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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0161300 |
Transcript ID | LotjaGi1g1v0161300.2 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | WAT1-related protein; TAIR: AT1G21890.1 nodulin MtN21 /EamA-like transporter family protein; Swiss-Prot: sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890; TrEMBL-Plants: tr|A0A0S3RN70|A0A0S3RN70_PHAAN WAT1-related protein; Found in the gene: LotjaGi1g1v0161300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:30085432..30091514) extracted from Lotus japonicus Gifu genome v1.2.
ACCCAACTTCACTACTACTTCTCAAAAACAAAGAGATCTATCTAGAGAGAGAGGTAATAAATTTAAGATGGGTGTGACAA CGTGTTGTGACAAGGTGCATTCATGGTTCCGCGATTCAAAAGCGCTTTTGATAATCATAAGCCTGCAATTTGGCTCTGCT GGGATGTATGTTATCACCAAGGATGCTCTTAACAAAGGAATGAGTCATTATGTGTTTGTTGTTTACCGTAATATCATCGC CACTATAGTTCTTGGTCCCTTCGCATTTTTTCTTGAAAGGTTATAATTTCCCTTCTTCTCTTATTCATACTTAACATCGA GCATGCATGCGTGCATGTTCCACACACATTTTTACTACTTGATGAATATAATATGCATAAGACCTAGCTTTTCATTGTGT GATCAATAGTTGGAAGAGAGGGTGTTTCTATTTTTTACTTCCAGAAAAAACGGTTGGATTGATATTGACTACGTATGTCA CATGATTTTGTAATCGTATTTGTTAAAATTGTGCGTTTCTTTTTAATTATATGAATATTATAAGATTTTACTGAAATAAA CTCAACTTCAACATCATAAAATCATATGAATTTTGGGTTGTCTAAATGACCCATGATAAAGTTTGGGTTAAATAACTCAT CATCCAATCACGTTGGAGATAAATGAGTTGGAAATAAATTAATAAATAAAATATAGAAATTTCAACTCACTTATCTCCAA TGTGATTGGATGATGGGTTATTTAACCCAAACTTTATCATAGGTCATTTAGACAACCTCGAAAATTTTGAAATAGCACTT CTAATGTCTATACATTTCAGTATATAGATATTATCCATTACTTTTACTATTATTTCACCATGCACCAACCATTTTTTTAG GTTACTTAGTGACTCGTGTAACTAACTATAAGTCTATTTTACCTTTTTCAGGAAAACAAGGCCCAAGATGACAATTCGGA TATTTTCAGAAATTATGGCTGTGGCTTTTGTCGAGTAATATATCATCTTTAACTTGTCATATATTGTGTAAATAGATAGA GTTTTGATTTTAGTCTACCTAATTTTTAAATTTATATACGTCTCCTTTCTATTTTTGTATTCCTTTTAAACTCATATCAC CAATTAATTTTCAATCATATTGTTGGTCATTTATTTTTTAGCATACATATTAACTATGCTATGTCAATTATATACAGGAT AATACTTGATCAGTGCTTCACCTTCCTTGGGATGAAGATGACATCAGCCTCTTTTGCATCAGCCGTGATGAATTCCGTAC CATCCATCACCTTTGTACTCGCAATCATTTTTCGGTAAGAAATTTAATCAAATTAAATTATTAATTAAGTTTTATCTACC TGAATCAAGAAAATCATATTTAATTTTAAAGTTAAAAACAGAGTTTCTCCATAAATTAATTTAAAAACATAACAAATATA