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LotjaGi1g1v0111000.1

Overview

Field Value
Gene ID LotjaGi1g1v0111000
Transcript ID LotjaGi1g1v0111000.1
Lotus japonicus genome version Gifu v1.2
Description O-methyltransferase; TAIR: AT4G35160.1 O-methyltransferase family protein; Swiss-Prot: sp|B6VJS4|ROMT_VITVI Trans-resveratrol di-O-methyltransferase; TrEMBL-Plants: tr|I3SKV8|I3SKV8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0111000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:17303319..17306678) extracted from Lotus japonicus Gifu genome v1.2.

TTTTGCACATGTACTTTCTGCCCTTTTATATAGACCCAAGTAATGTGAGGTTCAATGCTTATATATATACACCCAAATAA TCTAGCTAACAGTTCAAGCAGCAAACTATGGAATTCAAAGATGGAGAGAATGCTGCTAAATTGCTTCGGGCTCAAAGCCA CATATGGAATCACATTTTGAGCTACATAAACTCCATGTCCCTTAAATGTGTAGTTGATCTAGGCATTCCAGATATCATTC ACAACTATGGCAAACCCATGCCACTCTCAAAGCTCATTGCTTCACTACCAATCCACTCATCCAAAGCCGGCAACATCCCT CGCTTGATGCGAGTCATGATCCATTCTGGCTTCTTCTCTCAACACAATATCACAGAGAATGAGCTAGAAGTGGAGTATAC ACTAACTGATGATTCTATTCTGCTCCTTAAGGGTCACCCCTTCAGTATTCTGCCTTTTTTGCTTTGCTCCAATGATCCAA TTTTGAAAAAGCCGTGGCATCATTTGTCAACTTGGTTCAAAAATGATGATCTTACACCCTTTGAAACAGCACACGGGATG TTGCCATGGGATTATGCTAACCGTGACCCCAAAGTTAATAACTTATTAAATGAATCCATGGCATGTGATGCTCAATTGAT TGCCGGTGTGTTTATAGAGAAGTGCAAGGATATGTTGAATGGATTGGAGTCATTGGTTGATGTTGGGGGAGGCACAGGGA CCATGGCAAGGGCAATTGCTAAATCATTCCCACGTTTGAAGTGCACTGTGTTTGATCTCCCACATGTTGTTGCTGATTTG CAAGGAAGTGAGAACCTTGAATATATTGGAGGGGACATGTTTAAGGAAATTCCTCCGGCGGATGCCATTTTGCTGAAGGT AAAATATCCAATTATAGATCACCTTAGATTTGGATTTGTCTAAGTTTATATTGAAGTTAAATTAAAAATTACATTATTGT GGTTGATTATAAGAAAATTTAATATGAATCAATAGCAAAGCAATGTTTAGTTTCCTTTTGATAATGCTGATGACTTTTAC TTGAATGACAAACAGTGGATATTGCATGACTGGAGTGATGAGGAATGTCTAAAAATACTAAAGAATTGCAAGGAAGCAAT AAAGAGCAAAGGCAAAGAAGGGAAAGTGATTATCATAGACATGGTTATTGAGGAAGATAAGGGAGATGATAAATCAGTTG AAACACAATTACTCTTTGATATGGGGATGATGGTGTTGACCACTGGAAAAGAGAGAAGCATGAAAGAATGGGGTATTTTG ATTTCCTCTGCTGGATTCAGTGACTACAAGATATCTCCTGTTCTGGGATTAAGGTCTGTTGTTGAGATCTATCCATAGTA AAATCTAAGCAAATAAAAGTTTATTATGATTGTGTATGTATGGATATTTTTATATGATATATAGATGCACACTAAGAGTG TCTTTGTCAATTAAAATGGACCAAGCAAATAAAAATGTAAACAACCTAAATACAATAGAAGTATCTTTAGTAAAGTAATA