGGAAGATTAGTAAAGAATGTGATTCTACCAAATCTAGATTTTACTGATCTTGGTT GTGTGTGGATTGCATTAAGGGAAAGCAAACCAAATACAAAGAGAAATGCGCCATAAGAAGTTAATGCTGTTGAGGTCTAT ATCGACAAGTTAAAGTCGAAAGTCCTGATTGGCATGGTGAATATTATGGAAAACATGATGAAATCCTGTTTCATTTGCAA AACTTCTAGAAAGGCATGACATTGTTGGTAGTTTAATTATATCCCTTATAATTACTAAACTCACATTAATATCAATGCAT TCTCAACATTGCTTCTGATAATTACAGAGTAAATAATGTTTTCTTATATTATCTGTACATTCTAAAGTTGATTTATGGCC ATATAACCGTTCATTACAAGTTAATAAACAACCAATGCATTTACCTGATTTTAGGTAAATTCTGCACTTGGAGCACTTTA CTATGTCTGTGATGAATCTAACAAGGAAGAGGTTTTAAAGCCTGAAGTTATTGATGTCATCAAGAGGTATGCTGCAGCTG AAGAAGTTAGCGTGAGCTTCAGTAATCTGGCTAAAGCATTTCTGGACAAACATTTATCAGGGTACTAG
CDS sequence (LotjaGi1g1v0099500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCACCAATGACCATAGGCAACAAGAGAGAACAGGAAAATATGGAACTCCCAGATTGCAATACCTTCAGGAACTGGT GACTCAGTTTCAGAATGCTTCTGAGGAGGAAGCAAAAGAGAAGATTTTAGCGAATTTGGCCAACTTCGCTTATGATCCTT ACAACTATAACTACTTACGTCAGCTCAATGTTTTGGAACTTTTCCTTGACTGCATAACTGAACCCAATGAGAAGCTAATA GAATTCGGTATTGGAGGGGTCTGCAATTCTTGTGCTGATCCAGCTAATGCAGCAATTGTAACTAAGGTTGATGGGATACC TCTTATCATTCAATGTTTATCAAGCCCGGTCAGAAACACTGTAAATTCTGCACTTGGAGCACTTTACTATGTCTGTGATG AATCTAACAAGGAAGAGGTTTTAAAGCCTGAAGTTATTGATGTCATCAAGAGGTATGCTGCAGCTGAAGAAGTTAGCGTG AGCTTCAGTAATCTGGCTAAAGCATTTCTGGACAAACATTTATCAGGGTACTAG
Protein sequence (LotjaGi1g1v0099500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFTNDHRQQERTGKYGTPRLQYLQELVTQFQNASEEEAKEKILANLANFAYDPYNYNYLRQLNVLELFLDCITEPNEKLI EFGIGGVCNSCADPANAAIVTKVDGIPLIIQCLSSPVRNTVNSALGALYYVCDESNKEEVLKPEVIDVIKRYAAAEEVSV SFSNLAKAFLDKHLSGY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 175 | 175 | 2.6E-96 | ||
| Gene3D | 15 | 171 | 157 | 2.2E-14 | ||
| SUPERFAMILY | 21 | 153 | 133 | 1.46E-18 | ||
| SMART | 52 | 92 | 41 | 22.0 | ||
| SMART | 93 | 133 | 41 | 0.25 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0099500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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