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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0143700 |
| Transcript ID | LotjaGi1g1v0143700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein yippee-like; TAIR: AT3G11230.1 Yippee family putative zinc-binding protein; Swiss-Prot: sp|Q9C777|YIPL3_ARATH Protein yippee-like At3g11230; TrEMBL-Plants: tr|A0A151T905|A0A151T905_CAJCA Protein yippee-like; Found in the gene: LotjaGi1g1v0143700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:23861616..23865047) extracted from Lotus japonicus Gifu genome v1.2.
GAACATTTTCCAAAAAATAAAACAAAAATTGGTGCGTAGTGAGCAAGTTTGTGATTCTTTTAACTTTTCAGTGCCAAAGT GCAACCGTTTGATTTCACGTTGTAATTGTATTTTAACAAACAAACAAACCCCAAATTTCATAGACCCACCACCCCTTGCA TTGCAATTGCATGAGTAACACCCACCCTTTTCAACTCTCTCTCTCACTCTCGGTAACCATTTCCTTCCATCAATCTCGTT TTCTCATTCACGTTGATTCGCCTTATTCTTATTCTACATTGCAATTTGCATGCTTCCAATTTCAATTTGGTACTGATCTT TCTATCTGGTTTCTCTTTGTTTTCAATTTCTTGTTGGGTGGTGATTTTCTGATAGGAATTTTTCTGAAGTTGACAGGTTA CTGTGTGAAGGGAAAAACATGGGAAGGCTATTCTTGATCAACCTTGAAGGAAGCTTCTACAGCTGCAAGCACTGCCTCAC TCATTTTGCTCTTGCTGATGATATCATTTCCAAGGTTCTCCACCTGCTCCCTTTTTTATTTCTTGGTGCCTCAATGTACA ACTTTCTTTAACTGTGATTCTGGATTTTCTTCTTTCTGGGTAATTGTTTGATTTATAAGTTTGTTTTTTATGCCCCTGTT GGTCAATGGTCATGAATCATGGTGAGAGTGATGATGTAATTGAAGATAGGATCAAAGGAAAATATTAAGATATATTAATA TATCACCTGTTGGGTTTAAGAGTAGCTGCATTTGTGTGAAATAGATTGGAATCCCCTGCTGTTTCAGAATAAGTGCAGGG TTTGCAGTTCTCAATCTACCTTTAAGAATTGATTAACTTCAATTTTAAAATGTTTATTATTTTATGATATAAACCAAAGG TTAAAATTCATGGAGTTGTGACTTAGGACTGTACATGTTCCTAGTCTGTGTGACACATTTTCAACACTAACACTCACAGT GGCATAGGAGAAAGGGTCAGGTATTGATTTTTCAACTGTGGAAGGATCTGCTGTTTGGACTGATTATGTGTGTCTTGGAC AGCTATAAAGTATCATTAATTTTTTTTTGGTGTGGTGGGTATTAGTTTGTAATTGTAACAATGTCAGGATAGGGTTATTT TTTCTCGGAGCAAATGATCATGTTTCTAAGTGAGAAATGTTCTTGTATAGATGGTTCTCCTAATTCATTGAGGTTGGTCC ATCATGACTTGGTAAAAAAGTGAGCTAACCCAACTTGACTTACTTTTTGATGTCACCAAATAGCCAGCTTTGCTTAAACC ACCCATGGTAGGCATGTTCAACAGGTTGGCTTACTCATATTAACAAATATTAATAATCTTATAAATGCCAAAAAAAAAGA AGAAAGTGTCATTAAAAAGATAAACATGTAGAAGAAATATAGCTAATAAGAAATTTAGTACCTAAAAAAATTGGGATTGA CTCTACAAAACTTAGGTGGAATCTACTTAACCCATGTCTCAAGTGAAGAAACTCACTTGTAACTTGGAAAAATGAGTCAA TTTTTAAAAACTCAACCCACCTTTGAACTAGGTGGAGCTGGGTTGCTCATAAACCTGAACCTAGATTGACACCTCGGTTG ATACCAGTCATGTCAAGATATGTATGAAATGAACAAACTTGAGGATGATCTGCTAGAAATACTTATATCATATTGACTAT ATATCTCAATAGAATTCTTAAGTGTTGTGATCTTTTGGTATAATTTCCTAATTTGACTTTTCTTTCATATTTGAATGGCC AGCTAAATTGTAAAAATCCTTTTCTAATTCAACATGCGTGATATCAGATACTTATCTAAACTATGGCTTCTATGTCGGTC GACGGTCAATGTATTCAAATTTCATGAATCATGAATTTATTGGACAGAATCTTTTGATTTATCTGCATATGAAATGGTAA