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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0138200 |
| Transcript ID | LotjaGi1g1v0138200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Universal stress protein; TAIR: AT1G09740.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3S7B1|I3S7B1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0138200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:22557683..22561571) extracted from Lotus japonicus Gifu genome v1.2.
AACACCAAACCAGAACCTGCAACACAATCTGTATGTCTCCCGTGTATTTTTTTTTTTTGACAGAGTATCCCGTGTATTTG TAGTGTCAGAACATCTTTATTTTTTCTTTTTCTTGGGCAGCCATAACTTGTTGTCTAAACAAAACAAGACCAAAACAAAA CAAGCAGAGTCAAACAAGCAACTACAAAGAGACAGAGAGAGTCTGTGACCGCGGGAATAATCAACCAATCAATCAGCGAT GTCGCAGGGAAACCTCGGTTGCGTAGCAGTCGCCGTCGACGGCAGCGACGAGAGCATGAACGCTCTCCGTTGGGCCATGA CAAACCTCAAGCTCCGACCACAAACACCCGATTCCACCACCGCCGGTTGCTTCCTCATCCTCCACGTCCAATCTCCGCCG TCCATCGCCACCGGCCTCAACCCCGGTCCCATCCCCTTCGGTGGCCCAAGTTCTGTTCACTTTCCTCTCACTTCAATTCC ATCATCATTCAATCTTTGACTTTTGACTTGAACTGATAGATTCATTGATTGGTGGTTTTGTTTACCAGGTAACCTTGAAG TACCTGCGTTCGCTGCTGCCATTGAAGCTCACCAGAAGCGTATCACCGATTCTATACTAGATCATGCTCTTGGAATTTGC TCAGAGTTCAATTTTACTGTATGTTGCATTTCCTCTTTTTTCCCCTTTTTTATTTGACTTTGCTGTGTGTAATTATGTAG CACGAAAATGTTGAATCCTTAACTGGGATATTGTATTGAACTCAATGGCTACTCAGACTTAGGCCACTTTCGGGAGAGCT TATTTGAGTTTATCTGATAGCATAAGCGCTTGTGTGCAAGTGTTTAGGAGAGCTTATGCGAACAGCTTATGACCTACCAT AAGCTGTTTTGAGCTTATTTTCGTAAACTACTCAGGATAGCTTATGAAAAAGAGCTTTAGCTTATTTTCAATTTATTTTA ATAAATTTTTTAAAATAGCTTATGAATAAGCGCTTATGTCTTAGTAGCTGTTTGTGACTTGGAACATGTGAAATCAACCT TGATGCAAATTGCAAAACAAGCACAAATTTAGTAGCTGTTGTTACAATTTCCTTTGCAATTACTGGAATTTGTGAAACAT TGCTGAGGCAGTTGTAGGGATGAGAGATCTATAAAATAGAACTATTTTTCAGTGGTAAAAGAACATTAGGATAAGGAGAT GGTGCTGGAACAGTTTATTTTTTTCAGCTTATTTTATGATGTAAGCAAAGCACTTATTTCAACTTCATTCATTGAACTTA TAAAAGTAGTTATTTCAAGTTATATAAACTTATTTCGAGTTTATTTCAATAATTTCTCATTTAGCTTTTTTACTGAGGAA GAGGCTAGTGGGGATTTGGATTTGAAGGGGTTTTAAAATTATAATATTTAACATAAAAGGAACAAACTTGATTAATTTGT TGTTAGTGCCTGAATTAAGAAGTGATTTGTTGTTTTTTCCAGCAATAATTTTTGAAAGTTGAATGATAATGACAAAAACT AAACTGATTTAGAAATAATTTTAATTTAGTGCACACAATTTAGTTTATAGAATATATCAACCTAACTAATAGGAACTGCC AAATTTGTTTCCTTGTCTCTTTCTATTTGTAAAATCAGTTTATGATATTACTTTTTTGGCTTTTTTTTTCTGTTGAAATG TTTATTTTCTATATTGTCAATGGTGTTACTTTGAGGAAATAACTATTTTTGGCCATTCTCCCTTGAATTTAATTCAAACC TTTGGCTCATAGTATGATTGTCAGCTAAGTTGCATTTGACTTATCCTCTATCTTTATCAGGAGAAGGTGAGGACCCATGT TGTTATTGGAGATCCAAAGGAGAAGATTTGTGAAGCTGTACAGGATCAGCATGCTGATGTGCTTGTGATGGGGTCTCGTG CATTTGGCCCCATTAAGAGGTACAAACAAATTAACTAATTGACAAATTTTGTTAAGTGCCAGAATGGCTGAAAGTAACAT ATAAGTTTGCACTGGCACATGGCATAGTTTATATGTGCAGGAAGCCTGATTAGGACAGTACATACAGATCACAAAATGAC TTGATAAACTATCTGGACCATTTTTTTCCTTTATATGTGAGAATGTTAACAATTGCCAGAGCCCACATTGTGGTTCTACT GTAACGCTGGAGAAGAACTTGGTAGTTTTCGCACTTACATTGCATTTTTTACTTTCCCTATAAAAGTTTCCCAATTTTGT TAGCACTATTATGGTAGTGAATAACAACAGTAGCAGAGTGAATTATTCATTACAACCCTTGCTAAATATGCCAATAAAAT TAAAAAGACCACATAACCAGCCTCTGAATCTTTAATTTATTTTCTTAATCTTCACTTCTTCAGCCGTTTGACTGCAGATA