Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0143000 |
| Transcript ID | LotjaGi1g1v0143000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phospho-2-dehydro-3-deoxyheptonate aldolase; TAIR: AT1G22410.1 Class-II DAHP synthetase family protein; Swiss-Prot: sp|P27608|AROF_TOBAC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic; TrEMBL-Plants: tr|I1JGU8|I1JGU8_SOYBN Phospho-2-dehydro-3-deoxyheptonate aldolase; Found in the gene: LotjaGi1g1v0143000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:23671362..23676484) extracted from Lotus japonicus Gifu genome v1.2.
CTTGAAGTTCATGATAATAAACAAATAATTTAATTTCCACACATTACTAAAAAGTTGTTAAAAAAAACCATTTTCCTCCG CTTGGCCCGCCGGCGGCGTTTAGTAGGTAGACAACCGATCTAAGTCACACTTCATTGCCAAACCAAACCAAACAATCTCA CCAAAATCCCCAAAATACCCTCAAGAACTTCAAATTGACAAAAACACCCTCCCCCAACTACCCCATGTCTTTACCGAACA CACACACACCACCAACAACAACCACCACCACAACAAGCCCTTGACGCAGCCCTTTTTTTTCTCTATAAAACCCTCACCAA ACTCATCTCCATTTTTCAGGCCACACCAATTTTTCTCACACAAAGAAAGAAAAAAGTGACCTGAAAATTTTCTCATTTCA CATTTCTCAATTCTCATATCTCATCACAACAAAGCAAAGCAAACACATTTTCCACTATGGCTATCTCTTCCACTGCCACA TCCCTCAAATCATTAACCCCTCAAACCCACTCCCTCATTCCCTCTTCCACCAAACTCAACCAATCTCCATTCTCCAGGCC CAAGCCCAAACCCGGGCCCAATTCCTCCATCTTCGCCGTCCACGCCGCCGAGCCTGCAAAAAACCCCGTCGTCTCCACCG ACAAGCCGCAGATTCCACCGCAACCCACCGCCTCCACCGCCGTCCGAAATGCCGGGACCGGTAAATGGACCGTTGAGAGC TGGAAATCGAAGAAGGCTTTGCAGCTACCTGAGTACCCGAGCCAGGAGGAGCTTGACGCCGTGCTCCAAACCCTCGACGC GTTCCCGCCGATCGTGTTCGCCGGAGAAGCCCGGACGCTTGAGGATCATCTCGCACAGGCCGCCATGGGAAACGCTTTCC TCCTTCAGGGTGGTGACTGCGCTGAGAGCTTCAAGGAGTTCAATGCCAACAACATTCGTGACACGTTCCGTATCATTCTT CAGATGAGTGTTGTCATGATGTTCGGTGGCCAAATGCCTGTCATCAAGGTAACAATTCATGTGGAAATTTGTGGATTTGA GCTGAATTTTTTGATGTTAGGGTTTGTTTTGGTTGAAATGTTGAATGGTGTTGATTAATTTTGTTTGTTTAGGTTGGAAG AATGGCGGGTCAATTTGCGAAGCCGAGATCGGATTCGTTTGAGGAGAAGAATGGTGTGAAGCTTCCGAGTTACAGGGGAG ATAACATCAATGGGGATACGTTTGATCTGAAGTCAAGGACTCCGGATCCACAGAGGATGATCAGGGCTTATTGCCAAGCT GCGGCGACGCTCAATCTTCTCAGAGCTTTTGCCACTGGAGGGTATGCTGCTATGCAGAGGGTTACTCAATGGAATCTGGA CTTCACTCAGCAGAGTGAGCAGGGAGATAGGTATGTTCATTTGTTTGTTGGTTTGTTTGTTTGCAATTGTAATTTTCACT CTGCTTTTGGTTGTTTTGTCTTTCTTGTGTTGTATTGGATGGAAGAGGAATATAGGAATATTACATTAAGTTGTTAATTT TCACATGTTGAATAAGTTCCCTGATCTACTTTGGATTGTTTAGTTGCCCAAAATTCAGATTGGCCTATATTGATAAAAAG TAGAATTTAGATTGCCCCTTCTTTTGGTTGTTTAGATTTGTACAAAAGGGTAAAATTTAGTTTTACTTTTTTGATGAAAA