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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0130000 |
| Transcript ID | LotjaGi1g1v0130000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphate transporter; TAIR: AT5G43360.1 phosphate transporter 1;3; Swiss-Prot: sp|O48639|PHT13_ARATH Probable inorganic phosphate transporter 1-3; TrEMBL-Plants: tr|K0I2D6|K0I2D6_ASTSI Phosphate transporter 1; Found in the gene: LotjaGi1g1v0130000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:20887070..20888749) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTACTAACCATGGGGTCCTCTCAGCTCTTGACTCTGCCAAGACACAAACCTACCATTTCAAGGCAATTGTGATTGC TGGCATGGGATTCTTCACTGATGCATATGATCTCTTTTGCATCACCGCGGTTACAAAGCTTATCGGTCGCCTTTACTACT ATGATCCCGCGACTCATAATCCAGGAAAGCTTCCAACAAATGTGAACAATGCCATAACAGGGGTTGCCTTGTGTGGCACG CTTGCAGGGCAACTCTTCTTTGGCTGGCTTGGTGACAAACTTGGTAGGAAAAAAGTTTATGGCATAACCCTTGTCACCAT GGTGGGTTGTGCTTTAGCATCAGGCCTCTCCTTTGGCTCATCTTCCAAAAGTGTGGTTTCTAGTCTCTGCTTCTTCCGAT TCTGGCTCGGGTTCGGCATTGGCGGAGACTACCCACTCTCAGCTGTGATCATGTCTGAATACGCCAATCAGAAAACCCGG GGTGGTTTTGTCGCGGCCGTGTTTGCTATGCAAGGAGTGGGGATACTGGTGGCTGGAGGGGTGGCCATGTTGGTCTCCTC ACTGTTCTTATCAGCATATCCTGCTGTTGATTTTGCAACTGATCCTGTGGTTTCTACTCAGCCAGAGGGAGATTTCGTTT GGAGAATTGTGCTCATGTTTGGTGCATTTCCTGCAGCCTGCACTTATTACTGGCGGATGAAAATGCCAGAAACCGCTCGG TACACTGCCTTGGTGAAAGGAAACCACAAGAAGGCTGCTGAAGAAATGGCTAAGGTTCTTGATCAGGACATGCCTTTAGA AGAACCGGTTACCGGGCGCGGGTTTGCAGCCGCGCCTGGCCCCTCTTATGGACTCTTCTCTTCAGAGTTTTTTAATAGGC ATGGCCTTCATCTTCTAGGAACAACTAGCACATGGTTCTTGTTGGATATTGCTTTCTATAGTCTTCAACTCACACAAAAA GATATCTACCCAGCCAGTGGGATTGTCCCAAAGGCTTCAAAAATGAATGCCATAGAGGAGGTGTTTCTACTCTCCAAAGC AATGTTTGTGGTGGCACTGTTTGCCACGGTTCCCGGGTACTGGTTCACGGTTTTCCTAATTGACAAGATTGGAAGGTTCA AAATCCAGCTTGTTGGATTCTTTCTGATGTCTGTTTTTATGTGGCTTTTGGGACACAAATATGGAGAATATGGGGGAGTT TCTCAATGTGACGCAGACTCCAAATATGAACTTTGTCATGGAAAACCTGCCATGTTTCTCATGCTATTTGGACTTACCCT CTTCTTTGCCAACTTTGGACCCAACACCACCACATTTATAGTGCCGGCAGAGCTTTTCCCGGCTAGGTTCCGCTCAACAT GCCATGGAATATCAGCAGCAGCTGGAAAATCAGGAGCTATAATTGGTGCTTTTGTGGTGCAAAGCTATACAGAGAAAGCC GACGACAAAACTAAAGGAAACAAGAAGGCGATCATGGCGCTTGCAGTTGTCAACTTGCTTGGATTCTTCTTCACTTTCTT GGTGCCGGAAACAAAAGGCCGATCACTTGAAGAAATCTCAGGAGAGGAGAAAGAACAGGGAAATATTGCTGCAGAAAATG CTAATGAGACAACAAATGATGCCCAAGAGGAAAAGAGAAGCACTATTGTTGATAAACCTCCCGGAGATTCGATAGTTTAA