TTATAATTAACATGTACTGAACATGAATTACAAATATATGGTTTATAAGCGAACATGTTATTAACATGATCCATCATATA ATTGGTGTACTCGTTTTTATCACTTGCTTTATTTGCTGACACATGTAGAATGCTTGAACAGAGAAATAAGCACGTAGCAT GTGAATCCTACATAGATTCCACCACCAAGTTTAGGGGGGTAGTTCCTAATGACTCTTGGACATATTTAATTTTGGGCGGA TTCTACCATACCCCCAATGTATGGTACACGACTGACGAGTTATGACGTGTACCAATGGGGGAGCGACACCTGGTACCGTA TTTAAATATTTGTTTCAATTTTTAACATTTTCCAAAAATATAAGAAAAAGACATATTTATTATTCATTATTATTATATCC AAGTTGAGTTAAGGTTAGTGAACCCATGTGGGTCCCTCTATGGTTAACACATTTCGAGGCTTTGAATTTCTGAGAGGGAA ATTGAAGTGGGTTGTCACCTTTGGAGGGAGCAGAACAAAGAGTGCACGGCGGTGAAGGCGATTATGGCAGTGAAGGCGAC AACGGCGGCGAAGGCTCCACTGTAAGCAGCGAAGGCTTGTTGGTTAGCTCCTGAAGCTATTTGAAGTGTTTGTTTGTGAG TTTCTTTCGGAATTCGACATTTAGGGTTCTAAGCTCTTGTTTTGTGTTACTGTAAGTCCTTCTCCTCTTTATTTAGTTTT TGTGTGTGTTTCTTTCGATTTATGGGTTTTTCAAGTTTAGGCCTTTCTCAAATGGTGAATTTAGGTTGTGTTTGTTGTGT TGATTTAGTATAGCTTCGATTTTTTGGATCTGAAAATGTACCATTCTGAAGTTGGTTAGGTAATGGAAAGTAATGTACAA TCCGGTGAAAATGGAGAGGAAGAAGCCCATGTCAGTTTAGGTAACAATGGGCATGAATTATCTGAGGAAAATGGTGGTTC TACTTGAGTGGAGGATGAGGACGATGATGGTGCTGTGTATGAGAAGAGCATATTAGATTTGACAGAAGATGATATAATGG GTATGGAATTTGATTCTGAAGAGGATGCGATTAAGTTCTACGAAAGATATGGTCAGTGTTATGGTTTTGGTGTAAGGAAA GACAATGTCTATCGTTCTGCTAAGGGTTACATTGTTACTCGTCAACTGGTATGCAGCAAAGAGGGGGTGAGGCATAGAAA ATACGTGCAGCGGAGGGACCGGGTTAGAGTTTCAAAGGGAATTACCAGGGTGTCATGTCCAGCTCGCTTCCGTGTTCGCT TTGAAAGCAACTCAGGTAAGTGGAAAGTTGCTTACTTTGTCAAGAATCACAACCATGTTCTGGCACCTGTGGATAAAGTC CACTTGATTTCTTCCTTTCGGCACCTCAATGATTCTGACAAGGCTCAGATTAATAGCCTTAAGCTACATGGGGTGAGGAC TTGCAACATAATGGGCTTGATGCTGGGGCAGAAAGGTAGTCATGAGGCATTGGGTTTTACGAAGAAGGATCTGTTCAATC ACATTGATAAGGAGAAGCGGATAAGGGTAGGAAACGGAGATGCAGTTGCTGCTTTGTCATATTTTCAGGCTAAGGCTGAG GGTGATCCAATGTTTTTCTCCAAGTATACTAAAACTGAAGATGAAAATCTCAAAGACTTATTTTGGAGTGATGGAGTGAG CAGAGTGGATTACCATGCTTTTGGCGATGTAATTGCCTTTGACAGCACCTATAAGAGGAACAAGTATAATAAGCCTCTTG TGATTTTCTGTGGCTACAATCATCATGGGCAGACAACAGTTTTTGCTTGTGGTTTGGTTACGGATGAGTCGATCGAGACT TATAAGTGGGTTTTGGAGACATTTGCTGAGTGTATGTTTCAGAAGCACCCGAAAGGTGTTGTTACAGATGGTGATTTAGC AATGAAAGAAGCAATAAGTTGTGTCTTTCCTAATGCCCGTCACAGGTTGTGTGGTTGGCATATTCAACAAAAAGCGCTAC AGAAACTTAAGAATTCAGACTTTTTGGATGATTTTAAAGTTCTGATTTATGGCAACTTCAATCCGGATAGATTTGACCAT