TAGATCTGCTTCCATTTACATTTTTGACATTGACCAAATGCCAACATTTTATATCAAATTCAAACCCTTGTTTTTACTTT AAAAACTTTTTGGTTCTTGTTTTAATTTGAATTTTGAAGATGGAAACTATGTGGAATCCATATATAATGCCTTTTTCCCC CCACCTTTTCTGGCTTACAGGATGTTCCTGGGAAGTGTTAGCAACTACTGCGCCCACCATGCTGAGTGTCCTGTCATTAT TATCAAGGGAAACGACAGTGTCAATAAGAGAAACTAATTCACTTCTACTATGCTGCAATTACTATTGATGAGTAGGTCTG GCACCATTTTTATGTTGCATTCCTTGGATTTGTTTAATGTTCAGGATATGAGTGAAGAGTTATGCAGTTAAATTTAGAAC ATGAACTGAGTTTGCTGCATATCACAATTTTAACATTTTAGGCCTTATATATTTGATAACTGCCCTTCGTACTATAGAAC TTCATATTTTCAACATACCTTGCAGCTAATAGTTGAACTTACCTGTTTGAGCTGCTAGTAGTCTACTCTACTTAAACGAA GATTTAAAAGAAAGACAACCCTAACGTTTTGTGGAGGCTGTGAACCAGAATACTTGCCCTCCTTGGTTGTGTTTTTATCT CTTTGTAATCCTTTTATATAGACCATAAACATGCATAATTCAATGATCAAGTTCTTTTGTTACCCTATGTTTTTATCAGG ATATCTCTATCTTTAGAAACTAGTGGTGATTTATAGCCATGTGAAATGTATGAATTTTTAAAAAATAAGCTGCCATACTT TAAAGTAAAGCATGATTAAATATTAACTACTTTTCAGTATTATTATTGATAATTTCTCAGTACTTTTGTTTCTTGTGGAT CCCTTTTGTTAGCGCTGAATCTTGCTATCACTTACAATTTACAAATTAGCAGTGTTCTGAAACAATTTTTTTTTTTGGTT ACATGGAGGGGCATGGCCCCAGTGTTCTGAAACAATTTTGATTTCATTGTTTGGGTACTTCAGGTGAGATTTTCCACATT TCAGTTGCTGATGGTGCATCCCTGGCTTCCCAATTGATTAGAACAAAAGTTTTTTCATGCTTCGGATTTGCATGCTCTTG CTAGTCCCGTGTCATGACTCAGCTTTGAAGTTTATGTCGCCAATGCCGGTCAGGTACTGCTACAAGTACAGGTTTTCACT ATTTGTTGATAATAATGCTGCAGTGCATTTGAAATTCTTTCAGTTAAGAGTGTTTTTCAACTCTGCTTTAAATCTGTGAT TGTTGTCGCAACTGATTCAAAAAGAGATATTTGACTCCCAAATGCTTATTTTGTTTTTGAATCTGTACAATGTTGTTGTA CACAAATGTTGTATCACTATTTCTCCTTTGACTGGCCAGTTCTAGTTGTGATATGCAGCAAACTAGCCAGTAATCATGCA GAACTCATGTATAAATTGATATTTATATGATTTATGATAGATTTTTTGA
CDS sequence (LotjaGi1g1v0138200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGCAGGGAAACCTCGGTTGCGTAGCAGTCGCCGTCGACGGCAGCGACGAGAGCATGAACGCTCTCCGTTGGGCCAT GACAAACCTCAAGCTCCGACCACAAACACCCGATTCCACCACCGCCGGTTGCTTCCTCATCCTCCACGTCCAATCTCCGC CGTCCATCGCCACCGGCCTCAACCCCGGTCCCATCCCCTTCGGTGGCCCAAGTAACCTTGAAGTACCTGCGTTCGCTGCT GCCATTGAAGCTCACCAGAAGCGTATCACCGATTCTATACTAGATCATGCTCTTGGAATTTGCTCAGAGTTCAATTTTAC TGAGAAGGTGAGGACCCATGTTGTTATTGGAGATCCAAAGGAGAAGATTTGTGAAGCTGTACAGGATCAGCATGCTGATG TGCTTGTGATGGGGTCTCGTGCATTTGGCCCCATTAAGAGGATGTTCCTGGGAAGTGTTAGCAACTACTGCGCCCACCAT GCTGAGTGTCCTGTCATTATTATCAAGGGAAACGACAGTGTCAATAAGAGAAACTAA
Protein sequence (LotjaGi1g1v0138200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSQGNLGCVAVAVDGSDESMNALRWAMTNLKLRPQTPDSTTAGCFLILHVQSPPSIATGLNPGPIPFGGPSNLEVPAFAA AIEAHQKRITDSILDHALGICSEFNFTEKVRTHVVIGDPKEKICEAVQDQHADVLVMGSRAFGPIKRMFLGSVSNYCAHH AECPVIIIKGNDSVNKRN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 170 | 168 | 2.3E-88 | – | |
| PANTHER | 3 | 170 | 168 | 2.3E-88 | – | |
| Gene3D | 3 | 177 | 175 | 5.0E-39 | ||
| PRINTS | 6 | 24 | 19 | 4.5E-16 | ||
| CDD | 9 | 168 | 160 | 1.20125E-32 | – | |
| SUPERFAMILY | 9 | 173 | 165 | 5.27E-32 | – | |
| Pfam | 9 | 169 | 161 | 1.2E-25 | ||
| PRINTS | 129 | 141 | 13 | 4.5E-16 | ||
| PRINTS | 147 | 169 | 23 | 4.5E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0138200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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