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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0131100 |
| Transcript ID | LotjaGi1g1v0131100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC1 family kinase; TAIR: AT5G05200.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9ASX5|Y5520_ARATH Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic; TrEMBL-Plants: tr|A0A151U063|A0A151U063_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0131100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:21038526..21044269) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAATATGCTTTATTCTTAAAGGAAAAAGTACCAAATGATTATGCAACACACTTACAGCCATAAACACACTACTACA GGCTACAGCCATAAACTCGCCCCCTGCTGTGTCTCAACCTTCACCGTGTATCCATGGCGGTTTCGGGGTTGAGAAGTGGC GGTTTGCCTTTGCTCCACCATCATCATCATCATCATCGTTTTCCACTAGCTCCTCCTTCCTTCGTGAAGCTCAATGGCCA CTCCAATTCAAAGAGCTTCATTCTCTTAGCTCGCTATGGACAAGCTCAAGACGTTTCTTCCTCCTCTCGTCAATTCCAAG GTTCCTCCTTTCTCTCCTCCCTTATACTCACTCATTCCCTCATCAATTTTCACCAATTGGGTTTCTCTAGTTTCACAGAA TTTATCTTTTTTCTAGCAATTATAAAATCATTGGATTTATTTTTGGTTACTTTAAATTTGTAATGGAAATGTTTAAAATG TTGAAAATATCAGTTGGTTGTTATGAAATGATATTTTTATATTTATGAGTAAATATGTCTTTCTCAAATTAGTGTTACTG CACTTTGCTGTGGAATATTTGGATTTTGTAATTTTTTTTGGTGTTGAAGTGGATGTAAATTGTGTGCTTACCTCAGATAG AATTGAAAACCTGCCCAAGCTGGTGGAAGATATTCTTCAGACATCCATAAATACAGGTCCTAGGGGTGTCCTTAGGCTGG CTCAAGGGGTGCAAGCTTTCATTGGGGTGGGTCAAGAGTGGTTAACTGATGTCTCAAAGGTAACCTTAACACATTATATG TATGTTTATGTCTGCAGATTAAATGCATTGAACTCTTTCTCCATAAGCTAATCTGAACAACTTATAAAAATAAGCTCAAA ACAGCTTATAGGTAGCCATGAACTATTTAAATAAGCTCTCCGAAACACTTGCATAAGCGCTTATGCTATAAGTTAAGCTC AAAGCTTTTCTAAACGGGCCTAAATCTACACCTGCTATTTCAATAGTATTATGTGTCTTTTATTTCTCTCTTAATAGTTT TTTGGGGTGATTTTATGAAAAAATATTGACAGAACTAATAACTCTCTTGCATCATTATGCAGTCACCAAATTCATCTGCT GGGTTACCAACTGAAATGCAGCTTGGTTTACTGTCCCCCTTTTATTTGAGGAGGTTGTTTGAACGCTTGGGGGCAACCTA CATCAAATTAGGTCAGGTATGCATAGTTTCCCTTTCCCTTACTTCCTCCTCTCTCCTCTGTATTTGGTAATGTTAATTCA GTAGTAAAAAATCGTGACGTTTCCTCTGTTTCAGTATAAAGGACTCAATAGTCAATAGTCAATATTCAATTTTTTTGCAG TGTGAAAAAAGTAATTCAGATTGCTGATAAAATTTTATAGCCACTTGATATGATCATTTCCTCGACAAAAAGTTCTTCCT AATTTGATGGTTGATCTTCTTTATGCCATGCACTTTCATTCCTATGGTTACATTTGTTTTTGTTTGGTAGTTCGTAGCAT CAGCGCCGACACTGTTCCCAGCTGAGTATGTGCAAGAATTCCAGAATTGTTTTGACAGAGCCCCTGCAGTTCCTTTTGAG GAAATTCAATCCATATTGCGTAAGGAACTAGGAAGACCAATAGAAAGTGTTTACGAATATGTAGATCCGAAACCCCTTGC