GCTATTTTGGATTTAGAGAAGATATGGTCAAGTGGTGATTGATTACTTGTAAGGGTGGATGCATGTCTAAGGTGGTGGGT ATTATTAGGTCGTTGTCCTTCTCTTAAATGATGAAGCACAACTTGTCCAGGTGGGGTCTCAGTTCTGTGAAAGTTTTGTT AAATCAACATGAGTTTCATGAGTTACTCACAAAATGATGCTTAGGGCTATGATGATAGATAGTTACCTACACCTATGTTT ATATGATGATAGATAGTTACCTACCCCTATGTTTTTTCCAACATAAGTGACCTAACGGGTGAATTTGGAGCCATTCCATT GGTCACCCTAATATACTCAGTAACTCATTCACCATTATTTGTGAGATGTAATTTGAATCACATGTGCAACTTTCCCTTTT TCCAACCACAAAGGTCAATGTTAGAGATTCTAAAGGGGTTCATAAGTTATTAACTTTTATAACTTTTCAAGTTTAGAGTG TGATTGGGCATTGGCTTTTTTTGCTTTATTATCTAAAAGGAGAGTTACACTATTGTTCTTATATACTGCTTTTCTAGAGA AACATTGATATGATTAATTTGCCTGTGTAAATTCTTTCTTTCTTTCATTTTTACATGGTCTAGTTATGTTCCTCCTGGAT ATATTTGAAGCTTGAGATAAATTAACTCTGTTCTTGGCATGGCAGGTACCGAGAGCTTGCTAACCGAGTTGATGAGGCCC TTGGGTTCATGGCTGCTGCTGGGCTCACAGTGGACCATCCCATAATGAAAACAACTGATTTCTGGACATCTCATGAATGC TTGTTATTGCCATATGAACAATCCCTTACTAGGTTGGATTCAACATCTGGTCTCTACTATGATTGTTCAGCCCACATGAT TTGGGTTGGGGAGCGAACCAGGCAGCTGGATGGTGCCCATGTTGAGTTTCTTAGAGGAGTTGCTAATCCCTTGGGAATTA AGGTTTGGACTTGATTCCTATCATCCAACTTCACTTCATGTTCCTTCAAGTCAGGGCAGTTCTACATTCCCCCAGTCAAT AAACCTAAACTGTTCGATCAAGATTGGTCGGCTTAGAAATTAGTTTAAAATTTGAACTGTCCGATCTTGAATCGAGTAAC TCAAATTTTTTAACAGCATGAAGTTAGGAATTGTCTGACAGGGGGGAAGTCCGAATTCCATTAACTAGCTTGATTAGTAC ATTAAACCACTTAGCATATTCTCCATGATTCTGAAGTATCTAATTCTTGATTTCTTATCATGTATGTTGCTTTATTGAAG TTCTATGTTTTTTATTCATTGGCAGGTAAGTGACAAGATGGATCCAAATGAGCTTGTCAAACTCATTGAGATCTTGAATC CCCAAAACAAAGCAGGGAGAATAACAATAATCACGAGGATGGGAGCTGAGAACATGAGAGTGAAGCTTCCACATTTGATT AGGGCAGTGCGCAGAGCAGGACAAATTGTCACATGGGTCAGCGATCCTATGCACGGAAATACCATTAAGGCTCCATGTGG TCTCAAAACTCGTCCCTTCGATGCCATCAGGGTATATTCCTATTATACTTTCTCTCTAATAATTTTTCGTAAGTGGTTGT CTGTCTGGTCTTAAAATATAAGTATGATTGGATTAAAATCAAACTTTTAGTTTTTGTCATCTTCCTCAGCAGAAAATGAT ATGGTTTCTCTGGTCATAATCTTTGGAGAAAAAAATATCTCGTCTTTAAAAGATGTAAAACATTGAAAAAGCATTTGACA AAGTATATGAGCTGGTCCTTAGTGGTGGGCTACCAAACTTGAAATTTTATATATTATATATAGATTTTAGAAGATGGTGT GGTAGGTGGAAGAAGGTCTACTTGTTGAAGTAGGTGAAATAATGAAGTATTCCAGTCATTTTTTAGGTATCATTATGGGA TTTGGTTGCATTTCTTAATCGGTAGGTGGGATTGAAAGTTGGGGGCCCATATGGGTGTGAATGTTTATTCTTGCCAACTT TTACAAAGAAACTTAGTTGCAATTTGTGAGACTCACAAGAGTATTGGTATTTGATTAAGATTCATGATGCCACTAATAGC CTATATGAATCCCCGATTGTGACACCAAAATCTACTTACAAAAGCTTCTTCCTGAATTTATTTTAGAATTAATTATAGAA AAAATTTCAAACATGCACTAACTTTTTTTTCACTTGATCAATTGGACAGGCTGAAGTGCGAGCATTCTTTGATGTGCATG