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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0152800 |
| Transcript ID | LotjaGi1g1v0152800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box protein family; TAIR: AT3G16210.1 F-box family protein; Swiss-Prot: sp|Q9LU24|FB145_ARATH Putative F-box protein At3g16210; TrEMBL-Plants: tr|G7LFI2|G7LFI2_MEDTR F-box protein interaction domain protein; Found in the gene: LotjaGi1g1v0152800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:26552901..26561204) extracted from Lotus japonicus Gifu genome v1.2.
GTGAGGGTTTCCCCTGCTTCCGCTCAATCGAGAGAAGTTAAAGCTCTGGCCCCTTCAACAATGGCGATTCCTGATGATGT CGCCTTCACGATTCTGTCGAAACTGCCTCTGAAATCTCTCAAGCGATTCACACTGGTTCACAAATCATGGGTTGATTTAC ATGAAATCCCTTATTTCATGAGCATGTTTCGCAGCAATTTCTTATCCAAACATCAATCTTATTACGATGATACATCTCTC CTTGTCTTACAGCAGCAGCCATCAGATGGCACCCATTGTCACGGTTCATTGTTTTTGCTTTCTGGTGACAATTTTGAGAA AACAGTCAAATCAGATTGGCTTCCATATCAAGAACATGGCAGATTCCTTAGTGTTTTGGGTTCGGGTATTCATGGCATTC TTTGTCTCCATGAAGCACCAGATTATAAGTATGTATTGTGGAACCCAGCTACTGAAGAATTCAGAGTTACTCCTCCCAGC CCTAGAGAGTCTCTACCTTATTGGGAGGCTTATATTAAACCTCATGGATTTGGTTATGATCCTATTACTGATGACTTTAA GGTCCTTCGGCATATAACTTTTTATCCAGATTATGATTATGGGCAAGATGAATATCATTCGGGAGTTGAAGATGATAATG ATGATGACGATGATGAAGATGATGATCTGCAAGATGAGCCAATGATCTCAGACCACTTACCAAGTCGAATACCACAACCC TTCTGGGAGATATATAGCCTAAGAAGCAACTCTTGGAGGAAACTTGATGCTGATATGCCTATTACTGGAGGCGGTCCCGA CAAGGGTGGTGACACTTACATGAATGGAGTGTGTAATTGGTTGAGTTACGGTCGGATATATGACTATGGTTTTGATACAC ATTTGGTGTCATTCAACTTTAGCAATGAGATATTCTACACAACGCCCTTACCGTTAGATCTGGCTGATACAAGGGTGCAG ACATACTTGGCGGTGTTAAATGAGTCCATTGCGTTGATATCAATGCATGAAGAAACAACAACTTTTCACATATCCATTTT GGGTGAACAAGGTGTGAAGGAATCATGGACTAAACTTTTCATTGTTGGACTTGGACCCTTGCATGACGTTGGGCTTCCTA TTGCAGTAGGGAAGACGGGTGAAATGATATTCTCCAGAAGAGAAAAGGGTGAACTAGCCTTGTTTGATTTAAGTACCCAG ATGCTCAAGAAGGAGATTGCTGCTACAGGGCTGTTAGATTATGATCAGATGGTAATTTATAAGGAAAGCATTCTTCCCAT TGGGAGAACAGGTTATTAGTATAAGCTTAAAGCTTTACTCATTAGATTTATGATGATGGCTATTAAGATTTATTACCACA TTGAATGTTAAGAAGTCATTTGTGTACAAATTGGCTCTTCAATTGCCCATATATATCAAATATATGAGAAAGAAGCCATT TCGTCATATGATTCTTGATGTATCAATTTTATTTTGATGCATTACTCTCTTACCATTTGTTGCATACTGTTTTCTATTTC AGTTGTCAATTGTAAAAATGCATAATCTCCTTCACTTTGCATCTCTTACATATAGTTAGGTAGGTGGAGTTCAATTTTTT GGCCTTTTGTTTTGTAATTTAAGAAGCTGAAGGCGACGATAGAGCATTTGTTGAATGGTGATGCAGTCGCTGTGCAAAGA