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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0112700 |
| Transcript ID | LotjaGi1g1v0112700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Exocyst complex component, putative; TAIR: AT5G58430.1 exocyst subunit exo70 family protein B1; Swiss-Prot: sp|Q9FGH9|E70B1_ARATH Exocyst complex component EXO70B1; TrEMBL-Plants: tr|A0A151U109|A0A151U109_CAJCA Exocyst complex component 7; Found in the gene: LotjaGi1g1v0112700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:17622318..17626121) extracted from Lotus japonicus Gifu genome v1.2.
GTCCATGTCCATGTTCCGAATCAATAGTACCTCATAAATCTAGTCAAAAGTCAAAAGAACTATGACAACAACATTGGAAT TTTCAAGTTCCTAGACTTCCCCCAATACAAGTCACACAAAAAAATAAAGCTAACCCCTCAACGACTATCAATCAATGCAA CAAACAAACCTCTTTCCACGTTCACTCTCTCTCTAACTTTATCTTCTTCCCTTATCTTCGCTCATCAATTTCCGCGCAAT TTCCCCACTTTACCTACCACTTCTACCCTCACTTATTTCACAAACCGCGTCTAACCAAGGACATTTCCGTCATTCCATCC CTCTCCTCTCTTCTTTTTCCTTAGTAGAGATTGAAGAATTGAAGAACACTGAAACTAACTAACTTGCTTTTGCTGAATGA AAATGTCTGAAAACGGTGAAGAGAAATTACTCGCTATGGCGCGGCACATAGCAAAGACACTAGGCCATAACACCAACATG GCTGATGATATCCTTCAAATCTTCTCAAACTTCGATGGAAGATTCTCGAAGGAGAATCTCTCTGAGAAGGGTGTAGAATC AGACCCGAGATCCTGCGCAGTACTGGATCATTCCCTCAAAACGCTAGATCGCCGGATCTCTCACTTCGTCTCCTCCGACC GCCCTATATGGGCTGACTCCGCCGACGCCGCCGCCTTCCTCGACGTCGTCGACGACCTCAACGCCGCTGTCGCCGAGTGG AGCCACCTTGCCGCTGATAAATCCGTCGCCGCGTGTTTAGTACGCGCCGAGGACATGCTCCAGCACGCCATGTTCCGCCT CGAGGATGAGTTCCGATCTCTCATGGAGCGCGGCGGGGAGGCCTTCGACCTCACTCGGCCGTACCGGAACGGCGAGGTAA GGGAGAATGAGAATCAACCGTTTGACTCTGAGGAGGAGGAGGAAGAGGTGGAGGACGTTGAAGGAATCGACGACGGAGGA GAAGGGAATCAGCAGATTCCGGTGGCGATGCCGGTGACTGACTACGATATTGTGATTGACGCGCTGCCGTCGGGGACGAT CAGCGACCTCCATGAGATCGCGAAGCGTATGGTGGCCGGAGGGTTTGGGAAGGAGTGCTCGCATGTGTACAGCAGTTGCC GGAGGGAGTTTTTGGAGGAGAGTCTATCGAGGTTAGGGTTACAGAAGCTGAGTATTGAAGATGTTCACAAGTTGCCATGG CAGGACCTTGAGGACGAGATTGAGCGGTGGATGAAGGCCTCCAAAGTCGCTCTCATGATACTGTTCCCCAGCGAGCGGAG GCTCTGTGACCGCGTTTTCTTCGGATTCTCCTCCGCCGCTGACCTTTCATTCATGGAGGTTTGCCGGGGCACCGCCATCC