CDS sequence (LotjaGi1g1v0130000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTACTAACCATGGGGTCCTCTCAGCTCTTGACTCTGCCAAGACACAAACCTACCATTTCAAGGCAATTGTGATTGC TGGCATGGGATTCTTCACTGATGCATATGATCTCTTTTGCATCACCGCGGTTACAAAGCTTATCGGTCGCCTTTACTACT ATGATCCCGCGACTCATAATCCAGGAAAGCTTCCAACAAATGTGAACAATGCCATAACAGGGGTTGCCTTGTGTGGCACG CTTGCAGGGCAACTCTTCTTTGGCTGGCTTGGTGACAAACTTGGTAGGAAAAAAGTTTATGGCATAACCCTTGTCACCAT GGTGGGTTGTGCTTTAGCATCAGGCCTCTCCTTTGGCTCATCTTCCAAAAGTGTGGTTTCTAGTCTCTGCTTCTTCCGAT TCTGGCTCGGGTTCGGCATTGGCGGAGACTACCCACTCTCAGCTGTGATCATGTCTGAATACGCCAATCAGAAAACCCGG GGTGGTTTTGTCGCGGCCGTGTTTGCTATGCAAGGAGTGGGGATACTGGTGGCTGGAGGGGTGGCCATGTTGGTCTCCTC ACTGTTCTTATCAGCATATCCTGCTGTTGATTTTGCAACTGATCCTGTGGTTTCTACTCAGCCAGAGGGAGATTTCGTTT GGAGAATTGTGCTCATGTTTGGTGCATTTCCTGCAGCCTGCACTTATTACTGGCGGATGAAAATGCCAGAAACCGCTCGG TACACTGCCTTGGTGAAAGGAAACCACAAGAAGGCTGCTGAAGAAATGGCTAAGGTTCTTGATCAGGACATGCCTTTAGA AGAACCGGTTACCGGGCGCGGGTTTGCAGCCGCGCCTGGCCCCTCTTATGGACTCTTCTCTTCAGAGTTTTTTAATAGGC ATGGCCTTCATCTTCTAGGAACAACTAGCACATGGTTCTTGTTGGATATTGCTTTCTATAGTCTTCAACTCACACAAAAA GATATCTACCCAGCCAGTGGGATTGTCCCAAAGGCTTCAAAAATGAATGCCATAGAGGAGGTGTTTCTACTCTCCAAAGC AATGTTTGTGGTGGCACTGTTTGCCACGGTTCCCGGGTACTGGTTCACGGTTTTCCTAATTGACAAGATTGGAAGGTTCA AAATCCAGCTTGTTGGATTCTTTCTGATGTCTGTTTTTATGTGGCTTTTGGGACACAAATATGGAGAATATGGGGGAGTT TCTCAATGTGACGCAGACTCCAAATATGAACTTTGTCATGGAAAACCTGCCATGTTTCTCATGCTATTTGGACTTACCCT CTTCTTTGCCAACTTTGGACCCAACACCACCACATTTATAGTGCCGGCAGAGCTTTTCCCGGCTAGGTTCCGCTCAACAT GCCATGGAATATCAGCAGCAGCTGGAAAATCAGGAGCTATAATTGGTGCTTTTGTGGTGCAAAGCTATACAGAGAAAGCC GACGACAAAACTAAAGGAAACAAGAAGGCGATCATGGCGCTTGCAGTTGTCAACTTGCTTGGATTCTTCTTCACTTTCTT GGTGCCGGAAACAAAAGGCCGATCACTTGAAGAAATCTCAGGAGAGGAGAAAGAACAGGGAAATATTGCTGCAGAAAATG CTAATGAGACAACAAATGATGCCCAAGAGGAAAAGAGAAGCACTATTGTTGATAAACCTCCCGGAGATTCGATAGTTTAA
Protein sequence (LotjaGi1g1v0130000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATNHGVLSALDSAKTQTYHFKAIVIAGMGFFTDAYDLFCITAVTKLIGRLYYYDPATHNPGKLPTNVNNAITGVALCGT LAGQLFFGWLGDKLGRKKVYGITLVTMVGCALASGLSFGSSSKSVVSSLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTR GGFVAAVFAMQGVGILVAGGVAMLVSSLFLSAYPAVDFATDPVVSTQPEGDFVWRIVLMFGAFPAACTYYWRMKMPETAR YTALVKGNHKKAAEEMAKVLDQDMPLEEPVTGRGFAAAPGPSYGLFSSEFFNRHGLHLLGTTSTWFLLDIAFYSLQLTQK DIYPASGIVPKASKMNAIEEVFLLSKAMFVVALFATVPGYWFTVFLIDKIGRFKIQLVGFFLMSVFMWLLGHKYGEYGGV SQCDADSKYELCHGKPAMFLMLFGLTLFFANFGPNTTTFIVPAELFPARFRSTCHGISAAAGKSGAIIGAFVVQSYTEKA DDKTKGNKKAIMALAVVNLLGFFFTFLVPETKGRSLEEISGEEKEQGNIAAENANETTNDAQEEKRSTIVDKPPGDSIV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | - | – | |
| PANTHER | 5 | 533 | 529 | 2.0E-284 | – | |
| PANTHER | 5 | 533 | 529 | 2.0E-284 | – | |
| TIGRFAM | 10 | 522 | 513 | 1.9E-184 | ||
| SUPERFAMILY | 11 | 521 | 511 | 1.16E-55 | ||
| ProSiteProfiles | 23 | 513 | 491 | 27.392 | ||
| TMHMM | 23 | 45 | 23 | - | – | |
| Phobius | 23 | 48 | 26 | - | – | |
| CDD | 24 | 512 | 489 | 1.09446E-153 | – | |
| Pfam | 24 | 520 | 497 | 3.3E-48 | ||
| Phobius | 49 | 67 | 19 | - | – | |
| Phobius | 68 | 87 | 20 | - | – | |
| TMHMM | 68 | 90 | 23 | - | – | |
| Phobius | 88 | 98 | 11 | - | – | |
| Phobius | 99 | 119 | 21 | - | – | |
| TMHMM | 99 | 121 | 23 | - | – | |
| Phobius | 120 | 130 | 11 | - | – | |
| TMHMM | 131 | 150 | 20 | - | – | |
| Phobius | 131 | 151 | 21 | - | – | |
| Phobius | 152 | 162 | 11 | - | – | |
| TMHMM | 163 | 185 | 23 | - | – | |
| Phobius | 163 | 192 | 30 | - | – | |
| Phobius | 193 | 211 | 19 | - | – | |
| TMHMM | 212 | 231 | 20 | - | – | |
| Phobius | 212 | 231 | 20 | - | – | |
| Phobius | 232 | 340 | 109 | - | – | |
| TMHMM | 341 | 363 | 23 | - | – | |
| Phobius | 341 | 361 | 21 | - | – | |
| Phobius | 362 | 372 | 11 | - | – | |
| Phobius | 373 | 391 | 19 | - | – | |
| TMHMM | 373 | 392 | 20 | - | – | |
| Phobius | 392 | 416 | 25 | - | – | |
| Phobius | 417 | 434 | 18 | - | – | |
| TMHMM | 418 | 440 | 23 | - | – | |
| Phobius | 435 | 489 | 55 | - | – | |
| TMHMM | 455 | 477 | 23 | - | – | |
| TMHMM | 490 | 509 | 20 | - | – | |
| Phobius | 490 | 508 | 19 | - | – | |
| Phobius | 509 | 559 | 51 | - | – | |
| MobiDBLite | 517 | 559 | 43 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Inorganic phosphate transmembrane transporter activity | Enables the transfer of a inorganic phosphate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
| Biological process | Phosphate ion transport | The directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0130000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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