GTTTGGGCTAAGGTTATGGAGAAGTATGGATTTGGTGATGATGAGTGGTTGACAAGAATGTATGGGATGAAAGAAATGTG GGCAACTGCATTTATGAGGGACAAATTCTTTGCAGGCATAAGAACCACGTCAATGTGTGAAGGGATCAATTCATTCATCA AGAGCTATGTTCAATGTAAAAACAGTTTGATTGATTTCATTCATAATTTTGAGAGGGCTGTGAAGGAGTACCGACACAAT GAGTTAGTTGCTGATTTTAACACAATGTATTCAGAACCTTTGCCCACTACTTCCCTTGGTTATATTGAGCGGGGTTTCTC CCATAAATTGACAAGGAGCATGTTCAATGAAGTTAAAACTCAGATTCAATATGTGGGTGGCTTAAATATTATCCAAAGGA CTGAGGTCAATGATGTGGTGATGGTGAAGATGAACAAGGCTTTGTATGAAAGGCGTGAGTATGTGGTGTTATATGACAAG AATTCTTCAAAGTTTGTGTGTGATTGTGGTCACTTTGAGTATTATGGAATTCCTTGTTCTCACATGATATGTGCAATGAG AAATGAGAGACTGGCTGAAGTTCCTGATAGTCTTATTTGTAAACGGTGGTCAAGGACGGCTAAGGTGGACTACATGACTC AGATTAATGACACTGTTACTGGCAATGATTCAAAGAAATTGGCGATGTTAAGGAGGGGTGTGCTTTCTGCTGCTTGCAAC ATACTAAGTGAAATAGCTTGTGAGAATGTGAATGATTTCTCTCAAGTCTTGCAGGACATATATAAGTTGGCTGACAGTGT TCAAAGGCGTAGGGTGGGAAACAAAACCATCCGCACTGGACCATTCTTGATTGGTGATCCCGCTGTGGTGATCACAAAGG GGCGCAAGAAGAAAGGTGGGAAAAAGACAAGGTTGTGCTCAAGATGCAGAATGCCTGGTCATACAATTCGCACATGCCCG GAAATGCGTGAAGGTCAAGGAGTTGGTTCCCACGACACTGCTATGAGTGATTCATCTGTGGAGCTTGATGATGTTAGTAT ACATTTGGAGTTCTTAAACTATAATATTTTATTCTACTTGTTTCAGTTTAGTAGTGATTTAAAATTAATTTGTGTGTGTA GGTTGATGAGGTATTGCCATATAATGTAACTATGCCTGGAGTCTCCTCACTTGAAGTTGCTGGAAAAGGCAAAGGCAAGG TATTATCCTTGTGGGCCATCTTTGTTTCATTCATTTTTGATCAGTACATGTCCATGAGCATTTTAGATTTAACTTTGTTT TACAGGATCAGAGTGTTAACGAAGCTTGTTCTCAAGATTTGAATTATCCTTTTATGACTCCTTTGACCCAGGAGTATTTT CATCCTGGAATGAACATCATGGATGGGTTCACTTTGCCATCATACCCTGGGATTCGCATATGTGAACCTGGATCTTCTAC ACAAGTCCCAACTGTAAGTGTGAATGTGTTCTTGAAAGGGATTAAATTTTGTCTGCCAAGATTATGTTTTCAGATTTTGT AACCAATGTTGGCAAAATCTATAGCAAAATCGCAAAATCCTAAGATTTTACGATTTTGCAGCACTGTTCCGATTCAAATT GCATGCAAAATCTTTTTTTGGTGGAATCCCGTAGAATCTTAGATTTTAATCGTAAAATCGTAAAATCCTATTGAATCTTA CGATTCTAGTATTTTTTTAATTTTTGAAGCTGATTCCTAAAATTGGGGAAACTAGAGAGTTTTTTTACTTTGTGGAAAAA ACAACCCACCACCCAGCATTTAGGGGATTTCAAAATTGAAGCTCTAATTGATTGTAGTTGCCAAATTTGAATGGTTCATT GACAAGAATTAATAACTGATTGTATATTTTGAAAAATCAACTCATGTGACCGTTTTCATGCCTCTAATTGCCTATTTAAT TCACTCATAGTAGAGTGAATTGAATCACGCATTCATGCTCTGTTTTCTGTAGTCTCTATCTAGGTCTCTTCTTCTTATGT