AGCTGCTGAACTTTGCTGATGCTGTTGCCATTGGAACCCGATCGCCGGAGCGGCTGTTTAGAGTTCTCGACGTGTATGAG ACTATGCGCGACCTGATTCCGGAGTTTGAGTCTCTGTTTTGTGATCAGTATAGTGTGTCGCTAAGGAACGAAGCGATCAC GATTTGGAAGAGATTGGGGGAAGCAATTAGGGGGGTTTTCATGGAGTTGGAGAATCTGATTCGCCGGGATCCCGCGAAGG CAGAGGTTCCTGGCGGCGGGCTTCATCCGATTACCCGTTACGTGATGAACTACCTCCGTGCCGCGTGCCGGTCACTACAG ACGCTGGAGCAGGTTTTTGAGGATTACGGGCATCCCTTGAAGGAATATCCTAGACTTGATGACAGAGTGCCTTCATCTTC CTCGATGTCAGTGCAAATGGATTGGATTATGGAGTTGTTGGAGAGTAATTTGGAAGCCAAGTCCAAGATCTACAAGGACC CTGCATTGTGCTATGTTTTCTTGATGAACAATGGTAGGTACATAGTTCAGAAGACTAGAGACAGTGAATTGGGAACCCTT TTGGGCGATGATTGGATTCGGAAACACACTGCAAAAGTAAGGCAATACCATGTGCTGTATCAAAGAAGCTCATGGAATAA GGTGTTGGGGTTTCTGAAGATGGACACTGGATCAATGCCATCTGGTGGGGTGGCCAAGTCAATGAAAGAGAAGCTCAGAT CGTTTAACATCCTCTTTGAAGATATATGCAGGGTTCAGTCTTCATGGTTTGTCTTTGATGAACAGCTTAGGGAAGAAATA AGAATTTCCCTTGAGAAAATCTTGTTGCCTGCATATGGGAATTTCATTGGGAGGTTTCAGAATGTTCCAGAACTTGGTAA GCATGCTGATAAATACATTAAGTATGGAATGGAGGATATTGAAGCAATGCTCAATGATTTGTTCCAGGGTAGCAGGGGAT CAACTGGTAGCCGAAAGTGAAGGTAAAGTTGCTAGTATTTGTGTGTATGTATGTTGTAGTGTAATTCCAAGGCGAAGTTT TGATTATCACAAAGGTAGTTGTAAAAGATTTGTGACCTTGTACTATAAATACACTGTAAATTATTCTGCTCAGCTTCTGA ATTAAGAGTTATCTGAGTCACTCAATGTAACATTTTTGTTGTAAACTTGTAATGTTGAGGTGGTTCTAATTGGCCTTTGC TTTCAAATCTTCAATGTGCAGTTTAATGGATCAACTGATTTAGTATGTTTGAATGTTTGATCATTTATGTAAGTTTTTAT TTCTTTTGTGTTCGTGTTTAATGTTTTACATTTGCTTGGTTCAGGTTAAGGACATGTTTTGTTAGTGGGAAACGATTAGA GTTTCTGAAGTGCTTTCTGTTAGTTCATAGGAGATTCATTTTGTATTTTTTTTTGGGTTTGACAAGACTGGATCATTTAT GGAATTTGATTGGAGCTAGACAATATATGCTTTTTGTCTTATGCTTTTGTTTTAACTTTTAATCATAACCCAAGAGAGGT CCAATGGGAAAAACCCAAGTGAGACAGATTAGTCAATTGATTAATTCAATTAGTGGTTCTCTAGTGTGCCCTTTATGTTA AGAAGATCTCAGAACTGGGCCCTCCTTCCCGCCTCTTGATCTCCTTCCTGTTTGTTCATTTCTTATTAAAATAGTTGGGG ACTTGCATACTTTGCTGTGAAAGCTCAAGAAAAGTGCCTGCGATTTTACCTTGTAGACACAAATTTTCTCACTGGTTTTC TCTCTTTAATACTTCTACCAACTTCCAGATTTAGAAAGAAAGACGTTTGTTTAAAATTGTGGCATAATTTTTATAAGAGC TTCAGTTGCAACTCAGAATGCTCTCTTTCTGCCTGCTGCAAGTTTACCCCTGAAAAAAATCTCTCCTTGGTCAGAAACCC