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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0128500 |
| Transcript ID | LotjaGi1g1v0128500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc finger with UFM1-specific peptidase domain protein; TAIR: AT5G24680.1 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2; Swiss-Prot: sp|Q3SWY8|ZUFSP_BOVIN Zinc finger with UFM1-specific peptidase domain protein; TrEMBL-Plants: tr|K7KA31|K7KA31_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0128500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:20509729..20515005) extracted from Lotus japonicus Gifu genome v1.2.
AAATCCGAAAATTAGGGGTGTGAAATCTAATGGTTGGGGTGGCAAATCCAGCTCTCACCCGATTGCTGCAGCCGCCACAA ACATTTGAAAATAAGATGGGTTTCCGCCATTAGCGTTTCAACACCACACTGTCCTCTCCGCTTCTTCTTCTTCTTCTTCA TCAATGGATTCTTCAACTTGCCCCATCTGCAATATCTCACTCCCATCCTCACAACTCCAATGGTATTTCATTCCCTCTAT CTCTCTTTCTTCGTTTCGCATTTGATACATGATGATGATAACACCGCTTCAATTGCAGGCACGCCAACACCCACTTCGAC GACGACGATAATCACGCTCCTCCGGTACCCCTTTTTCCCTTTTCATTCACACCACCATTTTTTTTTTCTTTTCCTTTCGG GTTAACTGAGATTCATAGAAAAATTTGAAAACTAAAAATTGGATTTTTTTCCCATTTTGTAAGATTCTCTTTGTGATTGG TGATGAAAGTGAATTTTATTTTTACCCTTTTGAGCATAGAATGTGATTTTGTGAACAATTTCTGCTGAACAACACCACAC ATACTAGTGAACTAAATTCCAACTATTATGTTATGGATGTGATAAATAAATGAAGATAAGAGAAAGAAGTAATAGATGCG ATTTTTATTTTGATAGAGAAATGTTAGTTGTTAGTAATTCGAACCGTGGACCCTTCACCCTTCATCCCACCCAACCCGTA TATCCCCTAGCTCTTACCACCATTTTCTCGGGGACAAGTAATAGATGTGATGTGATGTTATATATTTTTCTTTTGTCGAA ATGCAAGTTTTCCCATGTTTGGTGTAAAATGCACCACTTTTTCATCTGCTTGTCAGGAGAAGAAAGTCAAATGATGTGCT TGTTGTTGTTGTTACTCAATCTGTAGTTTGTGTTGTTTTTATTCTGCAGGTTGAACAAGCAATTAATGGCTTTCATTTTG ATACAATTTCTGGAGATCATGACAGTTGGTTTGGTGGGACTGGTAGAGGTAAAGGGGTGTGGGAAATGAATGAAAAGATC TCTTGTTTGGTTGGTTTGCAGAGATGGGGCGATTTTTACAAGGTTGGAGCAGGTTTGATGGTCTTGTTACGAAACTGTTT GGAGTCTGAAGCTGATTCAAGAAGCATTTTGTCAGGTTATGTTGATCATTTCCAGAGCAATCTGTCTGAGGATGTTGGAT GGGGTTGTGGTTGGCGTAACATCCAAATGCTTAGCTCACACTTACTAGCACAAAGGCCAGGAGCAAGAGAAGCCATGTTT GGTGGTTCAGGATTTGTTCCTGATATCCCATTTCTTCAGAGATGGCTTGAGATTGCTTGGGAAAGGGGTTTTGATGAAAC TGGCTCTCATCAATTCAATCATGCTGTTTATGGCTCTAGGAAATGGATAGGAGCTACTGAATGTGCTGCCTTATTGCGTT