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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0118200 |
| Transcript ID | LotjaGi1g1v0118200.3 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Asparagine synthetase; TAIR: AT3G47340.3 glutamine-dependent asparagine synthase 1; Swiss-Prot: sp|P49092|ASNS1_LOTJA Asparagine synthetase [glutamine]-hydrolyzing] 1; TrEMBL-Plants: tr|Q8RVL0|Q8RVL0_9FABA Asparagine synthetase; Found in the gene: LotjaGi1g1v0118200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:18678780..18683123) extracted from Lotus japonicus Gifu genome v1.2.
ATGTGTGGTATACTTGCTGTACTTGGCTGTTCTGATTTCACTCAAGCCAAAAGGGTCCGCGTCCTAGAGCTTTCTCGCAG GCAATGATTCTAGTCTTTCTGCATATTAATTTTAACACATAAGAAACATAGTATGAATAACGTATACTAACTGTGATTAA TTAGTAGTAAAAACATAGTTCACCGTTGAGTAGTTTTTAACATGATGAATCATAGTGTCGTTGTCTTTTTTACACCAATC ATAGTTTACTATTTAACTGGTAAATCATGATTAAGGAATCAAATTCAGAAGTATAATTTTCATATTTTTTTATATATATG TGTTTTGAATAAATGTTTTCAATTTTCACTTCTTAACTATATAGTATGTTTATATACTTTGCCTAATCCAAGCTTTATGT GTGTTTGGTTAACAAGTTCATGAAAGAATTGATGATGATCATATGTGAATCAGCATGAGCATAGTTTGGCAGGGTCTTGT TTTCGTGATATTGAGAGTCAGGTGACAAGGAAGAATAAAAATGGGACCCAAGTGACATAATTCATGTTTCTCATGTCAGC TATCATGGTCTTATCCATTTCTCAAATAATTGAAAGGGAATGAATATTTTTTTTTTAACCATAGTGGAGTTCAAATCATA ATTGGACTTTTCACTGGCATCAGAATTATCACACTGGGCTTTAATAAGATAAGTAAGCAACTATGAATAAAATATATTCT GATCACACCGATGAATAATATTACAAGACAAAGAGTGGGATGTGGGGTCCAGGTTGAAATACAATTATTGGTAATAATCA GTTGAAAAATAATTAATTAAAATGGTTGATTGATGGTATAACTACTGAGAGTTAATTTTTTATTACACGATGATGTGATA AAAAAAAAGTCTATGAATATTATCATAGTCTATGTTCAATTTAATTTAATTTTTTTTCTTGGTTTGTGGTTGTTGACATG ACAGATTGAAGCACCGTGGGCCAGATTGGAGTGGACTCCACCAACATGGTGACTGCTATTTGGCACACCAACGGTTAGCC ATAGTTGATCCTGCTTCTGGAGATCAACCTCTTTTTAATGAAGACAAATCTATTATCGTCACGGTAGGCCATAAACTCAA CATCAATTATAATCATAATAGCTTTCTATATCATCCTACTTTTTACTACTAATTTCATAATGTTATTGCCTACTCTAAAT AAGCTATATTGCAATCTGTCTCATACCACCATAACTTGTTGTTTGGCTTAAAGCAGAGGTTTTTTAATCTCCTTTTCAAG TTATTACTTATATTACTAAATGCATGTTTAGAAATCCTTTAACGACCGATTCAAAATATAGAATCAATTTTGAGAAAAAA TATAGGTTTCAAAATAGATTCTGACAAGCTGATCCAAACATACTATGGCCCAGTTTGGAATAGCTTATTTGAGCTTATCT GACAGCATAAGCTCTTATGCCAGTGTTTGGGAGAGCTTATGCAAACAGCTTATGGTCTGCCATAAGCTATTTTCAGCTTA TTTTCATAAGCTACTCATGATAGCTTATGAAAAACAGCTTATGCTTATACACAGCTTATTTTTAATTTATTTCAATAAAT TTTTAAAAATAGCTTATGAATAAGCGCTTATGTCATAAGCGCTTATGACCATAAGCGCTTAATTAAGCTGTTTATCCAAA CGGGGCCTATAATTAAGTGCATGTTTAGGAACGTAGTAGATTTTCACGTTTGAGGAACAAGTGATTTTGGTAGATGCTAG GAAGAAGTCATTTTGGGATGATTAAATGTGAATCTAGACATGCTATTGTTTAATTATGGTAAATTATGATTGATGATATG TAACATTGATTAAAAAACAGGTAAATGGAGAGATTTACAACCATGAAGAGCTCAGGAAGCAGCTGCCTAATCACCAGTTC AGAACTGGAAGTGACTGTGATGTTATTGCACACCTGGTTAGTAATATTTGGAATATTCATAAATGATCAATATTGTTTTG TTTAAATTTAGCTATTTATTTGTGTTGCAGGTTCAAAGTTTTTTTTTTAATGAAATTATTCTGTCACTTGATATTTATTC