AACAAGAAGGAAGCCACCCGGGTGGAGTTCATCTAGAGATGACGGGTCAGAACGTGACTGAGTGCATTGGTGGGTCGAGA ACAGTCACCTTCGATGACCTGAGCTCACGTTACCACACACACTGCGACCCAAGGCTCAATGCTTCTCAATCTCTTGAGCT TGCTTTCATCATCGCTGAACGGCTAAGAAAGACTAGGATCAAGACACAGCAACCTCTTGCCCCTTTAGGACTGTGAAAAG GGCTTTGAAATGAACCCCAACAAAATACCTTTGTTTTTTTTGCTCTATATTTATCGATGGCTACTACTTTGTTGTTGTTA CACATGGATGTGGACTTGGTCCTCGGTTACTTAGTTAGCTATGTTGTGCACTGTGTTTGTATGTGTATACTGCCTTGTAA TGCTTTGAGCTTGGAAGGACATGAGTCAATTATTAATAAAGGAAGCGAAAAAGTTTCGATTGCATTGATATATCGAGTCC GTGACCAGCACTAGCTTGCTATTCTCTACTTCAATAATAATCTAGTTACACTCACTCCACTCACATTCACATATGAAATA AGATGTGATAGGAAAAGAAGAAAAATGGAAAAGAGGGGTGTAAATATTACAAAATTTTCTACTTTTACTGGGGTCTTGTA TTTCTCGGTATGATGTTAGACCTTTTTATAGAGGTCACAGTGTGACCGTCACACTATAAGACGCTAAGAACTTGCACATA TGAGCTGCCCCGGGCGTCGAACAGTCAGCAAGACGCTAAGAACTTGCACATATGAGCTGCCCCGGGCGTCGAACAGTCAG CTCAGAACTGGTACAGACAAGGGGACTCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTACGGATGTTGACGC AATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATG ACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTG TCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCACCGAGGAAAGAAGATCCTGTTGAGCTTGACT CTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGCTGCCCTTAAGCGTACCAAAGTTTTTTTGCCGTGG CCA
CDS sequence (LotjaGi1g1v0143000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTATCTCTTCCACTGCCACATCCCTCAAATCATTAACCCCTCAAACCCACTCCCTCATTCCCTCTTCCACCAAACT CAACCAATCTCCATTCTCCAGGCCCAAGCCCAAACCCGGGCCCAATTCCTCCATCTTCGCCGTCCACGCCGCCGAGCCTG CAAAAAACCCCGTCGTCTCCACCGACAAGCCGCAGATTCCACCGCAACCCACCGCCTCCACCGCCGTCCGAAATGCCGGG ACCGGTAAATGGACCGTTGAGAGCTGGAAATCGAAGAAGGCTTTGCAGCTACCTGAGTACCCGAGCCAGGAGGAGCTTGA CGCCGTGCTCCAAACCCTCGACGCGTTCCCGCCGATCGTGTTCGCCGGAGAAGCCCGGACGCTTGAGGATCATCTCGCAC AGGCCGCCATGGGAAACGCTTTCCTCCTTCAGGGTGGTGACTGCGCTGAGAGCTTCAAGGAGTTCAATGCCAACAACATT CGTGACACGTTCCGTATCATTCTTCAGATGAGTGTTGTCATGATGTTCGGTGGCCAAATGCCTGTCATCAAGGTTGGAAG AATGGCGGGTCAATTTGCGAAGCCGAGATCGGATTCGTTTGAGGAGAAGAATGGTGTGAAGCTTCCGAGTTACAGGGGAG ATAACATCAATGGGGATACGTTTGATCTGAAGTCAAGGACTCCGGATCCACAGAGGATGATCAGGGCTTATTGCCAAGCT GCGGCGACGCTCAATCTTCTCAGAGCTTTTGCCACTGGAGGGTATGCTGCTATGCAGAGGGTTACTCAATGGAATCTGGA CTTCACTCAGCAGAGTGAGCAGGGAGATAGGTACCGAGAGCTTGCTAACCGAGTTGATGAGGCCCTTGGGTTCATGGCTG CTGCTGGGCTCACAGTGGACCATCCCATAATGAAAACAACTGATTTCTGGACATCTCATGAATGCTTGTTATTGCCATAT