CTTTTGGTCTCCGAGCAAAGATAGTGGATTTTGCTCCCAAGGAATCTGAATCTCTCTTTCTATCCGTTCCTGGTTCAAGT GTCGGGGCACAGGAGCTAGTGACAATTAATGGTGGAAGGAAGAGGAAAATATCAAATGTGTATGGACCAATGGATAGATA TCTGTATCGTGATGTTTCTCAAGCAAGCTGTAGCCAGGATGCACAGTCATGTTCTTCTCTTATGCGGCTTCATGATGCTG TAGATAACAAAAGTGATGGTGATGGGGCGGTGAAAAGTACTGCTAAACAAAGTAAGGGCCATCAAGTTCTCATGGACTTC GTGTGGAATTATTTTTCTAGTAACGACTCAATTCAATTTGGCCACCAGCGTGTTGCTATCAGCCAGAAAACGTGAGTGAG GGTGCATTTTAGGCACACATGTTCTAATCTAACAAATGATTGTGTTTCTTATGGTGTTTTAAGTTTTGAAAGCTTTATTG GACAGGCCCTTATACTTTCAACACGATGGACATTCAAGAACCATAGTTGGAATCCAAGTCAAACATCAAAGGAATGGAGC AATGCAATATAATCTCCTCATTCTGGATCCTGGCCATGTAATTTATTTGCCTCTTAATTTCTGTTTTCTTGATTGCTATT TAGATGGTTGTGTCTAATTGCATGAGTGTCTCTTGTCTAACTACAAAACTTAACCAAATTTTTTTTAACTACAACCTACA TGATAATCCTTACTTTACTATAGTTTTGTCGGGTAACTGGTTGTATTCTCTGGAATGGATTAGTACAAGCTCTACAAGTA AGTATGTCTTTGGAATCCTTTTACAATTGATTTTTAAAGCCAAAATCAATCATGGGGAGAAGCTTCTGTGAGTAGCTTCT AGGTGCTAGAATTCATTATGATAAAATAAGGAGTTGATACAAATATGCTATAAGATATGCAAATAGATGTTGGTTTAGAT ATGTTATCTTCCTACTTCTCTCAGTTATGTGTATGTGTGTGGTTCTTAAAGAAGTATTCTGGAATATGCATGTTATGTAG TAATGATGGCATGACATGATTTCAAATGTTGTGACTTATCATGATAGAGAACGGCTGCTCTAGAGAGAACACTTAAGGAG AAAGTTGGATGGCAGAGATATGTAAAAAGAGGAGTGCACACTCTGAGGAGAAAACAATACCAGGTTTGCTTCTTTTAACC AAAATTTGAGAGTGTCTTGCACCATTGGATGCGGAGGCTTAATGGTCTTGTTTCTATTTCAGCTGTGTTATGTTGATCCT GGAATAGCCAATGAGAAGGAGATGGAACAACTCAAGACAATGGATAGTGTTTTCCTTGAACTTTAGACAACCATATAAAG GTCTTTGCTACATCAAGGTATCATCTTACATTTCTTGTCACATACTATTTTTCTTGGCATTTTCTCTGACTGATTTTCTC ACAATAGAGAAGAATTGGATACCAAACGGAACGTTTTATAAATTGATCCAGATAATTTTGTTATTTACAGAAGCTGGCGG CTGTATAAAAAGTAAAAACTGTTAACCATATAAGGTTTCTTCCAAGCTCAGTCTGATATCATCCCTGAAGTTAAAGTATA CATACAACATAGCAGCAGGGGAATAATCACCAGATACAATTTAGTCTTTTCTATGGACCTCAATGACTCTGCTGTGTGGG ATGGGATCATCTAATTGCACCACTAATGAGTGCTACCGTGTTTTTATTTGATTAGAATTCTAATGTGTCATGAAGCCGAG TCCAGTACTCCTTAACAAATACTCCCTCAGTTCCTATTTAACTGTCCACTTTGAGTGGAGGCACACATAAAAGGGTGTGA TTAATTTTGTTGATTTTTAGAAAAAGTGAGGGTTATTTTTCTATTTTATCCTTTAAAGTATGTGTTATCTCTCATCATTT ATTTTACTGACAAGGACATTTGTTGTAAAAACATCATTTAATGCTCTCTTGAAATGCTAAGTGGACAGTTAAATAGGAAC