Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0110900 |
| Transcript ID | LotjaGi1g1v0110900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-methyltransferase; TAIR: AT4G35160.1 O-methyltransferase family protein; Swiss-Prot: sp|B6VJS4|ROMT_VITVI Trans-resveratrol di-O-methyltransferase; TrEMBL-Plants: tr|I3SKV8|I3SKV8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0110900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:17282873..17284633) extracted from Lotus japonicus Gifu genome v1.2.
CTCAATGTGATTTTTATTGGATTATATATAGCCCCAAGTAATGTGATGTTCCATACTTCACATCTAGCTAATAGTCCAAA CAGCAAAATATGGAATTCCAAGATGGAGAGAATGTTTCTAAACTGTTCGGGCTCAAAGCCACATATGGAATCACATTTTC AGGTTCATAAACACCATGTCCCTTAAATGTGTAGTTGAATTAGGCATACCAGATATCATACAAAACTATGGCAAGCCCAT GCCACTCTCACAACTCATTGCTTCACTAACAATCCACCCATCCAAATCTTGTTGCATCCATCGCTTGATGCGAATCATGG TACATTCTGGCTTCTTCTCTCAACACAACATCACTGAGAATCAGCTCGAAGCAGAGTATAAGCTAACTGATGATTCTATT CTGCTCCTGAAAGATCACCCCTTCAGTCTCACACGTTTTTTGCATTGCGTGTTTAATCCAATTTGGACAGAGTCATGTAG TCATTTGTCAACTTGGTTAAAAAATGATGATCTTACACCCTTTGTAACCGCTCACGGGTTGTTGCCTTGGGATTTTGCTA AACGTGACCCAAAAATTAGTCACTTAATTAATGAAGCCATGGAAAGTGATTCTCGATTGACCGCCAATGTGTTTATGGAG AAGTGCAAGGGCATGTTGAACGAATTTGAGTCGTTGGTTGATGTTGGGGGAAGCACAGAGACCATGGCAAAGGCCATTGC TGAATCATTCCCATATCTCAAGTGCACAGTGTTTGATCTCCCATACGTTGTTGCTGACTTGCAAGGAAGTGACAACCTTG AATATGTTGGAGGTGACATGTTTATGGAAATTCTTCCAGCTGATGCCATTTTATTGAAGGTAAAATATGCAATTATTATA GATCTGGTTTTATTTTGTAGATATATGGTTTTTTCTGGAAATTACATTGAAGTTACATGAAGTTAAATGCATTATTGGTC GATTATATAAAAAAAATTAGGCAATTGATGACTTTTTATATAAATATATTATTGCTTGAAATTAATATATATGAATCAAT AGCTATAAGGAATATTTTATTTCCTTTGGATAATGTTGATGACTTTTAATTACTTGAATGACAAGCAGTTGATATTGCAC GACTGGAATGACGAGGTATGTCTGCAAATACTGAAGAATTGCAAGGAAGCAATAAAGAGCAAAGGCAAAGAAGGGAAGGT GATTATTATAGACATGGTGATGGAGGAAGAGAAGGGAGACAATAAATCAATTGAAACACAATTATTCTTTGATATGGTGA TGATGGTGTCGACCACAGGAAAAGAGAGAAACAAGAAAGAATGGGTTAAGTTGATTACTTCTGCCGGTTTCACTGATTAC AAGATAACTCCTGTTTTAGGGTTAAGGTCTATTATTGAGATCTATCCATAGTAAAATCTAGCCAAATGCTAGTATAAACT GATGAAAAGTGAGTGAGAAGAGATCAACATTCTAATCTCATGGAATGTATGTTGCGCGCTAACCGAGCATGAACAAATGA AGAAAGATGAAAGGTGAATAAAAAATATTTCACATGAAAATAAGATGAAAGATGAAGAAACGTGTATTTTGATTTTGAAA TGAAAAATGATATATGAAGTAACAAGATAGAAGAAGATGGAGATGATAAAATAAACATGAAGATTATGGGGAGATGAATA TTTTGAATGAATTTTAATATTTTACGGATTTTTTTGTAAATTTTGTTTTTAAAATTAAATTTTAAATATAAATTAATTAT A
