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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0126900 |
| Transcript ID | LotjaGi1g1v0126900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NAC domain-containing protein; TAIR: AT4G35580.1 NAC transcription factor-like 9; Swiss-Prot: sp|F4JN35|NTL9_ARATH Protein NTM1-like 9; TrEMBL-Plants: tr|A0A0R4J5A6|A0A0R4J5A6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0126900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:20276584..20280819) extracted from Lotus japonicus Gifu genome v1.2.
GTAAAAAATCACAGTCTTCTTCTTCTAAATTCATTGATTTATTTATTATTTCCAAGTAACTTTCTCAGCAAGTTCCTTAA CCTTTACCTGTTCATCAATCACAAAACAGCAAACAAAAACCCTCAAAATCCTTCGAATCTCTCACTCCGATTCTCAATTC AATTTCCACCTTATAAATCTCCTCTCACCAACACTCCCTCCTCTTTTTCTCTCTCTCTGCTTCTCTTCCCTTTTCTCTTC CTCTTCCTCTTTCTATCTTCCCTCAAACCTCTGTGTTTCTGTGTTTGCATAATGGGTGCCGTCGATTTTTGTCCGCCGCC GCGTAAAGTGGAGGAGGTGGCGGTTCTGTCACTCAACAAACTCCCTTTAGGCTTCCGATTCCGCCCCACCGACGAGGAGC TCATCGATTACTACCTTCGCTCTAAGATCAACGGACATGGCGATGATGTTTGGGTTATCCGTGAAATCGATGTCTGCAAA TGGGAGCCTTGGGATTTGCCTGGTAATTTACCTCCACCTTCTTTCTCTTGTCGTAAATTCATCTGGGTTTTCTCAAAAAT TGGGAAAGTTTTGATCTTTTTGCTCTGCTGATTTTAGTAACTTTAACTCACAAAACACTGTTTTTTTTTTTTTTTGCAAT TTTGTGCTTGTGGATTGTAGTTATTAATTTTGTGCCTGTTAATTTTCCCTGATTTTGATTTGGGTTGTCTTATGAATTGG GAAAGTTCTGATTTTTTTACTCTGCTAGTTTTAGTAATTTTCCTTACAAAACACTGTTTTTGCAATTTTGTGAATGGGAA AAACGAGTTTTGGGAGACTTGAGCTTTGCCTGTTAATTTTCCCTGATTTCTCTGATCATATTTTGATTTGGGTTGTCTCC AGAATTGGGAAAGTTCTGGTCTTTATGTTCTTCTGAAAGTAATCAATTGAAGTTATTACTAATTAAAGATCAACCCTTAA AATTGTGATCTGTGTACATGAGTTAGATAATTTATAGAGCTGTTTAAATATCAGTTGTTAATTTTTACTAATCAATGACT ATAATTGCTTACTCTCTCACTTAACACACTTCAATGGAGCTTGTTGAATGAGTTCTCTCTTACTAGTATTTATTTTTGAT ATGTTGCTGTGCTACTTGATTTGACGATTTTGTTCTTGATTGAACATGTGGGGTTTTTGTTGCAGATTTGTCAGTGGTGC GGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCGCAGGACCGTAAGTACCCAAATGGGCACCGGTTGAACAGGGCGACG AGCCATGGATATTGGAAGGCAACGGGCAAGGATCGCAAGATTAAGTCTGGCTCCACCTTGATTGGGATGAAGAAGACTCT AGTTTTCTATGCTGGTCGTGCTCCCAAGGGGAAGAGGACCCATTGGGTTATGCACGAGTACAGGCCTACCCTGAAGGAGC