GTTCAACAATGAAGCAATCTAATCCTGCATTGCTCGTGCTGAATCTTTAGTGTCAAATACATACACAAACATATAAAGTT ACTGACCAAAATGATACAGATCAAGGCTTAATGGTTTGAGAAGTAAGGGTGAAAAAATAAAGAGGATTTTGTTTCTATAT AGAACATAAGGTACTGTGGGAGGAATTAGAGTGCTCTAGACCTATTCTTTAATGTAAGTGTTCAGTACCTTGTGGATGTG AAACTATTAAAATTTGTTAAATGCTTAGAGGTCATGATTTGTAATAAAATTTGAGTAGATTGAATGAAAATTACAACACA ATGAAGTCACAGATCATGGTAATGGATCCATTACCAAATATCAACAAAGCTTTCTCTCTAGCACTTCAATATGAAAGGCC AATGTTAGCAGAAGAATTCCTCTGAGGATTCTTTCATACCAGAACAGTACAAAAGCATCATGAATCTTTTTCAAAAGATT ACACAACAAAAAATCTCATCAAGCACATCAACAACAATAAATCATGTGATCTTTGCCTCTTAACAGATTGGAGGAGCACA ACAAGGTACTCAGTGTATTTGTCTTCTTTTTAATTTAATTGTGCAAAATCATGGATTCTGGATTTAAGAGCGACAGATCA TATCTGTTACTCATCACTGAATCATTTCAGTCAAATTAAGAAAATAGATCCATTAAAAGTAAAGTTTCCAAATGGAAGTA TTGTGATATCAGATTACTTAGGAACAATACAATTAATTTATTTTATTCAGCTAATTGATGTTTTTAATCTGCCACAAATC AAGTTCAATCTACTTTCCATTTCTAAATTGACTTGTACACTTAATTATGATCTAGTTCTTTCACATGATGGTGGTTATTT TAAGGAGGTATGCTCCAAGAAGATGATTGGTTTAGGTAGACTTGTTCATGGTCCATACCTTTTAGAGAAAACATAAAGAG TTACTTACACTAGGGAATAAATCTGAAACTGATGCTGAAGCACTTGTAGCAACTGTTATACCCGCTGGAGCCTTATAGCA TTATAGGCTTTGTCACATAGGTCAAGATATAATTGATCTTTTGAGGAAGCAATTTTATTTTATCAAAGGTAGCAAAGTTG ATTTGTGATATCTGCCATTTAGCTAAGCAAAAGAAACCTATGTTTCAAATTAGCAAGAATAAAGCAAAGTGTATTTTTAA AGTGATACATGTTAATATTTGGGGACCCTACTCCATCTCTTCTATACATAATCATGAATACTTTCTTAACTGTTGTTTAT GATTGTAGTAGGCTTACCTAGATTGTTTTACTCAAAGAAAAAGGGAAGCACAATTCAATAACAAAACTTAGTTCAGTTAG TTGAAAGTCAACTTGATACAAAGGTTAAAGTCATCAGGTAAGAAAATGGCAGTGTTTCTGATGCCTGATTTCTACTCCTC AAAAGGAATCATTAATCAGCTAATGAGTTGCACTCATACTCCCTAAAAGAATGGAAGAGTGGAGCTTAAGACCAACATTT GCTTAATGTTTCATGTGCTTTGTTGTTTTAAGCTAATTTCCCTAAGAATTATTGGTCATATGCTGTTCAGCATGTAACCT TTCTGATAAACAGAATTCCTCTAAAAGTTCTTCATGACATGTCACCATATGAGTGTCTAATTGGAACTGCAACAAATTTG ACAGAATTTAGAGTTTTTGGTTGCTTGTGTTATCCTTCCACAAAGCATTGTGCAGACTGCAGAGTACTAAATTGGATCCA CGAGCTCGAAAATATGCTTTGATTAGCTATATCCAAGGCACAAAAGTATTTGTAGTTCTTGATGTTTACACATGAAATTC