ACATCTGAGTCTCTTGATCATACAATCATATAAGTTTCAACATCAACACTTCTAACATTTCACGTTTTTGTTTTTATCAA ATATATATGCTGCACACACGCGATCTTTAGATGAGTGGTCAGAATTGATTTTATTTAAGCATTTGTTAAGACACCGCAAA AAAGTGTCTGACGCCTAAAGTATAGGTGTTGTACGGGTGTCAATATCTGATACTGGATGTCAGTATCTCTGACACTAGAT CACTCCTTTGAAGAGGAGTGTGCGTGCAATAGTCAATAGAGGGTGCTAATCATGATTGAGCTGGTGATTTATTTGAACTA CTTGTTAGTTGTTACTGATGCTAATCTTTTGAATAGTATGAGGAACATGGAGAAAACTTTATGGACATGCTGGATGGGAT CTTTTCATTTGTTCTACTGGACACTCGGGACAACACTTTCATAGTGGCCCGGGATGCTATAGGAGTCACTTCCCTGTACA TTGGTTGGGGATTAGATGGTAATGTTCCTGCTATTGAATTGGATTTATGTGATTTTAGTTTGTGCACTTGAACATGTTTG AATTTGAATGAAGTGTGATGAGTTTGGCACCTTTTTGGATTCAGGGTCTGTTTGGATTTCATCAGAAATGAAAGGCTTGA ATGATGATTGTGAACATTTTGAGGTCTTTCCACCTGGTCACTTGTACTCCAGCAGAGAAAGAGCATTTCGCAGATGGTAC AACCCTACTTGGTTCTCTGAGTCTATTCCTTCAGCTCCTTATGATCCTCTAGCTGTGAGACACGCCTTTGAGAAGGTATG AATCACAAGGGTCTAAGTACATGCGTGTTTTGATCAGCGTTATCAGAACTTATTATCGATAGAATTGACTTGAGTAAAAT TGATTATGATAAAAGTGAGTTCAGAGTGAACTGATTTATGTTTTGGATAAGTTTATGAGAAAAATGATATATTGTAGAAT CCAGCAATAAAATCTCACAATCGATTATGTAAATAACAGAAGCTATGATTCATAGCTTCACCCCATAATTGGTTTCGAAG CTAGAATTAATTGTGAAAGGAAACATCATCAATTCTATTACTTGCATACATAGAAATAGTACTGACATTCAATGTGATTA CAGGCAGTGATAAAAAGGTTGATGACTGATGTGCCTTTTGGAGTGCTGCTATCTGGAGGTTTGGACTCATCATTGGTTGC TTCCATCACTTCTCGCTACTTGGCAACCACAAAAGCTGCTGAACAATGGGGATCAAAATTGCACTCATTCTGTGTAGGCC TTGAGGTATATATATATATATATCTATTCAAAACTAAGAATGACATTAAATTTTTTGGTGTTTTTATCATTTCTTAAAGA AAACCTTTAATTTTGTTTTAACATTTGTTCATCTCTTGTTGATTAGGGTTCACCTGATCTGAAGGCTGCAAAAGAAGTTG CAGACTATCTTGGAACTGTCCACCATGAGTTTACCTTTACTGTTCAGGTCAGCTTCTTTTTCATCAGAATCAATTCCGAA ACTTCAGGATTTCATTTTGGCTTCAGAATCAATTGTAGAAGAGTTTTCAAACATGCATTGAAATATTACTTTTCCTTTCT CAATTTGAGAGAGGAAATTGTACTTTCCCACTTTCAATTTGTGGCCGTTCAATATAGTAAATCATTTATATATGTTTGCA GGATGGAATAGATGCAATTGAGGAAGTTATATACCATGTTGAAACATATGATGTGACTACAATTAGAGCTAGCACACCCA TGTTTCTCATGTCTAGAAAGATTAAATCACTTGGTGTCAAATGGGTAATTTCTGGAGAAGGATCTGATGAGATTTTTGGT GGGTACTTGTACTTCCATAAGGCACCTAACAAGGAAGAGTTTCACACAGAAACATGCCGCAAGGTAATAGATTTTTCATG CTATTTGTTTGAACAAAATATAAGGTGTTCGAATGCAATTGTTAATTGAAATGTTTTGTTAATGCAGATCAAAGCACTCC ACCAATATGATTGCTTGCGAGCTAATAAATCAACATTTGCTTGGGGTCTAGAAGCCAGAGTGCCATTTTTGGACAAGGAA TTTATCAATGTCGCAATGAATATTGATCCCGAGTATAAGATGGTATGAGTAAAAATTGTGACATGGTTGCTTCATCAGTT AAAAAATTCAGACAAAATCTAGAGAAATTTTTATTGAACTGGTTTGCTATTTTAATATGTTCAGATTAAACGAGACGAAG GACGCATTGAGAAGTATATTCTGA
