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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0147200 |
| Transcript ID | LotjaGi1g1v0147200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalose 6-phosphate phosphatase; TAIR: AT5G10100.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|F4KFG5|TPPI_ARATH Probable trehalose-phosphate phosphatase I; TrEMBL-Plants: tr|A0A0L9UYE0|A0A0L9UYE0_PHAAN Trehalose 6-phosphate phosphatase; Found in the gene: LotjaGi1g1v0147200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:25087377..25090667) extracted from Lotus japonicus Gifu genome v1.2.
TTGTGGTCCCTCCATTTTCTCATATTTGGCATAACTACAACAAACCCCTGGCTTTATTTTTGTTGTGACTTGAACAAACG AGTGTGAAAAGCGAGTTTATTTTTTTATTTTTTATTTTCTTTAATTTCTTCAAACATTTCTTTTCTCCCTATAAATAACA CCTTCAGCAGAGGAAGCAGCCACCTCTGTTCTCTGCTCTGTCTTTTCCCCTTGTTAATTCCCTTTCTTCTCATTTCTCTG CTGTTCTTTCTTCATAAGAATCAAGCTCTTGCATCACAAAATTAACATACATAGGAAATGACGAACCAGAATATGGTGAC TCAAGCTGGGAAATCATGTGTGAACAACAATAACACACTTATGGAGTTAGCAATGTCGATTTCAAACTCATGTGTTCTCC CTAGAGCAACAACAGTGCCTGAATTAATGGCTTTTCTTGGTGGGTTTTTGGGGCAACAACCAAACAAGAATAAGAAAACA TTGGAGGATGGAAAATCAGGAGGAGCCAAAGCTAACACATGGATTGATTCCATGAGAGCTTCTTCTCCTACCCGAACCAA ATCCACACAACCTTGTCACCAAAATCCTTGGACTGTAAGCATTTATTGAGAAGTCGCACATTGACTAGAGATACCGCCGA TACGGCCTATATATCATTTATATTTATGTGTTGTTCTGTTTTCTTGTTCTGTTTTTGCAGCTTTACCATCCTTCGGCGCT GGACATGTTTGATCAGATAATATATGCTTCCAAAGGGAAGCAGATTGTGACCTTTCTTGATTATGATGGAACACTATCAC CAATTGTTGCAGATCCAGATAAAGCATACATGAGTAAAAAGGTTTGTCTTTTGTTTCACTCTTTGTTTCTATCTCTCATA TCAATTCAATTCATAAAAGAAAATGGAATATATAATTTCCTTTAATTATAATTGCAATTGATTTACTTTTGAATTAATCA GATGAGAGCGACATTGGAGGACATAGCAAGGCATTTCCCCACAGCCATTGTTAGTGGAAGATGCATAGACAAGGTACATT TATTATTTTTTTCATAGAAAATTTGCAAAAGGAAATTAAAATATATGAAAAAGGTTATCATCTTTTTTTGCATATAACTA ATTATTTTTTTTAATAAAACATTTCAGGTTTATAATTTTGTGAAATTGGGGGAACTATACTATGCTGGAAGCCATGGCAT GGACATCAAGGGACCATCAAATAGCCGAAGCACTAAGAATGTGAGAAATAATTTCTCTAACCAAATTAATGTGTGATGAT GATTTTTGTTTTTATCTTGTTGTTTTTTATGCTTATCTTGGTAATTTCTTGTTTGCCTTCAGGGTAATGATGAAGGGGTA CTTTTGCAGCCTGCAAATGAGTTCCTGCCCATGATCAGTGAGGTTCGTTTCTTTTAAATTAATACCATATAATTGAATAC