TTTCTCTTCATTCTTCAACATCTTTGTTTTCCTTCATTCTTAGTACTCTTATGATTTTGGATTGAGATTATGACTTATAT GGATGTTAATCTAATGAATTTTTATTCCAATTTTTGTTAAATGATGTGACTTACAAGATATCAATGCTATTTTTTTGTTT TTCTATTCATGGTACAATCTTACGATTCAATTTACGATTATACGATTATCCGATTTTGAACCCCCTCTCCGATTCTACGT AGAATCTAGTTTTTCACAACATTGTTTGTAACTAAACTATTGTTGTGACACAGTTTGTGGGTTGCTTAAATGAAGTTGAG CGGAAGGCCAAGGCTGCACGCATTTATGTTAGCGATAGCAGTGGAGAAGATTGATGTCGTTGGGGATGATGATGCGGAGG AGTAGATGGTGAAGACACTTTGATTGACTGTAGTTTAGGTTGTGGTAGTTTTTGGATTGATTAATGGAAATGTTGATACC TAATAGCATACACTTTAATTAATTTGCACTGTGTTCTGTTGGTGCCAGCCACATGTGTTGTTATTCAATGCATTTAACTT AGG
CDS sequence (LotjaGi1g1v0161300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGTGACAACGTGTTGTGACAAGGTGCATTCATGGTTCCGCGATTCAAAAGCGCTTTTGATAATCATAAGCCTGCA ATTTGGCTCTGCTGGGATGTATGTTATCACCAAGGATGCTCTTAACAAAGGAATGAGTCATTATGTGTTTGTTGTTTACC GTAATATCATCGCCACTATAGTTCTTGGTCCCTTCGCATTTTTTCTTGAAAGGAAAACAAGGCCCAAGATGACAATTCGG ATATTTTCAGAAATTATGGCTGTGGCTTTTGTCGAGATAATACTTGATCAGTGCTTCACCTTCCTTGGGATGAAGATGAC ATCAGCCTCTTTTGCATCAGCCGTGATGAATTCCGTACCATCCATCACCTTTGTACTCGCAATCATTTTTCGTTTGTGGG TTGCTTAA
Protein sequence (LotjaGi1g1v0161300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVTTCCDKVHSWFRDSKALLIIISLQFGSAGMYVITKDALNKGMSHYVFVVYRNIIATIVLGPFAFFLERKTRPKMTIR IFSEIMAVAFVEIILDQCFTFLGMKMTSASFASAVMNSVPSITFVLAIIFRLWVA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 18 | 18 | - | – | |
PANTHER | 15 | 132 | 118 | 3.9E-59 | ||
PANTHER | 15 | 132 | 118 | 3.9E-59 | – | |
Phobius | 19 | 36 | 18 | - | – | |
TMHMM | 20 | 37 | 18 | - | – | |
Pfam | 20 | 130 | 111 | 2.4E-11 | ||
Phobius | 37 | 47 | 11 | - | – | |
TMHMM | 47 | 69 | 23 | - | – | |
Phobius | 48 | 69 | 22 | - | – | |
SUPERFAMILY | 53 | 130 | 78 | 1.09E-6 | – | |
Phobius | 70 | 80 | 11 | - | – | |
TMHMM | 81 | 103 | 23 | - | – | |
Phobius | 81 | 102 | 22 | - | – | |
Phobius | 103 | 113 | 11 | - | – | |
TMHMM | 113 | 134 | 22 | - | – | |
Phobius | 114 | 134 | 21 | - | – | |
Phobius | 135 | 135 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0161300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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