TTCTGCCTCTATAGCACAGGTATATTTTATACACCTATCTCTCTCTTTCAAGAACTATTAATTCAGAATACACTGTGGCT GCTAATGAAGTTGTTGTATGACTGTATCTTACATCTAGGTTCATGGTGCAAGGCTAAAAGGTTCGCAGGAGGATGTGGTT ATAAAGGTCTTAAAACCAGGAATAGAGGACATATTAGTCGCAGATCTTAATTTTGTCTATGTTGTTGCTCGGATATTTGA GTTCTTGAATCCTGAAATAAGCAGGACATCACTGGTATAAGCAATACTGACACTTTCACAGCTACATGAATATTTTTGCT ACAATATGAAAATATTGCTTCTATTTTAGCATCTGTTCACAAACAGTGAAGTTCATAACCATGTTGCCTATCTTTTCATC ATCCTCTGTTATTGTCCCTTCTACTAAATTCATTTTTCCTTCTTGTCTTGAGTAGAAACGGAATCTTAAATCTTCTTTAC TCACATTCTTCTGTTATTAGTTCTGTCATTTAAAAATGGTAGTGGCCAAGACTTTCTTGTAACGTAAGCATCCTTTTAGT AGGTTGGCATTGTCAAAGACATACGTGAGTCTATGCTTGATGAAGTTGACTTTTACAAAGAGGCTGCAAATATTGAGGCT TTCAGGAGATATTTAGAAGCAATGGGACTCACAGGTCAAGCAACAGCTCCAAAAGTGTATCAAAACTGCAGTACACGACA AGTTTTAACGATGCAAAGACTATATGGAGTTCCTCTTACGGACTTGGACTCCATAAGTTCCTTAGTTTCTAATCCAGAAA CCAGCCTGATAACTGCTCTGAATGTGTGGTATGAGTCCAATATTCTATTTGCAATTAGCATCCCTGTGCCTTCCCCTTTA ACATCAAATGTTTCTTGGTTAAACTTTCGCTGCAGGTTTGGAAGTTTGCTTGCATGTGAATCTTTCCATGCAGATGTTCA TGCAGGAAATCTGTGGCTTCTACGTGATGGCCGTATTGGATTTCTTGACTTCGGTATGCTTTATCGTCCTGGTTCATGTT TTACAAATGGTTTTATGTAAGCTGTAATCTCATGTAGTGCATTTGTCATCTATTAACATTTTAATGTTTCAAAATATTTG ATAGAACTCGACCAAGAACTGATATTATTTCTATGATAGAACCCTAATTCCCAATTTGGGAATCAGAGAAGATACAGGAA GAGATACTAAACACCCTCCCAAAACCCTAAGAGAGACCCAACGCTCTAAACCCTAATTTCCAAAGTGAATACAAAGATAC TCAATAGTCTCTCTAACTCACTTATTTATACTCACTTTCTAATTATGCTAAACCTAATAAAATATAAAATCTAATGCTGA CTGGATAAAAGTTACTAATAATAAAACCTAATACTAACTAGCTAACCCCGTGTACCTATCAATATTCTATACATTTTATT TGGAATTTAAGCATATTTGCATTTCCGACAAATCAGCATATTTTGTTGTGTTTATTGCAGGGCATTTTCTTGTAAACTCT TTTACAAGCTCGCTGATTTTAATGTATTCTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTATATATATAATCTAT GAAACAACATTCAATCTACAGGAATTGTTGGTCGTATATCTCCGAAAACGTGGGCTGCTATGGAAATCTTCCTAGGTTCA ATTGCCATTGAAGATTATGACTCAATGGCATCTGCATTAATTCAAATGGGTGCTACAGACAGGGATGTTAATGCTAAGGC CTTTGCCAGAGATTTGGCGAAAGTATTCTCATCAATTAAGGCAAGTATTGTAGCACACATAAACTCACTTGTCAGGTATA ACTTTGACTACATGGGTGAATCTACTAGAGAATGTGCATGTCTAGGCACATACATAAAGACTTATAATCCTGATCAATAA TGTAAAATGCAGTATTTATGATTTGCTCGGCTCACTCACAATAGAATATGCCAAGGCTCTTGCTTGATGCATCCCCTAAT GGATTTGGATCCTCTTATGTGAGTATTTCACATGACAAGGTCATGTGGAGAGAGAGAAACTAAGACCATACACAAAAAAC CTGTAGATATGTGGGGTCTTTGATTGTGTTTGGCATTCCACAAGGTAGATTATTATAGACAACCTTATGATTTTGTTCGA CTAAAATAAAGGTCGTAAATAAATAAAAAAAATTCACTTTTATAAGTTACATGAAGTAGCTTATAGCTTATTATATTTTT