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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0149100 |
| Transcript ID | LotjaGi1g1v0149100.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sulfate transporter 1; TAIR: AT1G22150.1 sulfate transporter 1;3; Swiss-Prot: sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3; TrEMBL-Plants: tr|G7KA24|G7KA24_MEDTR High affinity sulfate transporter; Found in the gene: LotjaGi1g1v0149100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:25549294..25553142) extracted from Lotus japonicus Gifu genome v1.2.
GTACTGCAGTTAAACTATTTCCACCACTTGTTCATGGACATAACATTTTTCAATGTATTACAGTAAAAGTCATTGTTGAT GTCCTCAATGGGACATCCAGGTGATGAGAATCTTGAAACAAAAGAGATGGACGCGAGAAGTTTGTCATCTTCACATGGCC AGGAACCGTACGTGCACAAGGTTGGAATTCCTCCAAGACAAAACCTCTTCAAGGAATTCCAATCCACTGTGAAAGAAACA TTCTTCTCAGACGATCCTCTACGGTCCTTCAAGGATCAGTCGAAGTCGCGGAAGTGTATCCTCGGCATTGAAGCCATATT CCCTATACTTAGTTGGGGGAGAACTTACACCCTCAAAAAATTTAGAGGGGATCTCATTGCTGGTCTAACTATTGCAAGTC TCTGCATTCCTCAGGTAAATTTGCTTTGAAATGTTGATTTTGAGATCTTGAAGATTACTGTGAGTAAAGAACTATACTTC TTATTACATAGATTTTAATATCTGGCTTGTAAAAACAGGATATTGGATATGCAAAGCTTGCGAATTTGGCTCCACAGTAC GGATTGTGTAAGACTCTTGTCTCTGAAGAACAGGTTAAGTTGCTCATATGCTTTCTTTAGATGTTGGACTGAGATTTTGT TGCATTTTCTTCTTCCTTTTACAGATTCCAGCCTTGTTCCACCACTGATTTACTCTCTCATGGGTAGTTCTCGTGACATT GCAATAGGACCGGTGGCAGTGGTTTCTCTCTTGTTGGGGACTTTACTTCAGAATGAGATTGATCCCGTTGCGAATCCAGA AGACTATAGACGACTCGCTTTTACTGCCACATTTTTTGCTGGAATCACTCAAGCAATACTTGGGGTTTGTAGGTATGAAT GACACTTTGATTCTAGGGGAGTTTGCATTTGAATCTTCATAGCTGATAGTAGTGTTTATGCATTGCCCTGCACTCGTGCT ACCAAATTCCAATGTAATGCTTCATTGTTTATACAATATGATGACATTCTGGTTGGGTGGATCTTTTTATCAGGTTAGGA TTTTTGATTGATTTCCTATCTCATGCTGCAATTGTCGGTTTTATGGGGGGAGCTGCCATCACCATTGCACTTCAACAGCT TAAAGGTTTCCTTGGGATTCAAAAGTTCACAAAGAAAACTGATATCATCTCTGTGATGAATTCAGTATTCTCAACAGCCC ATCATGGAGTATGCTTTCTCATTTCTATATCTACTGTACCTGCCGTTAGGAAATTCCTAAATTTATGCAGTTAAGGAATC TAAGCCATCGGACGACTCAAATTTTAAGCTTATATCTGTCATATGATCTTGATGAAATATATGAGCCGACTCATCTTTGA TCGAAGGATTCGGATTCCTTAACTGCGCGAATGTAGGACTGCCCTGACTACAGAGAACTTAAATCCGGGGACTTTATTTT GAAGATATGTGTTTGTCCGCACACTAAAGCTGATAAATATCTAACATTTTTCAGTGGAACTGGCAAACTATAGTAATTGG AGCCACCTTTCTGGCTTTTCTTCTGTTGGCCAAGTATATTGTAAGCACTCTAATTCATTTTATCATATATTCCTTAGACA GAATATTGGGATTGTGAATTGTTTTCTCATTATATTATGATATGTGGATCAGGGAAAGAAGAAGCAGAAATTCTTCTGGG