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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006015
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 34 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.477s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0114039.1
n.a. PREDICTED: universal stress protein A-like protein-like [Cicer arietinum] gi|502148490|ref|XP_004507182.1| chr0 49882562 49884618 -
2 domain predictions
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Lj0g3v0202679.1
n.a. PREDICTED: universal stress protein A-like protein-like [Cicer arietinum] gi|502096617|ref|XP_004490794.1| chr0 100362825 100365264 +
2 domain predictions
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Lj0g3v0232499.1
n.a. PREDICTED: universal stress protein A-like protein-like [Cicer arietinum] gi|502096617|ref|XP_004490794.1| chr0 120673311 120674382 +
2 domain predictions
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Lj0g3v0333639.1
n.a. PREDICTED: universal stress protein A-like protein-like [Cicer arietinum] gi|502141487|ref|XP_004504522.1| chr0 174607716 174610867 -
2 domain predictions
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Lj0g3v0359559.1
n.a. universal stress protein [Arachis hypogaea] gi|194466125|gb|ACF74293.1| chr0 189284278 189287169 +
2 domain predictions
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Lj1g3v0193150.1
n.a. Universal stress protein A-like protein [Medicago truncatula] gi|357489965|ref|XP_003615270.1| chr1 2144937 2148752 -
2 domain predictions
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Lj1g3v0193150.3
n.a. Universal stress protein A-like protein [Medicago truncatula] gi|357489965|ref|XP_003615270.1| chr1 2144937 2164237 -
2 domain predictions
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Lj1g3v3441280.1
n.a. early nodulin ENOD18 [Vicia faba] gi|11602747|emb|CAC18556.1| chr1 39650758 39652408 +
2 domain predictions
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Lj2g3v0980450.1
n.a. PREDICTED: universal stress protein A-like protein-like [Glycine max] gi|356571299|ref|XP_003553816.1| chr2 15142736 15145434 -
2 domain predictions
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Lj3g3v3236610.1
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein [Theobroma cacao] gi|508786637|gb|EOY33893.1| chr3 39855576 39857374 -
2 domain predictions
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Lj5g3v1514660.1
n.a. PREDICTED: universal stress protein A-like protein-like [Cicer arietinum] gi|502117003|ref|XP_004495667.1| chr5 22081494 22083441 +
2 domain predictions
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Lj5g3v1600660.1
n.a. PREDICTED: universal stress protein A-like protein-like isoform X2 [Cicer arietinum] gi|502117712|ref|XP_004495909.1| chr5 23114109 23115065 +
2 domain predictions
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Lj6g3v1904520.1
n.a. PREDICTED: universal stress protein A-like protein-like [Glycine max] gi|356558131|ref|XP_003547361.1| chr6 21375930 21377648 +
2 domain predictions
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LotjaGi1g1v0098500.1
n.a. Universal stress protein family protein; TAIR: AT3G03270.2 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SUJ0|I3SUJ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0098500 LjG1.1_chr1 14997601 15000454 +
2 domain predictions
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LotjaGi1g1v0098700.1
n.a. Universal stress protein family protein; TAIR: AT3G03270.2 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8VYN9|PHO32_ARATH Universal stress protein PHOS32; TrEMBL-Plants: tr|A0A151S0L0|A0A151S0L0_CAJCA Universal stress protein A-like protein; Found in the gene: LotjaGi1g1v0098700 LjG1.1_chr1 15056499 15060985 +
2 domain predictions
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LotjaGi1g1v0098700.2
n.a. Universal stress protein family protein; TAIR: AT3G03270.2 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SUJ0|I3SUJ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0098700 LjG1.1_chr1 15057167 15058569 +
2 domain predictions
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LotjaGi1g1v0138200.1
n.a. Universal stress protein; TAIR: AT1G09740.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3S7B1|I3S7B1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0138200 LjG1.1_chr1 22557590 22565122 +
2 domain predictions
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LotjaGi1g1v0138200.2
n.a. Universal stress protein; TAIR: AT1G09740.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3S7B1|I3S7B1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0138200 LjG1.1_chr1 22557683 22561571 +
2 domain predictions
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LotjaGi1g1v0576500.1
n.a. Universal stress protein; TAIR: AT3G53990.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8VYN9|PHO32_ARATH Universal stress protein PHOS32; TrEMBL-Plants: tr|I3SBV4|I3SBV4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0576500 LjG1.1_chr1 111517678 111520799 +
2 domain predictions