TTTTTCACTTTGAACTTCATTATTTTAATAAACTTTCTCGTTTATCCCTTAATTAATAACAACACTCTTTACAGATCCCT AAATATAATATAATTCAAAGGGTTCTAAATGTATTTCTGTTTTTTACTATTTTTGGGTTATGTTTTAATATTAACATTAT ATTTAATTTTTATACTTTTTTATTTTATTTTTTAATAAAATGTTTGTCTTCAAACAGAGATGATAAGAATTCAAAATTAA CTAAAAAATCTAAAATTGTAATTATGTAGAAATAGTGTCTACAAAATTAGAATATAGTTTATTCTTCTATATTGTTCTAA ATTTATCAGTTAGTTCAAGAGTTAATTTCATCAAATACCTCTAATTCAATCAGCTAAAAGGTTTCAGCTAAAAATTGGTT TTTTAGCTATCAACTAGTTTATCAACTCTTTTCCCCTAATATAAGCTTTGTATCTCTATCTCCTCACAACAGGGTCATGA GAGAATTCATGGGTATATGTATATCTATGGTAGTTTATTGGAGAATTGTTAGCAAACAATGTTCAATGTTTAGTTAAGAG AAATTGAAAGCGCTCACTCATAGTAATAGGCTGGTCTATTTTCATACCGGTCTTAGGTTGGGTTAAATATGAAGTGGTCT TATTGTATTAGTTTTTTCATAAACAAAGAATGTCATCTGGAAGTATTTCCATCTTTGAGTTATTGATTTTTCATAATGAT GCATATACCTGCCCCAAATCCAGTTGCAGTCATTGCTTATATTTTGCATTTGTGCTCGCCATGCAAGTGCAGGAGTTAGA CACTGAAATAGTTGTAGCAACTACGAGTGGACCAGCAACTGCTGTCGCGGCTAATATTGTTGTTGACGAGAGGCAGATGA ATGCCCTCTTTCTTGATGTGGTAAGCTATTATAGTGTGAAAACTAACTTGAATCTTCAGACAGCTTGTATGTCAATATAA AAGGTCCAAAATATGGGGTTTTGCGCTAAGCTTCATAATGATTTATGTACTTAGTTACCGTTCTGACAAATTAAGATGAT GCTTCTAATTTTCTGTCAGGTTATTAAACTGTAAGTTTTGAATGTCCGCAACATCATTTAATCCAGTATATGCTATTACT AGAAATTTGAATTTTGAAGCCAAAAATGTCTTTCTTCAACAAGAAATAGTATTGAAATATGATTTTCGATAAGCATAAGA AATTTTCAGATTAATTGAAGTCAAACTAACATAGTAACATTTCACAGTAGTAAAAGTAGAAATGAGAAGCATCATGTATC TATTTATACAGTGATCCTTCTTAACAGGGGAATTTCTTCTGTTGGCTGTTTGATGGAGGGTAGTTATTTTAACATTGCTT ATTTATGTGCTTTACAGGTTCGGGTTAGTGAATCTTATGGACTAAAGTTTCCTCGAGAATTTGCACTTCTCCTGAAGCAG CTTTTGTACTTTGACCGGTACACGCGGTTGTTGGCTCCCAATTTGAACATGCTGCGCGATCAGAGGATTTCTATTACCTC CAATAGAAGAACCAGATACTGAGAGAATTTTTAATGAGTGGACTGGGTACATAAAATATAGATGTATACCCCATTTTAGT TCAAAGGATTTTTATATGTATTGGTACTTTTGTATATATACATATAAAGTAGTCAATTGTTGTCCTGTAAGGGCTGTGAG CCTGTGACATTAAAATTGATACAAAAATAAATCCATAGTGTGGAGTTCACTTTCTGATAGCTACATTGGAAATGAAACTG GCTTGAATCTTGTTTCTTGAACAGCACCAACTTGGTTGCAAGTTGGAATTAAATAATACAAAAT
CDS sequence (LotjaGi1g1v0131100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGTTTCGGGGTTGAGAAGTGGCGGTTTGCCTTTGCTCCACCATCATCATCATCATCATCGTTTTCCACTAGCTCC TCCTTCCTTCGTGAAGCTCAATGGCCACTCCAATTCAAAGAGCTTCATTCTCTTAGCTCGCTATGGACAAGCTCAAGACG TTTCTTCCTCCTCTCGTCAATTCCAAGATAGAATTGAAAACCTGCCCAAGCTGGTGGAAGATATTCTTCAGACATCCATA AATACAGGTCCTAGGGGTGTCCTTAGGCTGGCTCAAGGGGTGCAAGCTTTCATTGGGGTGGGTCAAGAGTGGTTAACTGA TGTCTCAAAGTCACCAAATTCATCTGCTGGGTTACCAACTGAAATGCAGCTTGGTTTACTGTCCCCCTTTTATTTGAGGA