AAAAAAATTTCTTCAAAGTTGACAATTAAATAGGAACAGAGGGAGTATTTGTAAATAACTTTTTATAATTAAATTGAGCT ATAATTTTTAGGGTGATTCTAGGGTGGACCACCCTAACACATGAAGTATGAGGAACAAGTCACAAGCTGTCGGAACTCTA AGCTACAACGTCACTCCAAGAAAGAAAGAAAAACATCCATGTGAGTCGTAGCTCTTGAGATTCTTCCCTATCACACAAGA GCCTAAGACTTAAAGCGTGAAGAATGCACATACTCATCTATCCTTGTGTTGTAACACAATATTTTTCATTAGAATAATAG GGGTGACAATGGTTGAACTCTAGCCCACATGGTCAAAAGACTCTTATACTTCTAATGTAGGACTCAAGTCCCATACCATA CATTTGTCCATTTGTTTCTTCCTCCTCCTAAAGATCAAGTCCCATACCATACATTTGTCCATTTGTTTCTTGTAATGGAT GATAAGAACCTTGGTAGAATCGTACCACAAAAGCGTCGTTGTAGTTGGCAGCCCGAGACCTAATAAATCTCACATTAGAA TCTCATTATTCTAATGTCAGTCTCATACCTTGTTATCGTAGCATCAGTGCCTTGTAGGTTGGCTATACACTAGCCCTTTT GACTAGGGTTGGGCAAGCACTGCAAAGTCGATGTTAACACCCGCGTCACTCGTTTGCAGATGAGACATGGTGGGAGGCTC TGATACTAATTAATAAGAACATTGAAAGAACAGTACTATAAAAAGCTAGTCATTGTAGTCAGAGAGCTCAATGTCTTATA TCCTCCAAACAAACAACAATACACACCAAGCACCCATGTAATGCTAAAGGGGCAATGTGTTGGGTTCTCGACATTGATGG ACCACAGGCACAAGCAGAACAGTTGGCCCCGCAAACATGGATCTTGGTGGAATCTTGACAACAAAACCCAGTCAGACGAT CACTATAAGTCGAGGTGATCAGGGTAAGATTATCCACCCAAGTGTTAATCATTTTGAACCCTAACTTGTTTTTCCCACCG CTTGGGTCAAACTTTTGTTTCTCAAACACAGACTCTTGATCCCTTTGCCAACCATAGTCCACGATTAGAGAACTTGACGC AAGCAGTAAATTAACACCCCCAAGTCAACGACTCTGTTAGAGGAACGAACGTGTCGTTCAAAGACATGATACAATACGTA AGCTCTCTTTCACCCCTCTAAGTAAACGACGAGTCATACAAATCCAACATATCTCTTTGATCATCGTACCTTGAACCCTT CACGTAACATCAAACCTCAAACTCCCACGACTCAAAACCCTCTAACCCAACCTTATAAAAGGCAAGGTCTAAAGACCCAT GTACACATCTTCTTCACAACCTTTCACCCATGTTCTAACTTAAGCATCAAGGTATTTTTTGCAGATTCCACCAACTACAT TCAGACGATAGAGGCGTGACCTTAAATCATAGAAAACTGTCGCATTTCCATCGTTCCCTACTCAACAAAACACTATTATG AGTGATTGACCGGCATGGTCCGATCAACCATGATGTAAAACTAAATATATTTAACACTTGTTTGATTGTCTTCTTAAATT TCTAAAATTTAAAACGTATTTTTAGAAATGGTTATAAAACCTATTTTTAAAAATAAATATTTGAATGAAATGTTTTGTGA GGTTGAAAGAAAAATGGAAAATATATCTGGAATGTTTTTGGATTTTAATTTTAAAATACAAATAATAACTGTTTTTAAGA AGAAAAAAAACATTAGAAATTTATGTTAGATACCTTGAATTAGGCCAGTTGCTTGTGCTTGTCCTAGCATGTGGAGA