TCTCTATTCTCATTATAAAAAAGATTTTTCACACCTATATCACTATTTTGGCCAGAAGAAGAATATAGCATTCGATTTCA CAGATTTGTTTTTCTTATAATTTTTTTTCCAATTCATTTTCACAGATTTGTTTTTCTTTTTTCATCACATCAGAAATCAT ATCTTTTATTACCTCTCCTCTATAATTATTTCTATGAAGGTGGAGGGTAGATTTCGAGTGTGAATAAACTATTTTTAAAA AAAAATCCAATTTTACTTTTCTCACTGTGGTACATACAATTTTAACTCAGCTAATAATTATTATTCTTTTGTTTTCTTCA GGTGTACAAGATCTTGGTTGAAAAAACAAAGTCTGTCCCAGGAGCTAAAGTAGAAAATAACAAGTTTTGCTTATCTGTGC ATTTTCGCTGCGTTGATGAGAAGGTATGATCAGTTAGTCAACAAAAATATTTAATGTGAGCTAACATACACACCCACACC ACACACAACACATTAATATGGATGGTTCATAGTAGTGACATTATTTTAATCAATTTTAGATTAATACTATTATTTTCATT TATATCTAACCATATTATACTTCTTGTTCTTATATATAGAGTTGGGTGCCATTGGCGGAGCAAGTTAGCTCAGTGCTCAA TAAATACCCAAAGCTCAAGCTAACACAAGGAAGAAAAGTGTTGGAGATTCGACCAAGCATAAAATGGGACAAGGGCAAGG CTCTTGAATTCTTGCTAAAGTCGCTAGGTAACTATTATATGTTCATGCTAAAATATTTTTTCTTTAATTTGTACGTATCT CATGAGAAATTGTGTATCCTAACTTTAGACTCTTTGTTCTTTTTTAGGATACGCAGATTCTAGTAAAGTATTCCCAATCT ATATTGGTGATGATCGAACTGATGAAGATGCATTTAAGGTAACATATGCCACCACCTTACTCTAGCTTGTAAATTGTTAA AATTACATATTGTACTGTTTTATATACTCCACATATATTATCAATATTATAATTATTATACTAACTTTGGATGTATAAAA AATAAAAGGTGTTGCGCAATAGGGGCCAAGGGGTTGGGATTCTTGTTTCTAAAACTCCTAAAGAGACAGACGCATCCTAC ACTTTGCAAGATCCATCAGAGGTGAGTCCAATATTTCTCAGTCTTCAAATGTTATTTGGTTCAAGCATTAATCATTATTT TTTTTCAAATTAAAATGATATCTATAGTTAAGGCTTATATGAACATTGTTTTTCTGTATTTTTTCAGGTTGGAAAATTTT TGCGGCATTTGGTGGAGTGGAAAAGAACGAGTTCTAACTTCCACAAGTTATAGATTCTAGAATTGACACTGACCCAGAAT TTGGTCAAGGAGTGGTTCTGTAGAGGGATTCCAATTGCATCCCTTAATTTAATTTCTTGTTGAAAATAGGAAAAAGTGAT GTTCCATAATTTAATCTTTGAGGGGAGGACGAAGTCCAAACTATAGATTAACTTTTCTTTCTTTCTTTTTGTGTATTTTT TTCTTTCTTCAAAGATGTATTCTATTCTTTCACACGTTTGCATGCGCATGCGGATAGTGAAAGACAGATGTTTTATGCCG CAGTTTCAATAGGCAAATCAGCTTTATTGCTCCCAATTGTACTTATTGTACGTGTGGACAATGTAATACTGAAAATGAAA ATCACCAACTTAAACTTGGAAAGCTGATTTAGACTATCATAAATACAAAATAGTTTGTGTACAAGATGATATTTGTTGAG CCCCACAATAATTAGGGGATAGTTGAAATAGGGGAGTATGAAGACTTTGATAATTTGCTTCTTACTAGATTTTGTAATTG ATTTAGACATA