CDS sequence (LotjaGi1g1v0118200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTGGTATACTTGCTGTACTTGGCTGTTCTGATTTCACTCAAGCCAAAAGGGTCCGCGTCCTAGAGCTTTCTCGCAG ATTGAAGCACCGTGGGCCAGATTGGAGTGGACTCCACCAACATGGTGACTGCTATTTGGCACACCAACGGTTAGCCATAG TTGATCCTGCTTCTGGAGATCAACCTCTTTTTAATGAAGACAAATCTATTATCGTCACGGTAAATGGAGAGATTTACAAC CATGAAGAGCTCAGGAAGCAGCTGCCTAATCACCAGTTCAGAACTGGAAGTGACTGTGATGTTATTGCACACCTGTATGA GGAACATGGAGAAAACTTTATGGACATGCTGGATGGGATCTTTTCATTTGTTCTACTGGACACTCGGGACAACACTTTCA TAGTGGCCCGGGATGCTATAGGAGTCACTTCCCTGTACATTGGTTGGGGATTAGATGGGTCTGTTTGGATTTCATCAGAA ATGAAAGGCTTGAATGATGATTGTGAACATTTTGAGGTCTTTCCACCTGGTCACTTGTACTCCAGCAGAGAAAGAGCATT TCGCAGATGGTACAACCCTACTTGGTTCTCTGAGTCTATTCCTTCAGCTCCTTATGATCCTCTAGCTGTGAGACACGCCT TTGAGAAGGCAGTGATAAAAAGGTTGATGACTGATGTGCCTTTTGGAGTGCTGCTATCTGGAGGTTTGGACTCATCATTG GTTGCTTCCATCACTTCTCGCTACTTGGCAACCACAAAAGCTGCTGAACAATGGGGATCAAAATTGCACTCATTCTGTGT AGGCCTTGAGGGTTCACCTGATCTGAAGGCTGCAAAAGAAGTTGCAGACTATCTTGGAACTGTCCACCATGAGTTTACCT TTACTGTTCAGGATGGAATAGATGCAATTGAGGAAGTTATATACCATGTTGAAACATATGATGTGACTACAATTAGAGCT AGCACACCCATGTTTCTCATGTCTAGAAAGATTAAATCACTTGGTGTCAAATGGGTAATTTCTGGAGAAGGATCTGATGA GATTTTTGGTGGGTACTTGTACTTCCATAAGGCACCTAACAAGGAAGAGTTTCACACAGAAACATGCCGCAAGATCAAAG CACTCCACCAATATGATTGCTTGCGAGCTAATAAATCAACATTTGCTTGGGGTCTAGAAGCCAGAGTGCCATTTTTGGAC AAGGAATTTATCAATGTCGCAATGAATATTGATCCCGAGTATAAGATGGTATGA
Protein sequence (LotjaGi1g1v0118200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCGILAVLGCSDFTQAKRVRVLELSRRLKHRGPDWSGLHQHGDCYLAHQRLAIVDPASGDQPLFNEDKSIIVTVNGEIYN HEELRKQLPNHQFRTGSDCDVIAHLYEEHGENFMDMLDGIFSFVLLDTRDNTFIVARDAIGVTSLYIGWGLDGSVWISSE MKGLNDDCEHFEVFPPGHLYSSRERAFRRWYNPTWFSESIPSAPYDPLAVRHAFEKAVIKRLMTDVPFGVLLSGGLDSSL VASITSRYLATTKAAEQWGSKLHSFCVGLEGSPDLKAAKEVADYLGTVHHEFTFTVQDGIDAIEEVIYHVETYDVTTIRA STPMFLMSRKIKSLGVKWVISGEGSDEIFGGYLYFHKAPNKEEFHTETCRKIKALHQYDCLRANKSTFAWGLEARVPFLD KEFINVAMNIDPEYKMV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 417 | 417 | 4.5E-292 | – | |
| SUPERFAMILY | 1 | 195 | 195 | 7.12E-54 | ||
| PANTHER | 1 | 417 | 417 | 4.5E-292 | – | |
| Phobius | 1 | 16 | 16 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| ProSiteProfiles | 2 | 185 | 184 | 34.736 | ||
| TIGRFAM | 2 | 369 | 368 | 6.8E-104 | ||
| CDD | 2 | 192 | 191 | 3.18397E-74 | ||
| Phobius | 2 | 10 | 9 | - | – | |
| Gene3D | 3 | 192 | 190 | 3.0E-61 | ||
| Phobius | 11 | 16 | 6 | - | – | |
| Phobius | 17 | 417 | 401 | - | – | |
| Pfam | 48 | 165 | 118 | 6.0E-39 | ||
| Gene3D | 195 | 417 | 223 | 2.6E-77 | ||
| SUPERFAMILY | 200 | 416 | 217 | 1.96E-60 | – | |
| Pfam | 210 | 361 | 152 | 1.6E-56 | ||
| CDD | 211 | 416 | 206 | 1.66951E-65 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Asparagine synthase (glutamine-hydrolyzing) activity | Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate. | ||
| Biological process | Asparagine biosynthetic process | The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid. |
Expression pattern of LotjaGi1g1v0118200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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