CDS sequence (LotjaGi1g1v0128500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTCTTCAACTTGCCCCATCTGCAATATCTCACTCCCATCCTCACAACTCCAATGGCACGCCAACACCCACTTCGA CGACGACGATAATCACGCTCCTCCGGTTGAACAAGCAATTAATGGCTTTCATTTTGATACAATTTCTGGAGATCATGACA GTTGGTTTGGTGGGACTGGTAGAGGTAAAGGGGTGTGGGAAATGAATGAAAAGATCTCTTGTTTGGTTGGTTTGCAGAGA TGGGGCGATTTTTACAAGGTTGGAGCAGGTTTGATGGTCTTGTTACGAAACTGTTTGGAGTCTGAAGCTGATTCAAGAAG CATTTTGTCAGGTTATGTTGATCATTTCCAGAGCAATCTGTCTGAGGATGTTGGATGGGGTTGTGGTTGGCGTAACATCC AAATGCTTAGCTCACACTTACTAGCACAAAGGCCAGGAGCAAGAGAAGCCATGTTTGGTGGTTCAGGATTTGTTCCTGAT ATCCCATTTCTTCAGAGATGGCTTGAGATTGCTTGGGAAAGGGGTTTTGATGAAACTGGCTCTCATCAATTCAATCATGC TGTTTATGGCTCTAGGAAATGGATAGGAGCTACTGAATGTGCTGCCTTATTGCGTTCTTTTGGTCTCCGAGCAAAGATAG TGGATTTTGCTCCCAAGGAATCTGAATCTCTCTTTCTATCCGTTCCTGGTTCAAGTGTCGGGGCACAGGAGCTAGTGACA ATTAATGGTGGAAGGAAGAGGAAAATATCAAATGTGTATGGACCAATGGATAGATATCTGTATCGTGATGTTTCTCAAGC AAGCTGTAGCCAGGATGCACAGTCATGTTCTTCTCTTATGCGGCTTCATGATGCTGTAGATAACAAAAGTGATGGTGATG GGGCGGTGAAAAGTACTGCTAAACAAAGTAAGGGCCATCAAGTTCTCATGGACTTCGTGTGGAATTATTTTTCTAGTAAC GACTCAATTCAATTTGGCCACCAGCGTGTTGCTATCAGCCAGAAAACGCCCTTATACTTTCAACACGATGGACATTCAAG AACCATAGTTGGAATCCAAGTCAAACATCAAAGGAATGGAGCAATGCAATATAATCTCCTCATTCTGGATCCTGGCCATA GAACGGCTGCTCTAGAGAGAACACTTAAGGAGAAAGTTGGATGGCAGAGATATGTAAAAAGAGGAGTGCACACTCTGAGG AGAAAACAATACCAGCTGTGTTATGTTGATCCTGGAATAGCCAATGAGAAGGAGATGGAACAACTCAAGACAATGGATAG TGTTTTCCTTGAACTTTAG
Protein sequence (LotjaGi1g1v0128500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSSTCPICNISLPSSQLQWHANTHFDDDDNHAPPVEQAINGFHFDTISGDHDSWFGGTGRGKGVWEMNEKISCLVGLQR WGDFYKVGAGLMVLLRNCLESEADSRSILSGYVDHFQSNLSEDVGWGCGWRNIQMLSSHLLAQRPGAREAMFGGSGFVPD IPFLQRWLEIAWERGFDETGSHQFNHAVYGSRKWIGATECAALLRSFGLRAKIVDFAPKESESLFLSVPGSSVGAQELVT INGGRKRKISNVYGPMDRYLYRDVSQASCSQDAQSCSSLMRLHDAVDNKSDGDGAVKSTAKQSKGHQVLMDFVWNYFSSN DSIQFGHQRVAISQKTPLYFQHDGHSRTIVGIQVKHQRNGAMQYNLLILDPGHRTAALERTLKEKVGWQRYVKRGVHTLR RKQYQLCYVDPGIANEKEMEQLKTMDSVFLEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 432 | 432 | 1.4E-230 | – | |
| PANTHER | 1 | 432 | 432 | 1.4E-230 | – | |
| Gene3D | 98 | 223 | 126 | 2.6E-8 | – | |
| Pfam | 107 | 407 | 301 | 8.7E-62 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0128500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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