TGCCAGCTATTGCCCCATTGATATCTGTCGTACTCTCCACATTTTTTGTATACATAACTCATGCGGACAAGCACGGTGTT GCGATTGTAAGTATAAATATTGGCATTTTCATCCTGAACATTGTAGACGATTGTGTTTGGATTTCTGTTCCATTCACCTA AAAACACTTTCATCCCAATCCATTAGGAGACATGGATTTCTGTTGAAAGTCTATTTAAGATTTGCTAAATATTACTAATT GTAGCAATATAGTAAAGCTTTGTCTATTGATACGTGAAGGTAAAACACATAGAGAAAGGGCTCAACCCTTCATCAGTGAA GGAAATTTTTTGGAGCGGTGTTTACCTCGGGAAAGGTGTTAGAATTGGCATCGTGGCTGGCATGATCGCATTGACTGTAA GCAAACTTTGACAAAATTATCTTCATATGGAGAAGTTTACCATTTGTGTTTTTTAATTGTTATAAACTGTTACATTTTGT TTATCAGGAAGCCACAGCAATTGGAAGAACGTTTGCTTCTATGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTTG CGTTAGGAGCTATGAATGTTGTTGGTTCAATGACTTCTTGTTATGTAGCGACCGGTAAGCTCGAAGAGATGTTATATGAA CCTTGCTTTCTTTTGTCATCAGCTGCAACTGTTAGAAAGATGTAATAGATGGTTATATCTGTGATGAAATATAAGTTAAA GCATTTTCTTTAGGTTGTAGAAACAATACTAAAAAGAGGGGAAACTCTGAGCAGTTAATAGATCTGAATGAACAAGAAGG GAAGTTACTTTTATATCTATTTAGCTGAATTTATTAAATTTCAACCTTTCTCAAACAACCTCCTCAACTTGTTTTCTCTT CAATCACTTAACCCCCTTCAACTTTGGTTTAAGTTGAAATATTTTACCTTTGATTTAACTTTAACATCAGTTTAACATTT TCTCTGCTTACCCGCAAAATTTTCTTTAGGAGGGTAACATGTAAAAGACTAAACAACAACTTTAAGGGGTAGGTTGAGCA AGTATTAAGAGTGAACCCTCAAATTCGTCTCTGAAAGATATAGCGCAGGGTCCCTGATTGTGTCAAATGTCGGTCAAGTT GTCCCTTCATCACGCTTGATCCACTACCGTTCAGGGACTTTTAAAGTGATGGAGGGACCAACTTGACCGACAATTGACAC ATTCAAGGACTTTTGAAGTTATTTCCTTTTTCAGAGACTAACTTGTCCGATGCTGTATATCTTTCAGGGACGAATTTGAG AGTCCACTTAATTATTAAACCATGACAAGGAATGTGCATTATAAGTAATACTTGATGTTAAAGTAAATTCAAAGGCTAAT ATTTAGTTTAAACCAAAGTTGAAGGGGGTGAAAATGGAGGTGTGAAATTTAGTTCACCTTAATCATATTACAGTAGCTTG CTTCATATTTAATCAAGGGAATGCATGTAAACTGGGTTATGAACTAATATTTTACAGCCTCTGATCTTCCTTTTGCTATA CTCAGGTTCTTTCTCTCGATCAGCTGTGAATTACATGTCCGGCTGCCAAACTGCAGTGTCTAATATTGTCATGTCCTTTG TTGTGTTCTTAACCCTGCTATTCATCACACCTCTTTTCAAATACACTCCAAATGCCATTCTTGCTTCAATTATCATTTCT GCTGTCATAAACCTTGTGGACTACAAGGCAGCAATTTTGATATGGAAGGTCGATAAATTTGACTTCGTCGCTTGCGTGGG AGCATTTTTCGGGGTTGTTTTCGCCTCGGTTGAGATAGGGCTTCTGATTGCTGTAAGTATTAAAAGTTTAAAACTAGTTA TCTTTATATAATTGGTGGTTTTTAGGTTTTTTTTTTCGGAAATTTGTGTTTTGAGTTATGAAGTCTCACATTGGTTAGAA GTGGGTTAAGCGAGGACAACTTAACTAACAAGTTATTGTTACACTTTGTGGTAGGTCTCTATATCCTTCGCAAAGATCCT ATTACAGGTAACAAGGCCGCGAACTGCTATTCTGGGGAAGATTCCTAGGACAACTGTATATAGAAACATCCAACAATACC CAGAGGCCACGAGCGTTCCTGGTGTACTAATTATAAGGGTTGATTCTGCAATATATTTTTCCAACTCAAATTATGTTAGA GAAAGGTAA