CDS sequence (LotjaGi1g1v0110900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCCTTAAATGTGTAGTTGAATTAGGCATACCAGATATCATACAAAACTATGGCAAGCCCATGCCACTCTCACAACT CATTGCTTCACTAACAATCCACCCATCCAAATCTTGTTGCATCCATCGCTTGATGCGAATCATGGTACATTCTGGCTTCT TCTCTCAACACAACATCACTGAGAATCAGCTCGAAGCAGAGTATAAGCTAACTGATGATTCTATTCTGCTCCTGAAAGAT CACCCCTTCAGTCTCACACGTTTTTTGCATTGCGTGTTTAATCCAATTTGGACAGAGTCATGTAGTCATTTGTCAACTTG GTTAAAAAATGATGATCTTACACCCTTTGTAACCGCTCACGGGTTGTTGCCTTGGGATTTTGCTAAACGTGACCCAAAAA TTAGTCACTTAATTAATGAAGCCATGGAAAGTGATTCTCGATTGACCGCCAATGTGTTTATGGAGAAGTGCAAGGGCATG TTGAACGAATTTGAGTCGTTGGTTGATGTTGGGGGAAGCACAGAGACCATGGCAAAGGCCATTGCTGAATCATTCCCATA TCTCAAGTGCACAGTGTTTGATCTCCCATACGTTGTTGCTGACTTGCAAGGAAGTGACAACCTTGAATATGTTGGAGGTG ACATGTTTATGGAAATTCTTCCAGCTGATGCCATTTTATTGAAGTTGATATTGCACGACTGGAATGACGAGGTATGTCTG CAAATACTGAAGAATTGCAAGGAAGCAATAAAGAGCAAAGGCAAAGAAGGGAAGGTGATTATTATAGACATGGTGATGGA GGAAGAGAAGGGAGACAATAAATCAATTGAAACACAATTATTCTTTGATATGGTGATGATGGTGTCGACCACAGGAAAAG AGAGAAACAAGAAAGAATGGGTTAAGTTGATTACTTCTGCCGGTTTCACTGATTACAAGATAACTCCTGTTTTAGGGTTA AGGTCTATTATTGAGATCTATCCATAG
Protein sequence (LotjaGi1g1v0110900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLKCVVELGIPDIIQNYGKPMPLSQLIASLTIHPSKSCCIHRLMRIMVHSGFFSQHNITENQLEAEYKLTDDSILLLKD HPFSLTRFLHCVFNPIWTESCSHLSTWLKNDDLTPFVTAHGLLPWDFAKRDPKISHLINEAMESDSRLTANVFMEKCKGM LNEFESLVDVGGSTETMAKAIAESFPYLKCTVFDLPYVVADLQGSDNLEYVGGDMFMEILPADAILLKLILHDWNDEVCL QILKNCKEAIKSKGKEGKVIIIDMVMEEEKGDNKSIETQLFFDMVMMVSTTGKERNKKEWVKLITSAGFTDYKITPVLGL RSIIEIYP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 328 | 328 | 2.6E-142 | – | |
| Gene3D | 1 | 77 | 77 | 1.2E-24 | ||
| PIRSF | 1 | 328 | 328 | 1.5E-109 | ||
| ProSiteProfiles | 1 | 328 | 328 | 72.679 | ||
| Pfam | 1 | 49 | 49 | 2.4E-15 | ||
| PANTHER | 1 | 328 | 328 | 2.6E-142 | – | |
| SUPERFAMILY | 1 | 82 | 82 | 5.44E-19 | ||
| Gene3D | 79 | 328 | 250 | 9.5E-73 | – | |
| SUPERFAMILY | 82 | 326 | 245 | 4.81E-47 | ||
| Pfam | 103 | 309 | 207 | 5.5E-53 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | O-methyltransferase activity | Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi1g1v0110900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…