TTGGGCGATTAGTGAAGGTTATAAAATCTCTCTTTTTCTACTACTTTCGTATTTGCCTTAGCAGATGATTCATTCTCCTT TTGCAGTATATATTGTGGATAATGTGTATAGTATCTAGTTTCTTACATGCTAACATCTTGTTCCCAATTTTTGAAAAGTA CATGAGCTACACGTTCTATGTTATGTTCTTGAAAAGTATATATAGTTTTTTATTTTGGTGGTAAATTTCCGTTAACCCAT ATCTTAGACCCTCTGTTCTTGATATGCCCCCAATGTTTTACTTTTTCTTGCCTTCCTCACTGGATATGAAATTATAGTAT ACTGGCATACTATTATATTCCAATTCATGTTGGAAGGACACTACTAATAAGTAATAACTGTTGCATTTTAACTTCCATTA TAAGGAGCTTTTCTTGATAGATTGTGAACCAAATCTGTAAAATCTTACAATACTTGAAAGGCAAGTTATCTGTTTTCTAT GTTGTTAATTGCCGCAATTACCATGCTGAACTAAGCTTTTGCATTCTCCATGTGGTTTTCATTCTTATTCTTCAATTTAC AAAATAGAGTTTCTTTGTTTTATGTGTCAACGATTTATGGTTACGTTTGATGCATGTCCTCGAATTAAGGTTCTGTATAC ACAGGTGTAATTTTTGTATGAGGTAGTGTGGTGTCCCTGTCATCAGGAGTTATTCGGCTATATTAGCTAGTCCAAAGCTG GAGTCACATGGCATGCTGCAAAGTATTGATTAACATGTCTTCTCTTAATAGATAATTAGATACTGTATAATTCAATAAAA TTGAAAATTTAATGCTTGTTGTCATGTTACTCATGTGACTTAAAATTTGAAGCTAAGTTTGGATTTTGAAAATTTAACTA AGGAGCTGATTGAATTGGTCTCTCTTCAAGATGTTAAAATAACCTTTATCAATCTATCAATATCTGATAGACTCATACAA ATACATAAAGAGAAAGCAAGTAGAAAAGGTGCCAATCCTGCCATTTAAAGAATAAAGAAAAACTTGCTGATAGCATGAGA TGGCAGCTGAGGAGATGAGGTGCTGTCATATATCGGTACCAGCTACGATTAGTTTAATAGGGTATGGAGCAATTCAGTCA TAAGGGAGTGGAATAAGATTTGCTGATTGAAATATTATGACTGGGTTTTTTCGTTATAAAATGTGCAATGACTTAGCACT TGATGGCAATCAGGTGATGTATCTGAGAGGAATGTCACTAGGGAGAAGGAAAGACAAAGTGTGTTTCTCCTAGCTACATG GTGGTGTGAATTTACTAGGATATGTGTCATGAAGTGTCAAGGGCTGGTCTTTTTAGGATTAATCTAATCAGCAAATGGAG TGCTTCTTTGAGTGAGAATCAGAAGGTGTGTGTGCGGAAAATTGTAATTGGGTGCTGATGTGGAGGGGGGGGGGGGTTGA AAGATTAGTTTGTTAGTATAGAAGATGGTGCCAAAATCCGCAATAGCGCTATAGCATGTAGCGCTATGGCCGCTACGCTG AAGGAGGAGGAGGAAGAAGGAGGAGGAGGAAGGAGGAAGAATGGAGGAGCAGATCTCAGTTTTCATCGTGAAAAACAGAG ATGAAAACAGAGGAGAACGCAGAGGCAGAGGTTGAAGAAGGTTCAAAACGCAGCGTTCCAATTAAAAATGTGAAAGTCCC ATAATACCCTTTAAAAGTAAGAAATAATGTTTAAATCGGGGGGCATTTTGGGGTTTTCGCATTGAACAGTAGGGTTCTTA TCTACACATGAAACGCTGCGTTTCATTAAAAGAACGGAAAACCCCAAAATGCCCTTAAAATGTTTAACCTAATGTTTAAA TGTGAGGGTATTTTAGGGTTTTCAAGCCTGAACATTAGGGTTTTTGTCCCTCTTTCTTCCTCGGGCCGCTGTTGCGCCGT TCAAGACGCGATTTTGGCCGCGATCGCGGCCGCTACCGCCGCTACGCGGTTTTCGCTCCGCGACAGCCTCCAGCGTCGCG GCCAACCCCTGATCCGCCACGCTCCGCCGCTATAGCGCTGCTATATCCCGCTATTGACAACCCTGAAGCATATATAAATC TCTCACTGTGAGCCTTGACAATTTTTCTGATATTCCCTGGTATCATATATATAACTAATTCTACCTCATAAACAGTAAGC CTAGTGCACATGATTAATTGGGCATGAGTTGATTTGTTCTTTGTCGGTTGGGCTGCCCATTTGAGAAACTTATAGAAAAC