CDS sequence (LotjaGi1g1v0149100.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTCAATGGGACATCCAGGTGATGAGAATCTTGAAACAAAAGAGATGGACGCGAGAAGTTTGTCATCTTCACATGG CCAGGAACCGTACGTGCACAAGGTTGGAATTCCTCCAAGACAAAACCTCTTCAAGGAATTCCAATCCACTGTGAAAGAAA CATTCTTCTCAGACGATCCTCTACGGTCCTTCAAGGATCAGTCGAAGTCGCGGAAGTGTATCCTCGGCATTGAAGCCATA TTCCCTATACTTAGTTGGGGGAGAACTTACACCCTCAAAAAATTTAGAGGGGATCTCATTGCTGGTCTAACTATTGCAAG TCTCTGCATTCCTCAGGATATTGGATATGCAAAGCTTGCGAATTTGGCTCCACAGTACGGATTGTATTCCAGCCTTGTTC CACCACTGATTTACTCTCTCATGGGTAGTTCTCGTGACATTGCAATAGGACCGGTGGCAGTGGTTTCTCTCTTGTTGGGG ACTTTACTTCAGAATGAGATTGATCCCGTTGCGAATCCAGAAGACTATAGACGACTCGCTTTTACTGCCACATTTTTTGC TGGAATCACTCAAGCAATACTTGGGGTTTGTAGGTTAGGATTTTTGATTGATTTCCTATCTCATGCTGCAATTGTCGGTT TTATGGGGGGAGCTGCCATCACCATTGCACTTCAACAGCTTAAAGGTTTCCTTGGGATTCAAAAGTTCACAAAGAAAACT GATATCATCTCTGTGATGAATTCAGTATTCTCAACAGCCCATCATGGATGGAACTGGCAAACTATAGTAATTGGAGCCAC CTTTCTGGCTTTTCTTCTGTTGGCCAAGTATATTGGAAAGAAGAAGCAGAAATTCTTCTGGGTGCCAGCTATTGCCCCAT TGATATCTGTCGTACTCTCCACATTTTTTGTATACATAACTCATGCGGACAAGCACGGTGTTGCGATTGTAAAACACATA GAGAAAGGGCTCAACCCTTCATCAGTGAAGGAAATTTTTTGGAGCGGTGTTTACCTCGGGAAAGGTGTTAGAATTGGCAT CGTGGCTGGCATGATCGCATTGACTGAAGCCACAGCAATTGGAAGAACGTTTGCTTCTATGAAGGACTATCAACTGGATG GAAACAAAGAAATGGTTGCGTTAGGAGCTATGAATGTTGTTGGTTCAATGACTTCTTGTTATGTAGCGACCGGTTCTTTC TCTCGATCAGCTGTGAATTACATGTCCGGCTGCCAAACTGCAGTGTCTAATATTGTCATGTCCTTTGTTGTGTTCTTAAC CCTGCTATTCATCACACCTCTTTTCAAATACACTCCAAATGCCATTCTTGCTTCAATTATCATTTCTGCTGTCATAAACC TTGTGGACTACAAGGCAGCAATTTTGATATGGAAGGTCGATAAATTTGACTTCGTCGCTTGCGTGGGAGCATTTTTCGGG GTTGTTTTCGCCTCGGTTGAGATAGGGCTTCTGATTGCTGTCTCTATATCCTTCGCAAAGATCCTATTACAGGTAACAAG GCCGCGAACTGCTATTCTGGGGAAGATTCCTAGGACAACTGTATATAGAAACATCCAACAATACCCAGAGGCCACGAGCG TTCCTGGTGTACTAATTATAAGGGTTGATTCTGCAATATATTTTTCCAACTCAAATTATGTTAGAGAAAGGTAA
Protein sequence (LotjaGi1g1v0149100.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSMGHPGDENLETKEMDARSLSSSHGQEPYVHKVGIPPRQNLFKEFQSTVKETFFSDDPLRSFKDQSKSRKCILGIEAI FPILSWGRTYTLKKFRGDLIAGLTIASLCIPQDIGYAKLANLAPQYGLYSSLVPPLIYSLMGSSRDIAIGPVAVVSLLLG TLLQNEIDPVANPEDYRRLAFTATFFAGITQAILGVCRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIQKFTKKT DIISVMNSVFSTAHHGWNWQTIVIGATFLAFLLLAKYIGKKKQKFFWVPAIAPLISVVLSTFFVYITHADKHGVAIVKHI EKGLNPSSVKEIFWSGVYLGKGVRIGIVAGMIALTEATAIGRTFASMKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSF SRSAVNYMSGCQTAVSNIVMSFVVFLTLLFITPLFKYTPNAILASIIISAVINLVDYKAAILIWKVDKFDFVACVGAFFG VVFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEATSVPGVLIIRVDSAIYFSNSNYVRER