AGGATGTCCTCTCATGAAACCATTGAGCATTAAAATTAAAGCATTCTCTGCCCTGATTATGGCACCTACTTTCTCAAAGT TTATCCTTATGTAATTTGTTGTTAAATGAGTTGAGAAATTATCAGAAAGATCAGAATTGCTGCTGGTTCACCTTACCTTT GTTGCCTATATGCATCTGAATCATTATTTGTACAATGCCTTTTGCAAACTACATGCATCAGTAAAAATTGGAACCTGCTG ATAATCTAACCCTGCTTTTTCTCTTAGTCTTTCCTTTGCAGGCATGGGAAGGCTTATCTTTTTGATAAAGTGTACGTGTC ATTTCACTTTCTTTGTACCAATTACCTTGACCCTTAATAGTGCCAATGTAGAATCTTTGAAACTGCTATGTATGTAGAAT CTTTGATATTGCTGTGTCAAAATTTAGCTTTAAACATCGGAAGAGAAAAAGAAATTGTGCCAAAATATAACCATCTCAGT ATGTTACTAGTTATGTATGATGAGACCCAGTTGTGTTTCCCGTGCTTTACTGCAATGAAGTTTCTTTTTCTATACAAAGT AAAAGATTAACTTTGTACTGAAGTTTCAACATCTGTGAAAGAAACTAATGCTTTTATGCTTGCTGTATCTTGGATACACT AATAGTGCAATTGATATAGGATGGAATCTCGATATTCATATAAGACTTGGTTTCGTAATAGTGCTTCAAATAACATATCT GTTAATCCTTGTTATGACAGTGTGAATGTCACCGCTGGCGAGAGAGAAGCACGGTTGATGCTCACAGGAATGCACATTGT TGTTGACATATTCTGTGCTGCATGTGGGTCCCTTGTTGGATGGAAATATGTAAGGACCACTATTTAAAAATGATGGTTTG TGATTTTTACCAATCTAGATGCTGCTGGCATTTGGAACATCTTTGTTTCTAATATATTTTATTTTTATTTCATTTTAGGA GGCTGCTCAGGAGATGACTCAGAAGTACAAAGAAGGAAAGTTTATTCTTGAAAGGTGACCATCTATATATGATGAGGAAT GCTTTGTAGGCTTGTAGCTTTTGAGTATTTAACTTGGGTAGCAGTGGGGATAGGAGGAGGAAGCATTCACCAATCCATAT TTTGCTGACATGTGCTTTATTATTGAGTAGGTTTAAGGTGTTGGGACCTGATGGCAGCTTCTACTTGGCAGCTCAGGAAG CTCTTGCGGGTGATGAAACTGATGCTGATGATGCTTGATTTTCTTATTTCAGGACCATATAATTTTGAATTGTACATTCT TTATGCTTCATGTTAAAATCTGCTATCTCAGTTATTAGATTTGGTATATTTGCAATAGCCCTCTATTAACATTCACAAGT TACAACAGTTACATATTTCAATTCAGATTCAAACATTTGTTTTTGCTTGTGTCTTTTCTTCATGCCTGTAAAACTAAGCA TTCATCCTACATTCGCAAGCCCTTATATCATGTCATCTTTAGTTATGTAAACATAGTTAAGAAATTAACAAT
CDS sequence (LotjaGi1g1v0143700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAGGCTATTCTTGATCAACCTTGAAGGAAGCTTCTACAGCTGCAAGCACTGCCTCACTCATTTTGCTCTTGCTGA TGATATCATTTCCAAGTCTTTCCTTTGCAGGCATGGGAAGGCTTATCTTTTTGATAAAGTTGTGAATGTCACCGCTGGCG AGAGAGAAGCACGGTTGATGCTCACAGGAATGCACATTGTTGTTGACATATTCTGTGCTGCATGTGGGTCCCTTGTTGGA TGGAAATATGAGGCTGCTCAGGAGATGACTCAGAAGTACAAAGAAGGAAAGTTTATTCTTGAAAGGTTTAAGGTGTTGGG ACCTGATGGCAGCTTCTACTTGGCAGCTCAGGAAGCTCTTGCGGGTGATGAAACTGATGCTGATGATGCTTGA
Protein sequence (LotjaGi1g1v0143700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRLFLINLEGSFYSCKHCLTHFALADDIISKSFLCRHGKAYLFDKVVNVTAGEREARLMLTGMHIVVDIFCAACGSLVG WKYEAAQEMTQKYKEGKFILERFKVLGPDGSFYLAAQEALAGDETDADDA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 129 | 129 | 2.6E-62 | – | |
| PANTHER | 1 | 129 | 129 | 2.6E-62 | ||
| ProSiteProfiles | 12 | 109 | 98 | 46.653 | ||
| Pfam | 13 | 103 | 91 | 1.4E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0143700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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