AAGCTTTCTTATCCCAATGTAAAATTTTGAGTGCAATTGCTGGCTGTTGTATTTTGATGGTAATATATGCGGTACAAAAT ATGGGATATCCATATTTTCATTAGACTTGTGATGATGGTTATTAAGATTTATTACCATATTGAATGTTAAGAAGTCATTT GTATACAAGTTAGCGATTCAATTGCCCATATCTTATATACCATCAAATATTGAGAAAGAAATCATTTGGTAATATGATTC TTTGATTTATCAATTTTATTTTGATGCATTACTCTCTTTCCATATGCGTACTGTTTTCTATGTCAGTTGTCAATTGTAAA AATGATCTTTTATCTTTTTGTGAATTACACCATCTTATTTTTCATTTTTGGTTAGAAAGTGTAGAAAACCATGATAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACCAGAAAATATTCAACTGTATTGTACT ATTGTGTAATCATTTCTGGGTATTAAAACTGAGAACAGGTGAACTTCATATAGAAAGCTTAATGCTTACTGTTCCCTGAA CTAACTATAACAACTGTAACAGATTCTAACTAGGTCTGACAGCTGTTAAGAACTGAATAACAGCTGTACAGAGGGATACT ATCTAGTGTAGCAGGTTGTATGATACACCATACTCCTGCTCACTCCATATATTCCTATATTCCCCCCTCAAGCTCATCCG GGTGTATAAGGAGTCCTTGCTCAGCCTTACTAAGGACACACAGTGAGCTTGTTTCATAGTTCCTGAAATCTGAAGGGACT CAAAGGCTTTGTTAAAGCATCTGCAATCTGGAACTCTGCTGGAATATGCTGCACAGCAAGCTGTTTGGCCAGTACTTTTT TTTCTGACAAACAATAGGTCAATTTCCTCGTGTTTTGTTCTTGAATGGAGCACTGGATTATGTGCAAGCAAAACTGCCCC ATGATTATCACAATACAAAACTGGGGTTGAAAATGAAACATGTAATTCTTGAAGTAAGGATTGAATCCACAAGAGATCAG CTGTAACTTTTACTAAGCTTCTATATATTCTGCTTCTGCGCTGCTGCGAGCTACTACAATCTACTTTTTGGACCACCAGG TGATGATATTGGGCCCAAAATAGACACAAGCTCCACCAGCTGATCTTCTGTCATCAGGGTCTGTGGCCCAATCAGAATCA CAGAGGCCTCTAACAGAGATAGAAGGAGTTGTTGCAGGCTGTAGAAGAAGCCCATGTAGAAGAGTACCCTTGAGATATCT CAAGATTCGTTTTACAGCAGCCCAGATGTCGAGAGGAGCACTCATAAACTGGCAGACCTTATTAACTGAAAAACTATGTT GAGGTCTGGTAATGGTAAGGTACTGGAGAGCACCAACAATGGATCTGTATAGAGATGGATCAGAAAAAAGGAGACCCAGC AGTCTTGGTAAGCCTTGCTAATGTCACAATAGGAGAGGAAATAGGCTTGCAGTCAACCATATTTGCCATGTGCAACAAAT CTCGGATATACTTGCTCTGAAGAAGGCATTAGAGAACCATTAGAAAGATGCTTGACATAAATACCAAGAAACTAATCAAG CTGACCAAGTTGTTCAAGGAAAAGGCATCATTCAACTGAATCATAAACAGTTGTATATGAGTGGGTGAGAGTTCCTTGCG ATGATACTTTCGTCAACATAAACAAGAAGATATAAAATGACTGAGGAATGAGAGTAGATAAAAAGAGAGGTATCACATTT ACTCCCAACAAAACAATTCTGCAGTAACACAGTTTTCAGTCTATCAAACCAGGGCCTTAGGGCCTGTTTTAAACCATACA AGGCTTTGTTAAGCCTGCAAACCAATGATTTATCATGGTGCTCAAACCCCGGAGGTTGCACCATATACACCTCCTCTTCC AACAAGACATTGAAGAAGGCATTGTTGACATCAATCTGCTGCAAAGGCCTTCCAAAAGTCAAAGCTAGGGCAAGAATAAT ACGAATAGTGACAGGCTTGATAACAGGTGAAAATGTTTCTGTATAGTTAAAATCAGGCTGTTAATGTAAGCCCTTAGCAA CCAGCCTGGCTTTCAGCTTATTAATGCTACCATCTGCATTTTCTTTGACCCAAAATACCCACTTTCCTATTAGGGGGGAA TAGGACTAAACTCCAGGTCTGGTTTCTTAGTAGAGCCTCATACTCTTCAGTCATAGGCTGCTTCCATTCAGCAGAAGAAA