TTGATGGCACCAACCCAGGACAGGTATAGTCTTGTCTCCTGTTTCCATTGTTTTATATTTGCTTTTTATCATTGTTTCTA TGGTTTTTTACATTGAATCATTGCAATGTGTGATAACTTTATAATTTTCTTTTACGCTGAAGTAGGAAACGTGGTGAGCT GTTTTGCATTTGTACCTCCATGTTTTATGAATGGTGATGTGAGTTTGTTCTTCCTGTTCTGTTTGCAAGTGTGGTTGAGT GATCTTTTCACATATTTGTGACAATTTAACAAAGCAAAGTTGACTCACCAGCTATTAGATATTTCTAGTTTTCTTTCTAG TCTTATTTTCCTCCCACGTTCGAATTTGAAGGTTGCAATTATCTTGTTTGCACTACTTGGTACAGCAGATAATTTGCAGT TTCGAATTTGATACTTCTCATTTCTCAAGGTTTTAATGTTTATCAAAAGTTCTTGTTTGCTGAGTTTGAGTCAACTATTG TATCTATATCTCTTTGAATTGATTATCTATGTATTTACTTTGATTCTAATTATATGATGATACGATATATTGCTAACTTT TCTGTTTGGTTGATTTGACTTATACCAGAATCCATATGTCCTTTGTCGGTTATTTAAGAAAAACGATGAGAGTCTTGAAG GTTCAAATGAGGAAGTAGAGCAGATTGCTTCAACTCCTACAACTGCAAGTTTCTCTCCAGAAGAAATACAATCTGATCCA TCGCTGGTTCCTGTATCTTCCTCACTGGCCACAGAAGATGATAAGCACCTACCAGTTATCCCTGAGCAGTCTGAGGAAGC AATATCCAACATTATAAATCCAGTTGATTGCCATAGTGATGGAGGTGATGCTCATGATGCAAAAATTCAAATTATAGAAC CACCTGCACAGGTTAGATTGACTGAGTTTTAATCAAATGTTTATTCCTTTCTTTTTCTTGTTTTCATTCCTCCTTAATTG ATTTGTTGATTTAGTAACCATACTTTATCTTTGCTATTTCAGGAGGATCAGCCATTGAACTTTGACATATTTTATGATCC AAATCCAACATTTCAGCAATTGGATGACAAACTGTTCTCCCCAGTCCATGCGCATTTTCCACAAGAATTTTATTACCAAG CTAACAATCAATCAGACCTTCAATATGGGACAAATGAGACAAATATTCCAGACTTTTTTAACTCTGTTAATTGGGATGAG TTTTCTCATGAAGACTCAACCTTGTTTAATCTTAAGGACAATGGATCATGCAGTGACTCAGATGTGGAAATGGCCAATTT GACGGTTAGTATCATTCTAGGTTTCTGCCACCACCAGAATGACATTTGTTAGTTTTGAAACACCTAGTGGCAGCCCTAAC CCCTTTCTAAATTACACATCAAATCGCTACTTGAGTTATATCTGTGTATAGATGAGTTTTCTTAGCTTGGTTTGCTTGTG CCACTTATATAATGTTACTCTTTTTGTATGCTGTAGCTTCTGCAAGCAATAGATGCTGCTTATCCTATGGAGGCAATTGA GCAAAGGAGCAATGCAGGATTATTTCAGAACAATCCCCAGATGGCTTTCTCAACTAATGTTGGTTTGGACCAAGTGACCT GTGCAGTCAATTATAATGAGCAATCAAGAAGCTTTGATACGGTTGTTCATGGTGATACGGGAATCCGGATAAGGACTCGA CAAGGACGAAATGATCAGCCAGACATGAACCCTACCCTACCATCACAAGGTATTGCACCGAGAAGAATACGACTGGGAAG ACTTGTTATGCATTCGCATGGTTCCGATGAGACGGCTAAAGATGGGAGTGGTGCACCACCACAAGACCATAATTCAAAAA CCATCATTGCTGGGGTGAGAATTTTGTTTATATAACTTGCGTGTCTAAATAAGATATGTCACTGCATGTTGTGATATTTA TGTGTTCCTCTTTTGCAGGAGAAGGAAGCTTCAGAAAACCATGCTGCTGATGAGAGTGCTGCCGTGGATGAACCGGAGAA AACATCTTCTGAGTCAGCTGACTCAAGAAAAATCTGTCAGCAGCCAATTGCAAAACCCATATTGGGGTGGAAAGACTTGC