CGTCTCTCTCTTTAGCAGTAGGTTCTTTTTCCTTTTGAGTAGCCTCTTCATTAGGATTTAGGAGTAGAAAGTACACACTC ACGTCCATATGACACAGCTGCCCCTTGCTCTAGCGATTGGTCTAACACTACTACTGTAGGAGTACGCCCTGTTTCTTCAA TTTCAACCATGGAAATACCTTAATTAGTAACAGCTTGTGAATCATAAGTTTTATGGGATTCTTTGTACGTTCTCTTATCC ACCTTCTCACATGTACCTTTACCTAAGATATCATTAGTCTCAGTTCCGGATATTGAAAGTTTAATTTGTTTCGGAGAAAT AGATTCCAACATGCTCCCTTCAGTTTCAGCATGCGTGCATGTGTGCATGTTTGCAACTTGCACATATTTCTTCAGTTCTT CAATCTGACACTTTAATCGCCTTATCAATCCTCCTGATTTGGAATTATTTCTATGATTCCCCCCTCCTGCCGAGGAGTTC TTGCAGGTTCATAACTTGGTATTCTAAGAACCTCTTGATTTCCA
CDS sequence (LotjaGi1g1v0112700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAATGTCTGAAAACGGTGAAGAGAAATTACTCGCTATGGCGCGGCACATAGCAAAGACACTAGGCCATAACACCAA CATGGCTGATGATATCCTTCAAATCTTCTCAAACTTCGATGGAAGATTCTCGAAGGAGAATCTCTCTGAGAAGGGTGTAG AATCAGACCCGAGATCCTGCGCAGTACTGGATCATTCCCTCAAAACGCTAGATCGCCGGATCTCTCACTTCGTCTCCTCC GACCGCCCTATATGGGCTGACTCCGCCGACGCCGCCGCCTTCCTCGACGTCGTCGACGACCTCAACGCCGCTGTCGCCGA GTGGAGCCACCTTGCCGCTGATAAATCCGTCGCCGCGTGTTTAGTACGCGCCGAGGACATGCTCCAGCACGCCATGTTCC GCCTCGAGGATGAGTTCCGATCTCTCATGGAGCGCGGCGGGGAGGCCTTCGACCTCACTCGGCCGTACCGGAACGGCGAG GTAAGGGAGAATGAGAATCAACCGTTTGACTCTGAGGAGGAGGAGGAAGAGGTGGAGGACGTTGAAGGAATCGACGACGG AGGAGAAGGGAATCAGCAGATTCCGGTGGCGATGCCGGTGACTGACTACGATATTGTGATTGACGCGCTGCCGTCGGGGA CGATCAGCGACCTCCATGAGATCGCGAAGCGTATGGTGGCCGGAGGGTTTGGGAAGGAGTGCTCGCATGTGTACAGCAGT TGCCGGAGGGAGTTTTTGGAGGAGAGTCTATCGAGGTTAGGGTTACAGAAGCTGAGTATTGAAGATGTTCACAAGTTGCC ATGGCAGGACCTTGAGGACGAGATTGAGCGGTGGATGAAGGCCTCCAAAGTCGCTCTCATGATACTGTTCCCCAGCGAGC GGAGGCTCTGTGACCGCGTTTTCTTCGGATTCTCCTCCGCCGCTGACCTTTCATTCATGGAGGTTTGCCGGGGCACCGCC ATCCAGCTGCTGAACTTTGCTGATGCTGTTGCCATTGGAACCCGATCGCCGGAGCGGCTGTTTAGAGTTCTCGACGTGTA TGAGACTATGCGCGACCTGATTCCGGAGTTTGAGTCTCTGTTTTGTGATCAGTATAGTGTGTCGCTAAGGAACGAAGCGA TCACGATTTGGAAGAGATTGGGGGAAGCAATTAGGGGGGTTTTCATGGAGTTGGAGAATCTGATTCGCCGGGATCCCGCG AAGGCAGAGGTTCCTGGCGGCGGGCTTCATCCGATTACCCGTTACGTGATGAACTACCTCCGTGCCGCGTGCCGGTCACT ACAGACGCTGGAGCAGGTTTTTGAGGATTACGGGCATCCCTTGAAGGAATATCCTAGACTTGATGACAGAGTGCCTTCAT