GGGTCTGTTTAACACTAGATGGTTCCACATAAGCAAGAAGAAGAGTGGGTTGAACCCTAGGCTTGACTATGCCTGCCTTA GACCTTGTAGCCATGGGGTGGACATAAGTAGGTAGGGATGAAGAAGTAGGAGGTGGAACAGAAACAGAATGTGTAACAAA AGGAGCAAATGAGGGTTCAGCAACAGAAGGGAAATATCCTGCAGAAACAGTAGCAGAAGGAGAATGAAAAGAGCTATGTG AATTAGTGACCTGTGGTGATCCAACTTCAGAAGGAGTTATTAAAGGAATATGGGCAGGGATGGGTATGAGAGGTGAGGAG GAAGAGGTGAAGAAAAAAAAAGTAGGATAAGGGAAGGAGGACTCGTTAAAAACAACATCCTTTGACAGTTGACACTATTA AGTAGTATTAACTTTCTTTGAGGTGTAAGTCACTTGTAGCCTTTATGAGCAGGTGAGTCACCTAAAAATAAGCACTCCTG AGTTCTAAAAGACAGCTTGTGTTTGTTATAAGGTCTTAGATAACGAAAGCAAGAAAGGTCAAACACCTTTAAGAACTTGA AATCTGGTATTTTGTGAAAAAGAACAGTGTAAGGAATCTTAGACTCAATGGATGTAGAGGAGAGTCTATTCATAAGATAG ACAGAAGTAGTAAAGGCGTGATCCCAATATTTATAGGGTAAAGAGGATTGTGCAAGCAAGGAGAGGCCTAGATCAATGAT AAAGGAAATTGAATAAGGTTGTTGAATCACAATTATGTCATTTAGGTTCAAGGGATGCTAAAATTGCATTAAGTACCTTG TTGTATCGAACAAAAATTGCATATGGTGCATTGTTGCTCAAGAGAAAAAAAAATTGTATAAAGTACACTGTTGTTTCAAA ATATATGGCATGATTTGAGGTTATAATACCTTTTGTTCTGTAATGTTAATTAAAATAGTAAAATAGAGAAATACAAGCTG ATGTGTATTATATTCTGTTTGGATTTCCTTAGTTTGTGGTATAATGATTGTAGATATCTTCATTTAGCTACATAATAAGC TTAGCATTTCTTGGTTTTAGTTTGTTGTATGTGACTGTTGGAGAACTTTCATACCTTTCACAAGGATATTATGAGATGTC ATTGTTGTAAATGTTTTTACTACTGACACTGAGTTATACTCATATGCTTTGAACTCAGCGACAGGAAAAACATTTACAAC AATGGCATCCCAACATACCCGTGTGGAAGGTATGCAACCCCCACCCTCACCTCCGAGACTGCTTGGGCTATGCATCGACC AGCAAGTAGCAAACGGAAGAGAAATTTTTGCTATGACTCATCTTTTTTTTACTGTGTTGTTGTCCTCCGTCCTTCAATGT ACTTGAGATGTGACCCTAATTTCAAATCTTTAACTCTTACATTTGATTTCTAAATGTTTATAAGCACCTGATGCCATGGA TTGGAATACTGAGTAGTGAGTATGTAACTGTAATGCCTAAGTCTTTTGAGACCTAAGCAGCAGTATGTTCTTTATTTGCC AAACTGCATGGGTGTGATATTTGTAGAAGTTTTTACTTTTTACTGCAAGTGAAAGTTCTTTTCTGTTACTCAATGTTTTT GATGCAGCGGATGAGATGGGTTTGGGGAAACTGTTGAATTGCTTGCTTCTTTTCTTACCAGAGATCAGCATCTGGAAGTG ACATACTAATTGACTAAGTGCCCCAAGTTAACGAGGACCAAAAATTCACTTGGAAAAGACGCAAAAGAGTGTGTGAAGTG CATATGTGGAGCTATGAACGAAAATCTCAAATATCAAGGTATATGGGTTCAGTGTGACATTTGTGATGCTTAGCAACATG CAGATTGTGTTGGTTATTCATCTAAAGGAAAATCACTGGGGAATATGTATGTGAGATGTGCTCTGAACTAATACAAGCTA CATAATCTCCTATTGCCTCCGGTGCTACTCTCATTGTCTGCCCTGCTCCTATTTTTACCGTAGTGGCATGATGAAATTAT ACAGTACAGTTTTTGTAGTATCCACCATAACCCGGGCAAAATCAAATCTATCTTTTCGTGACGTTATGTTGTCCCCGCAA ATGAAGGTTCTGAGGACCCCCGCTATAGCTGAGAAGAAACGTGTATTATTCCAAGCACCCAAGG