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 32 | 32 | - | – | |
| Phobius | 1 | 146 | 146 | - | – | |
| PANTHER | 21 | 557 | 537 | 0.0 | ||
| PANTHER | 21 | 557 | 537 | 0.0 | – | |
| TIGRFAM | 82 | 556 | 475 | 2.0E-189 | ||
| Pfam | 95 | 475 | 381 | 6.1E-130 | ||
| ProSitePatterns | 124 | 145 | 22 | - | ||
| Phobius | 147 | 164 | 18 | - | – | |
| Phobius | 165 | 175 | 11 | - | – | |
| Phobius | 176 | 194 | 19 | - | – | |
| TMHMM | 180 | 202 | 23 | - | – | |
| Phobius | 195 | 200 | 6 | - | – | |
| Phobius | 201 | 224 | 24 | - | – | |
| TMHMM | 205 | 227 | 23 | - | – | |
| Phobius | 225 | 256 | 32 | - | – | |
| TMHMM | 256 | 278 | 23 | - | – | |
| Phobius | 257 | 278 | 22 | - | – | |
| Phobius | 279 | 284 | 6 | - | – | |
| TMHMM | 285 | 307 | 23 | - | – | |
| Phobius | 285 | 306 | 22 | - | – | |
| Phobius | 307 | 342 | 36 | - | – | |
| Phobius | 343 | 365 | 23 | - | – | |
| TMHMM | 343 | 365 | 23 | - | – | |
| Phobius | 366 | 376 | 11 | - | – | |
| Phobius | 377 | 397 | 21 | - | – | |
| TMHMM | 378 | 400 | 23 | - | – | |
| Phobius | 398 | 416 | 19 | - | – | |
| TMHMM | 413 | 435 | 23 | - | – | |
| Phobius | 417 | 435 | 19 | - | – | |
| Phobius | 436 | 441 | 6 | - | – | |
| Phobius | 442 | 464 | 23 | - | – | |
| TMHMM | 442 | 464 | 23 | - | – | |
| Phobius | 465 | 475 | 11 | - | – | |
| Phobius | 476 | 499 | 24 | - | – | |
| TMHMM | 477 | 499 | 23 | - | – | |
| Phobius | 500 | 557 | 58 | - | – | |
| Gene3D | 507 | 557 | 51 | 1.7E-14 | ||
| ProSiteProfiles | 527 | 557 | 31 | 10.544 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Secondary active sulfate transmembrane transporter activity | Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
| Biological process | Sulfate transport | The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Sulfate transmembrane transporter activity | Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0149100.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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