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LotjaGi1g1v0765200.1
n.a. Universal stress protein; TAIR: AT2G47710.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|C6SXR1|C6SXR1_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0765200 LjG1.1_chr1 133759273 133763177 -
2 domain predictions
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LotjaGi2g1v0244800.1
n.a. Universal stress protein A-like protein; TAIR: AT5G14680.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3S8G1|I3S8G1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0244800 LjG1.1_chr2 70944640 70947185 -
2 domain predictions
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LotjaGi3g1v0221100.1
n.a. Adenine nucleotide alpha hydrolases-like protein; TAIR: AT3G53990.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8VYN9|PHO32_ARATH Universal stress protein PHOS32; TrEMBL-Plants: tr|I3SUH8|I3SUH8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0221100 LjG1.1_chr3 33377457 33381453 +
2 domain predictions
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LotjaGi3g1v0326200.1
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein; TAIR: AT1G11360.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8L4N1|PHO34_ARATH Universal stress protein PHOS34; TrEMBL-Plants: tr|A0A1J7H5X8|A0A1J7H5X8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0326200 LjG1.1_chr3 69365018 69369867 +
2 domain predictions
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LotjaGi3g1v0326200.2
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein; TAIR: AT1G11360.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8L4N1|PHO34_ARATH Universal stress protein PHOS34; TrEMBL-Plants: tr|A0A1J7H5X8|A0A1J7H5X8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0326200 LjG1.1_chr3 69365215 69365997 +
2 domain predictions
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LotjaGi3g1v0438100.1
n.a. Adenine nucleotide alpha hydrolases-like superfamily protein; TAIR: AT1G11360.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8VYN9|PHO32_ARATH Universal stress protein PHOS32; TrEMBL-Plants: tr|I1LUA5|I1LUA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0438100 LjG1.1_chr3 85123955 85130012 -
2 domain predictions
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LotjaGi5g1v0111800.1
n.a. Universal stress protein A-like protein; TAIR: AT3G11930.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SSF4|I3SSF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0111800 LjG1.1_chr5 22154460 22157705 +
2 domain predictions
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LotjaGi5g1v0111800.2
n.a. Universal stress protein A-like protein; TAIR: AT3G11930.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SSF4|I3SSF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0111800 LjG1.1_chr5 22154460 22157705 +
2 domain predictions
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LotjaGi5g1v0111800.3
n.a. Universal stress protein family protein; TAIR: AT3G11930.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SSF4|I3SSF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0111800 LjG1.1_chr5 22154460 22157705 +
2 domain predictions
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LotjaGi5g1v0111800.4
n.a. Universal stress protein A-like protein; TAIR: AT3G11930.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SSF4|I3SSF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0111800 LjG1.1_chr5 22154460 22157705 +
2 domain predictions
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LotjaGi5g1v0111900.1
n.a. Universal stress protein family protein; TAIR: AT3G11930.4 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SSF4|I3SSF4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0111900 LjG1.1_chr5 22169052 22172296 +
2 domain predictions
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LotjaGi5g1v0229000.1
n.a. Universal stress family protein; TAIR: AT3G62550.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3T150|I3T150_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0229000 LjG1.1_chr5 53626978 53637033 +
2 domain predictions
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LotjaGi5g1v0245800.1
n.a. Universal stress family protein; TAIR: AT3G62550.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3T5G2|I3T5G2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0245800 LjG1.1_chr5 55405098 55407816 +
2 domain predictions
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LotjaGi5g1v0251100.1
n.a. Universal stress protein; TAIR: AT2G47710.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein; TrEMBL-Plants: tr|I3SNA4|I3SNA4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0251100 LjG1.1_chr5 55937974 55946548 -
2 domain predictions
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LotjaGi6g1v0258300.1
n.a. Universal stress protein; TAIR: AT3G17020.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8VYN9|PHO32_ARATH Universal stress protein PHOS32; TrEMBL-Plants: tr|I3SXN2|I3SXN2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258300 LjG1.1_chr6 57103724 57105670 -
2 domain predictions
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