CDS sequence (LotjaGi1g1v0152800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGATTCCTGATGATGTCGCCTTCACGATTCTGTCGAAACTGCCTCTGAAATCTCTCAAGCGATTCACACTGGTTCA CAAATCATGGGTTGATTTACATGAAATCCCTTATTTCATGAGCATGTTTCGCAGCAATTTCTTATCCAAACATCAATCTT ATTACGATGATACATCTCTCCTTGTCTTACAGCAGCAGCCATCAGATGGCACCCATTGTCACGGTTCATTGTTTTTGCTT TCTGGTGACAATTTTGAGAAAACAGTCAAATCAGATTGGCTTCCATATCAAGAACATGGCAGATTCCTTAGTGTTTTGGG TTCGGGTATTCATGGCATTCTTTGTCTCCATGAAGCACCAGATTATAAGTATGTATTGTGGAACCCAGCTACTGAAGAAT TCAGAGTTACTCCTCCCAGCCCTAGAGAGTCTCTACCTTATTGGGAGGCTTATATTAAACCTCATGGATTTGGTTATGAT CCTATTACTGATGACTTTAAGGTCCTTCGGCATATAACTTTTTATCCAGATTATGATTATGGGCAAGATGAATATCATTC GGGAGTTGAAGATGATAATGATGATGACGATGATGAAGATGATGATCTGCAAGATGAGCCAATGATCTCAGACCACTTAC CAAGTCGAATACCACAACCCTTCTGGGAGATATATAGCCTAAGAAGCAACTCTTGGAGGAAACTTGATGCTGATATGCCT ATTACTGGAGGCGGTCCCGACAAGGGTGGTGACACTTACATGAATGGAGTGTGTAATTGGTTGAGTTACGGTCGGATATA TGACTATGGTTTTGATACACATTTGGTGTCATTCAACTTTAGCAATGAGATATTCTACACAACGCCCTTACCGTTAGATC TGGCTGATACAAGGGTGCAGACATACTTGGCGGTGTTAAATGAGTCCATTGCGTTGATATCAATGCATGAAGAAACAACA ACTTTTCACATATCCATTTTGGGTGAACAAGGTGTGAAGGAATCATGGACTAAACTTTTCATTGTTGGACTTGGACCCTT GCATGACGTTGGGCTTCCTATTGCAGTAGGGAAGACGGGTGAAATGATATTCTCCAGAAGAGAAAAGGGTGAACTAGCCT TGTTTGATTTAAGTACCCAGATGCTCAAGAAGGAGATTGCTGCTACAGGGCTGTTAGATTATGATCAGATGGTAATTTAT AAGGAAAGCATTCTTCCCATTGGGAGAACAGGTTATTAG
Protein sequence (LotjaGi1g1v0152800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAIPDDVAFTILSKLPLKSLKRFTLVHKSWVDLHEIPYFMSMFRSNFLSKHQSYYDDTSLLVLQQQPSDGTHCHGSLFLL SGDNFEKTVKSDWLPYQEHGRFLSVLGSGIHGILCLHEAPDYKYVLWNPATEEFRVTPPSPRESLPYWEAYIKPHGFGYD PITDDFKVLRHITFYPDYDYGQDEYHSGVEDDNDDDDDEDDDLQDEPMISDHLPSRIPQPFWEIYSLRSNSWRKLDADMP ITGGGPDKGGDTYMNGVCNWLSYGRIYDYGFDTHLVSFNFSNEIFYTTPLPLDLADTRVQTYLAVLNESIALISMHEETT TFHISILGEQGVKESWTKLFIVGLGPLHDVGLPIAVGKTGEMIFSRREKGELALFDLSTQMLKKEIAATGLLDYDQMVIY KESILPIGRTGY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 364 | 362 | 8.0E-29 | – | |
| PANTHER | 3 | 364 | 362 | 8.0E-29 | – | |
| SUPERFAMILY | 3 | 46 | 44 | 4.32E-6 | ||
| MobiDBLite | 185 | 215 | 31 | - | – | |
| MobiDBLite | 188 | 206 | 19 | - | – | |
| TIGRFAM | 222 | 352 | 131 | 8.5E-14 | ||
| Pfam | 254 | 376 | 123 | 2.1E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0152800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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