CDS sequence (LotjaGi1g1v0147200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGAACCAGAATATGGTGACTCAAGCTGGGAAATCATGTGTGAACAACAATAACACACTTATGGAGTTAGCAATGTC GATTTCAAACTCATGTGTTCTCCCTAGAGCAACAACAGTGCCTGAATTAATGGCTTTTCTTGGTGGGTTTTTGGGGCAAC AACCAAACAAGAATAAGAAAACATTGGAGGATGGAAAATCAGGAGGAGCCAAAGCTAACACATGGATTGATTCCATGAGA GCTTCTTCTCCTACCCGAACCAAATCCACACAACCTTGTCACCAAAATCCTTGGACTCTTTACCATCCTTCGGCGCTGGA CATGTTTGATCAGATAATATATGCTTCCAAAGGGAAGCAGATTGTGACCTTTCTTGATTATGATGGAACACTATCACCAA TTGTTGCAGATCCAGATAAAGCATACATGAGTAAAAAGATGAGAGCGACATTGGAGGACATAGCAAGGCATTTCCCCACA GCCATTGTTAGTGGAAGATGCATAGACAAGGTTTATAATTTTGTGAAATTGGGGGAACTATACTATGCTGGAAGCCATGG CATGGACATCAAGGGACCATCAAATAGCCGAAGCACTAAGAATGGTAATGATGAAGGGGTACTTTTGCAGCCTGCAAATG AGTTCCTGCCCATGATCAGTGAGGTGTACAAGATCTTGGTTGAAAAAACAAAGTCTGTCCCAGGAGCTAAAGTAGAAAAT AACAAGTTTTGCTTATCTGTGCATTTTCGCTGCGTTGATGAGAAGAGTTGGGTGCCATTGGCGGAGCAAGTTAGCTCAGT GCTCAATAAATACCCAAAGCTCAAGCTAACACAAGGAAGAAAAGTGTTGGAGATTCGACCAAGCATAAAATGGGACAAGG GCAAGGCTCTTGAATTCTTGCTAAAGTCGCTAGGATACGCAGATTCTAGTAAAGTATTCCCAATCTATATTGGTGATGAT CGAACTGATGAAGATGCATTTAAGGTGTTGCGCAATAGGGGCCAAGGGGTTGGGATTCTTGTTTCTAAAACTCCTAAAGA GACAGACGCATCCTACACTTTGCAAGATCCATCAGAGGTTGGAAAATTTTTGCGGCATTTGGTGGAGTGGAAAAGAACGA GTTCTAACTTCCACAAGTTATAG
Protein sequence (LotjaGi1g1v0147200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTNQNMVTQAGKSCVNNNNTLMELAMSISNSCVLPRATTVPELMAFLGGFLGQQPNKNKKTLEDGKSGGAKANTWIDSMR ASSPTRTKSTQPCHQNPWTLYHPSALDMFDQIIYASKGKQIVTFLDYDGTLSPIVADPDKAYMSKKMRATLEDIARHFPT AIVSGRCIDKVYNFVKLGELYYAGSHGMDIKGPSNSRSTKNGNDEGVLLQPANEFLPMISEVYKILVEKTKSVPGAKVEN NKFCLSVHFRCVDEKSWVPLAEQVSSVLNKYPKLKLTQGRKVLEIRPSIKWDKGKALEFLLKSLGYADSSKVFPIYIGDD RTDEDAFKVLRNRGQGVGILVSKTPKETDASYTLQDPSEVGKFLRHLVEWKRTSSNFHKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 380 | 380 | 3.2E-210 | – | |
| PANTHER | 1 | 380 | 380 | 3.2E-210 | – | |
| TIGRFAM | 119 | 368 | 250 | 1.6E-49 | ||
| CDD | 124 | 362 | 239 | 2.02726E-66 | – | |
| Pfam | 124 | 358 | 235 | 8.6E-78 | ||
| TIGRFAM | 124 | 332 | 209 | 1.7E-19 | ||
| Gene3D | 124 | 354 | 231 | 1.6E-46 | ||
| SUPERFAMILY | 124 | 371 | 248 | 9.78E-47 | ||
| Gene3D | 203 | 288 | 86 | 1.6E-46 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi1g1v0147200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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