GGTTGTTTGAACGCTTGGGGGCAACCTACATCAAATTAGGTCAGTTCGTAGCATCAGCGCCGACACTGTTCCCAGCTGAG TATGTGCAAGAATTCCAGAATTGTTTTGACAGAGCCCCTGCAGTTCCTTTTGAGGAAATTCAATCCATATTGCGTAAGGA ACTAGGAAGACCAATAGAAAGTGTTTACGAATATGTAGATCCGAAACCCCTTGCTTCTGCCTCTATAGCACAGGTTCATG GTGCAAGGCTAAAAGGTTCGCAGGAGGATGTGGTTATAAAGGTCTTAAAACCAGGAATAGAGGACATATTAGTCGCAGAT CTTAATTTTGTCTATGTTGTTGCTCGGATATTTGAGTTCTTGAATCCTGAAATAAGCAGGACATCACTGGTTGGCATTGT CAAAGACATACGTGAGTCTATGCTTGATGAAGTTGACTTTTACAAAGAGGCTGCAAATATTGAGGCTTTCAGGAGATATT TAGAAGCAATGGGACTCACAGGTCAAGCAACAGCTCCAAAAGTGTATCAAAACTGCAGTACACGACAAGTTTTAACGATG CAAAGACTATATGGAGTTCCTCTTACGGACTTGGACTCCATAAGTTCCTTAGTTTCTAATCCAGAAACCAGCCTGATAAC TGCTCTGAATGTGTGGTTTGGAAGTTTGCTTGCATGTGAATCTTTCCATGCAGATGTTCATGCAGGAAATCTGTGGCTTC TACGTGATGGCCGTATTGGATTTCTTGACTTCGGAATTGTTGGTCGTATATCTCCGAAAACGTGGGCTGCTATGGAAATC TTCCTAGGTTCAATTGCCATTGAAGATTATGACTCAATGGCATCTGCATTAATTCAAATGGGTGCTACAGACAGGGATGT TAATGCTAAGGCCTTTGCCAGAGATTTGGCGAAAGTATTCTCATCAATTAAGGAGTTAGACACTGAAATAGTTGTAGCAA CTACGAGTGGACCAGCAACTGCTGTCGCGGCTAATATTGTTGTTGACGAGAGGCAGATGAATGCCCTCTTTCTTGATGTG GTTCGGGTTAGTGAATCTTATGGACTAAAGTTTCCTCGAGAATTTGCACTTCTCCTGAAGCAGCTTTTGTACTTTGACCG GTACACGCGGTTGTTGGCTCCCAATTTGAACATGCTGCGCGATCAGAGGATTTCTATTACCTCCAATAGAAGAACCAGAT ACTGA
Protein sequence (LotjaGi1g1v0131100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVSGLRSGGLPLLHHHHHHHRFPLAPPSFVKLNGHSNSKSFILLARYGQAQDVSSSSRQFQDRIENLPKLVEDILQTSI NTGPRGVLRLAQGVQAFIGVGQEWLTDVSKSPNSSAGLPTEMQLGLLSPFYLRRLFERLGATYIKLGQFVASAPTLFPAE YVQEFQNCFDRAPAVPFEEIQSILRKELGRPIESVYEYVDPKPLASASIAQVHGARLKGSQEDVVIKVLKPGIEDILVAD LNFVYVVARIFEFLNPEISRTSLVGIVKDIRESMLDEVDFYKEAANIEAFRRYLEAMGLTGQATAPKVYQNCSTRQVLTM QRLYGVPLTDLDSISSLVSNPETSLITALNVWFGSLLACESFHADVHAGNLWLLRDGRIGFLDFGIVGRISPKTWAAMEI FLGSIAIEDYDSMASALIQMGATDRDVNAKAFARDLAKVFSSIKELDTEIVVATTSGPATAVAANIVVDERQMNALFLDV VRVSESYGLKFPREFALLLKQLLYFDRYTRLLAPNLNMLRDQRISITSNRRTRY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 56 | 534 | 479 | 1.7E-266 | – | |
| PANTHER | 56 | 534 | 479 | 1.7E-266 | – | |
| CDD | 168 | 417 | 250 | 3.95488E-95 | – | |
| SUPERFAMILY | 170 | 390 | 221 | 9.26E-22 | ||
| Pfam | 186 | 309 | 124 | 3.1E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0131100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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