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0111000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAATTCAAAGATGGAGAGAATGCTGCTAAATTGCTTCGGGCTCAAAGCCACATATGGAATCACATTTTGAGCTACAT AAACTCCATGTCCCTTAAATGTGTAGTTGATCTAGGCATTCCAGATATCATTCACAACTATGGCAAACCCATGCCACTCT CAAAGCTCATTGCTTCACTACCAATCCACTCATCCAAAGCCGGCAACATCCCTCGCTTGATGCGAGTCATGATCCATTCT GGCTTCTTCTCTCAACACAATATCACAGAGAATGAGCTAGAAGTGGAGTATACACTAACTGATGATTCTATTCTGCTCCT TAAGGGTCACCCCTTCAGTATTCTGCCTTTTTTGCTTTGCTCCAATGATCCAATTTTGAAAAAGCCGTGGCATCATTTGT CAACTTGGTTCAAAAATGATGATCTTACACCCTTTGAAACAGCACACGGGATGTTGCCATGGGATTATGCTAACCGTGAC CCCAAAGTTAATAACTTATTAAATGAATCCATGGCATGTGATGCTCAATTGATTGCCGGTGTGTTTATAGAGAAGTGCAA GGATATGTTGAATGGATTGGAGTCATTGGTTGATGTTGGGGGAGGCACAGGGACCATGGCAAGGGCAATTGCTAAATCAT TCCCACGTTTGAAGTGCACTGTGTTTGATCTCCCACATGTTGTTGCTGATTTGCAAGGAAGTGAGAACCTTGAATATATT GGAGGGGACATGTTTAAGGAAATTCCTCCGGCGGATGCCATTTTGCTGAAGTGGATATTGCATGACTGGAGTGATGAGGA ATGTCTAAAAATACTAAAGAATTGCAAGGAAGCAATAAAGAGCAAAGGCAAAGAAGGGAAAGTGATTATCATAGACATGG TTATTGAGGAAGATAAGGGAGATGATAAATCAGTTGAAACACAATTACTCTTTGATATGGGGATGATGGTGTTGACCACT GGAAAAGAGAGAAGCATGAAAGAATGGGGTATTTTGATTTCCTCTGCTGGATTCAGTGACTACAAGATATCTCCTGTTCT GGGATTAAGGTCTGTTGTTGAGATCTATCCATAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0111000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEFKDGENAAKLLRAQSHIWNHILSYINSMSLKCVVDLGIPDIIHNYGKPMPLSKLIASLPIHSSKAGNIPRLMRVMIHS GFFSQHNITENELEVEYTLTDDSILLLKGHPFSILPFLLCSNDPILKKPWHHLSTWFKNDDLTPFETAHGMLPWDYANRD PKVNNLLNESMACDAQLIAGVFIEKCKDMLNGLESLVDVGGGTGTMARAIAKSFPRLKCTVFDLPHVVADLQGSENLEYI GGDMFKEIPPADAILLKWILHDWSDEECLKILKNCKEAIKSKGKEGKVIIIDMVIEEDKGDDKSVETQLLFDMGMMVLTT GKERSMKEWGILISSAGFSDYKISPVLGLRSVVEIYP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF005739
1 357 357 2.1E-127
IPR016461
PANTHER
PTHR11746
2 357 356 6.4E-162 –
PANTHER
PTHR11746:SF211
2 357 356 6.4E-162 –
Gene3D
G3DSA:1.10.10.10
3 106 104 2.6E-33
IPR036388
SUPERFAMILY
SSF46785
10 111 102 5.44E-26
IPR036390
ProSiteProfiles
PS51683
20 357 338 82.33
IPR016461
Pfam
PF08100
30 77 48 4.2E-14
IPR012967
Gene3D
G3DSA:3.40.50.150
108 357 250 6.2E-83 –
SUPERFAMILY
SSF53335
111 354 244 4.87E-58
IPR029063
Pfam
PF00891
130 339 210 7.8E-62
IPR001077
CDD
cd02440
196 284 89 1.74707E-4 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0111000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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