TATTGGGCAGAAGGGTCCGTTACACATCAAAGGTTTCGTCCAATCGCGCCATGTGGTCTTCTGTTCTTGCAGTTTCTGCC TTTATACTGGTTTCAGTTGTGTTGCTTGTTAGTGTTTGGGGATATCTTAGATTTTATACTGCTTACTAGAGATCATTCCT TTGTTCAGAATTTGCCTCCATTGCTTTTTTGGGGACAGTTAAGGAGGCATGTGTAGGGTTGAGTTTCTTAGATTTGTTGA TAAGAACATACATTATCAATATATATGTAATATATGTGTATCATGTAGTGGTTGTAGAATATGGTAGTGGACTGTAGACT CTTGTTGCCGCATTTAGATTCCTAGTTTCATGGCTTCCATTTTCGTTTTGTTGTTAGATGTTGGCTGTCCACTTTACCAC CATTCTTTTGTTCTGTTATTGCTTTGCTCCCATTTTTCTTGGTAACATAGCCTGGAAAACAACAACTAAGCACCCGGCTA AAACGACGATGAGTACTAATCATCACCTACATTAATGCTAAGAAACCGATGCTAAGAAACCGATGACATCCACCAAAACC CGACTCCTCCCATGTTTAACAACTCCTTGTACGCCGTACCCTTTACTTAACTTTCACATTTTTGGTGTGTTTACGAACAT GTTCCAAGCCGAGAAAACATCAGTTTTTCTAACGTAAGAAGGAATGTGAGTGTAATGAAAGAAATGTGGTTGCTAA
CDS sequence (LotjaGi1g1v0126900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGCCGTCGATTTTTGTCCGCCGCCGCGTAAAGTGGAGGAGGTGGCGGTTCTGTCACTCAACAAACTCCCTTTAGG CTTCCGATTCCGCCCCACCGACGAGGAGCTCATCGATTACTACCTTCGCTCTAAGATCAACGGACATGGCGATGATGTTT GGGTTATCCGTGAAATCGATGTCTGCAAATGGGAGCCTTGGGATTTGCCTGATTTGTCAGTGGTGCGGAACAAGGATCCA GAGTGGTTCTTCTTCTGTCCGCAGGACCGTAAGTACCCAAATGGGCACCGGTTGAACAGGGCGACGAGCCATGGATATTG GAAGGCAACGGGCAAGGATCGCAAGATTAAGTCTGGCTCCACCTTGATTGGGATGAAGAAGACTCTAGTTTTCTATGCTG GTCGTGCTCCCAAGGGGAAGAGGACCCATTGGGTTATGCACGAGTACAGGCCTACCCTGAAGGAGCTTGATGGCACCAAC CCAGGACAGAATCCATATGTCCTTTGTCGGTTATTTAAGAAAAACGATGAGAGTCTTGAAGGTTCAAATGAGGAAGTAGA GCAGATTGCTTCAACTCCTACAACTGCAAGTTTCTCTCCAGAAGAAATACAATCTGATCCATCGCTGGTTCCTGTATCTT CCTCACTGGCCACAGAAGATGATAAGCACCTACCAGTTATCCCTGAGCAGTCTGAGGAAGCAATATCCAACATTATAAAT CCAGTTGATTGCCATAGTGATGGAGGTGATGCTCATGATGCAAAAATTCAAATTATAGAACCACCTGCACAGGAGGATCA GCCATTGAACTTTGACATATTTTATGATCCAAATCCAACATTTCAGCAATTGGATGACAAACTGTTCTCCCCAGTCCATG CGCATTTTCCACAAGAATTTTATTACCAAGCTAACAATCAATCAGACCTTCAATATGGGACAAATGAGACAAATATTCCA GACTTTTTTAACTCTGTTAATTGGGATGAGTTTTCTCATGAAGACTCAACCTTGTTTAATCTTAAGGACAATGGATCATG CAGTGACTCAGATGTGGAAATGGCCAATTTGACGCTTCTGCAAGCAATAGATGCTGCTTATCCTATGGAGGCAATTGAGC AAAGGAGCAATGCAGGATTATTTCAGAACAATCCCCAGATGGCTTTCTCAACTAATGTTGGTTTGGACCAAGTGACCTGT