GAACAATCCCTTACTAGGTTGGATTCAACATCTGGTCTCTACTATGATTGTTCAGCCCACATGATTTGGGTTGGGGAGCG AACCAGGCAGCTGGATGGTGCCCATGTTGAGTTTCTTAGAGGAGTTGCTAATCCCTTGGGAATTAAGGTAAGTGACAAGA TGGATCCAAATGAGCTTGTCAAACTCATTGAGATCTTGAATCCCCAAAACAAAGCAGGGAGAATAACAATAATCACGAGG ATGGGAGCTGAGAACATGAGAGTGAAGCTTCCACATTTGATTAGGGCAGTGCGCAGAGCAGGACAAATTGTCACATGGGT CAGCGATCCTATGCACGGAAATACCATTAAGGCTCCATGTGGTCTCAAAACTCGTCCCTTCGATGCCATCAGGGCTGAAG TGCGAGCATTCTTTGATGTGCATGAACAAGAAGGAAGCCACCCGGGTGGAGTTCATCTAGAGATGACGGGTCAGAACGTG ACTGAGTGCATTGGTGGGTCGAGAACAGTCACCTTCGATGACCTGAGCTCACGTTACCACACACACTGCGACCCAAGGCT CAATGCTTCTCAATCTCTTGAGCTTGCTTTCATCATCGCTGAACGGCTAAGAAAGACTAGGATCAAGACACAGCAACCTC TTGCCCCTTTAGGACTGTGA
Protein sequence (LotjaGi1g1v0143000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAISSTATSLKSLTPQTHSLIPSSTKLNQSPFSRPKPKPGPNSSIFAVHAAEPAKNPVVSTDKPQIPPQPTASTAVRNAG TGKWTVESWKSKKALQLPEYPSQEELDAVLQTLDAFPPIVFAGEARTLEDHLAQAAMGNAFLLQGGDCAESFKEFNANNI RDTFRIILQMSVVMMFGGQMPVIKVGRMAGQFAKPRSDSFEEKNGVKLPSYRGDNINGDTFDLKSRTPDPQRMIRAYCQA AATLNLLRAFATGGYAAMQRVTQWNLDFTQQSEQGDRYRELANRVDEALGFMAAAGLTVDHPIMKTTDFWTSHECLLLPY EQSLTRLDSTSGLYYDCSAHMIWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKAGRITIITR MGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNV TECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKTRIKTQQPLAPLGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 32 | 32 | - | – | |
| MobiDBLite | 1 | 79 | 79 | - | – | |
| PANTHER | 32 | 534 | 503 | 0.0 | – | |
| PANTHER | 32 | 534 | 503 | 0.0 | ||
| MobiDBLite | 65 | 79 | 15 | - | – | |
| SUPERFAMILY | 79 | 524 | 446 | 5.71E-200 | – | |
| Pfam | 84 | 520 | 437 | 1.9E-196 | ||
| TIGRFAM | 84 | 526 | 443 | 7.1E-228 | ||
| Gene3D | 117 | 282 | 166 | 1.1E-51 | ||
| Gene3D | 283 | 525 | 243 | 1.7E-106 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | 3-deoxy-7-phosphoheptulonate synthase activity | Catalysis of the reaction: D-erythrose 4-phosphate + H(2)O + phosphoenolpyruvate = 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate + phosphate. | ||
| Biological process | Aromatic amino acid family biosynthetic process | The chemical reactions and pathways resulting in the formation of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan). |
Expression pattern of LotjaGi1g1v0143000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…