CTTCCTCGATGTCAGTGCAAATGGATTGGATTATGGAGTTGTTGGAGAGTAATTTGGAAGCCAAGTCCAAGATCTACAAG GACCCTGCATTGTGCTATGTTTTCTTGATGAACAATGGTAGGTACATAGTTCAGAAGACTAGAGACAGTGAATTGGGAAC CCTTTTGGGCGATGATTGGATTCGGAAACACACTGCAAAAGTAAGGCAATACCATGTGCTGTATCAAAGAAGCTCATGGA ATAAGGTGTTGGGGTTTCTGAAGATGGACACTGGATCAATGCCATCTGGTGGGGTGGCCAAGTCAATGAAAGAGAAGCTC AGATCGTTTAACATCCTCTTTGAAGATATATGCAGGGTTCAGTCTTCATGGTTTGTCTTTGATGAACAGCTTAGGGAAGA AATAAGAATTTCCCTTGAGAAAATCTTGTTGCCTGCATATGGGAATTTCATTGGGAGGTTTCAGAATGTTCCAGAACTTG GTAAGCATGCTGATAAATACATTAAGTATGGAATGGAGGATATTGAAGCAATGCTCAATGATTTGTTCCAGGGTAGCAGG GGATCAACTGGTAGCCGAAAGTGA
Protein sequence (LotjaGi1g1v0112700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKMSENGEEKLLAMARHIAKTLGHNTNMADDILQIFSNFDGRFSKENLSEKGVESDPRSCAVLDHSLKTLDRRISHFVSS DRPIWADSADAAAFLDVVDDLNAAVAEWSHLAADKSVAACLVRAEDMLQHAMFRLEDEFRSLMERGGEAFDLTRPYRNGE VRENENQPFDSEEEEEEVEDVEGIDDGGEGNQQIPVAMPVTDYDIVIDALPSGTISDLHEIAKRMVAGGFGKECSHVYSS CRREFLEESLSRLGLQKLSIEDVHKLPWQDLEDEIERWMKASKVALMILFPSERRLCDRVFFGFSSAADLSFMEVCRGTA IQLLNFADAVAIGTRSPERLFRVLDVYETMRDLIPEFESLFCDQYSVSLRNEAITIWKRLGEAIRGVFMELENLIRRDPA KAEVPGGGLHPITRYVMNYLRAACRSLQTLEQVFEDYGHPLKEYPRLDDRVPSSSSMSVQMDWIMELLESNLEAKSKIYK DPALCYVFLMNNGRYIVQKTRDSELGTLLGDDWIRKHTAKVRQYHVLYQRSSWNKVLGFLKMDTGSMPSGGVAKSMKEKL RSFNILFEDICRVQSSWFVFDEQLREEIRISLEKILLPAYGNFIGRFQNVPELGKHADKYIKYGMEDIEAMLNDLFQGSR GSTGSRK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 636 | 625 | 2.8E-239 | – | |
| PANTHER | 12 | 636 | 625 | 2.8E-239 | ||
| Gene3D | 85 | 646 | 562 | 2.3E-180 | – | |
| SUPERFAMILY | 85 | 636 | 552 | 9.42E-150 | ||
| Pfam | 276 | 634 | 359 | 6.7E-115 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Exocyst | A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals. | ||
| Biological process | Exocytosis | A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell. |
Expression pattern of LotjaGi1g1v0112700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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