GCAGTCAATTATAATGAGCAATCAAGAAGCTTTGATACGGTTGTTCATGGTGATACGGGAATCCGGATAAGGACTCGACA AGGACGAAATGATCAGCCAGACATGAACCCTACCCTACCATCACAAGGTATTGCACCGAGAAGAATACGACTGGGAAGAC TTGTTATGCATTCGCATGGTTCCGATGAGACGGCTAAAGATGGGAGTGGTGCACCACCACAAGACCATAATTCAAAAACC ATCATTGCTGGGGAGAAGGAAGCTTCAGAAAACCATGCTGCTGATGAGAGTGCTGCCGTGGATGAACCGGAGAAAACATC TTCTGAGTCAGCTGACTCAAGAAAAATCTGTCAGCAGCCAATTGCAAAACCCATATTGGGGTGGAAAGACTTGCTATTGG GCAGAAGGGTCCGTTACACATCAAAGGTTTCGTCCAATCGCGCCATGTGGTCTTCTGTTCTTGCAGTTTCTGCCTTTATA CTGGTTTCAGTTGTGTTGCTTGTTAGTGTTTGGGGATATCTTAGATTTTATACTGCTTACTAG
Protein sequence (LotjaGi1g1v0126900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGAVDFCPPPRKVEEVAVLSLNKLPLGFRFRPTDEELIDYYLRSKINGHGDDVWVIREIDVCKWEPWDLPDLSVVRNKDP EWFFFCPQDRKYPNGHRLNRATSHGYWKATGKDRKIKSGSTLIGMKKTLVFYAGRAPKGKRTHWVMHEYRPTLKELDGTN PGQNPYVLCRLFKKNDESLEGSNEEVEQIASTPTTASFSPEEIQSDPSLVPVSSSLATEDDKHLPVIPEQSEEAISNIIN PVDCHSDGGDAHDAKIQIIEPPAQEDQPLNFDIFYDPNPTFQQLDDKLFSPVHAHFPQEFYYQANNQSDLQYGTNETNIP DFFNSVNWDEFSHEDSTLFNLKDNGSCSDSDVEMANLTLLQAIDAAYPMEAIEQRSNAGLFQNNPQMAFSTNVGLDQVTC AVNYNEQSRSFDTVVHGDTGIRIRTRQGRNDQPDMNPTLPSQGIAPRRIRLGRLVMHSHGSDETAKDGSGAPPQDHNSKT IIAGEKEASENHAADESAAVDEPEKTSSESADSRKICQQPIAKPILGWKDLLLGRRVRYTSKVSSNRAMWSSVLAVSAFI LVSVVLLVSVWGYLRFYTAY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 547 | 547 | - | – | |
| SUPERFAMILY | 19 | 174 | 156 | 8.37E-61 | ||
| PANTHER | 21 | 432 | 412 | 2.2E-102 | – | |
| PANTHER | 21 | 432 | 412 | 2.2E-102 | – | |
| ProSiteProfiles | 24 | 174 | 151 | 55.966 | ||
| Pfam | 25 | 150 | 126 | 1.3E-35 | ||
| Gene3D | 33 | 178 | 146 | 4.8E-55 | ||
| MobiDBLite | 180 | 209 | 30 | - | – | |
| MobiDBLite | 184 | 209 | 26 | - | – | |
| MobiDBLite | 423 | 446 | 24 | - | – | |
| MobiDBLite | 459 | 478 | 20 | - | – | |
| MobiDBLite | 489 | 511 | 23 | - | – | |
| MobiDBLite | 489 | 514 | 26 | - | – | |
| Phobius | 548 | 574 | 27 | - | – | |
| TMHMM | 552 | 574 | 23 | - | – | |
| Phobius | 575 | 580 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi1g1v0126900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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