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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0172000 |
| Transcript ID | LotjaGi1g1v0172000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Hemoglobin-like protein; TAIR: AT4G32690.1 hemoglobin 3; Swiss-Prot: sp|Q67XG0|GLB3_ARATH Two-on-two hemoglobin-3; TrEMBL-Plants: tr|I3SAV1|I3SAV1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0172000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:32767437..32771792) extracted from Lotus japonicus Gifu genome v1.2.
AGAACAATCCAAGGTTGATTTTATTTTTTGTTACAAAGAAAACAAATAAGAAATCAAATTTAAAAAAATAATAAAATGAA AATATAATGTACAAGAACTGCGTGCAATCTAAGCGAACTTTAGGGGAGAAGTTTATTATGGTCCTCTAAAAACTTGTGCA TGGTTGCACATCTGCTTTTTGACCTGCAATAGGAAGTTTAGCAGGTAATTTATATTTTGTAAAAATAAAAATATTTAATA TATTATGATATAATTAGGGAAATAATTATTAATAATCCACATTTTAAGATGGTTGTTGATCATCATCTTCCACAATTCCT CAGGTCCTCTCTCCTCCTGCAGATTTATTTTCTGAGATACCAAACAAACATGTTCTTCCTCCTCAGATCCATAATCTTCC CAGCAGCCACTGTTATACAAATGGATAAAAGAAGCATAAAACCACTTAATCTTCCCAGCAGCCACATTATACAAATTGAA TCTGGATCTGGAACACACCGAGCCAACCCACCCTAAAACCACCAACAAACCCAAACCACCAGATCTGAGGAGAAATCGCG GTTGAAGTCGATTTGAGAAGAGGAGATGACTGAGGTGTGGATTGAGAAGAGATGAGATGATTGTCGTGTAGATTGGGAAG AGAGGCGGCGGAGATGGCGGCGGCGACTGGATTGGGCAGAGGTGTTTGGGTCTTTTTGGAGAAGAAGAGAGGGGAAGAGG ATGAGAAAAGTAAGGCTTTACAGATCTGTTGTTTTGGTTGCTGTTGGTACTGGGTTTGTTGTTTGGTAGATTCAAGCTTT CTATGGATTCTATGAAGGAGAAAGGTTTGTGGGGAAGATGAAGAGAGAATGGGTAGTGAAGGAAAATTGTGGGTGTTTAG TGTAATTTTGCTTTCTGGGTTTTCTTTTCTTTTCTTTTCTGGGTTTGATAAGTAATGATGATGATTTGGTTTTCAATTTT AACAAGCCAAAGGAACAGAAAAATGAATTGAATTGATAAGGAATAATTATCAGAGGTTCCCTTCCCTGAACCGCTCTTTG TCTCTGTTGGTGCTTCAAAGTCGTACAAACGGATATTCCGCTGAATCGATACCTCGTTTGATTTCTGGAACATCATCTTT GAATTTCAGATTAGATATGGCTTCCTTTAATTTTGTCCTCTGAATTCTTATTTTTATTCTCAAACTTCCCATATGGGTTT TCTTTTCTTTTTTCCTCTGTGTCGTGTGTTGCACCTGAATTTTTTTTCTTTGGGTTGAGGAAGAACAAAGCATGATGATT GGCTTTGCAGAGATGGTGGGATGGGTTTTGGGGTTTGGATATTGATAGAAGTTTGGATCAGGTGTTGAAAAGAGAAGAGA TGAAGAAGGGAGAGAGAAGAGGAAAAAATTAAGGATAAATTATTACCTTAATGGGTTAATCTTAAATGAACCCTAATCAT TCTCTAACTATTTACTTAATAATTGTATAATATATTAACTATTTTAATTTTTAAAAATATAAAAAATACAAAAAACCTGA AATGACAGGTCAAAAGGTAGAGGTGTAACTTTACACAAGTTTTTAGAGGACCATAATAAATTTTTCCAACTTTATGAGTT CAATATAAATTGTACTTGCAGTTACTGTAGAACTCCCTGAACCATTCACGGTACATTCGTGATTGCTGTTTAGGTCAAAG GCTGTGTCGTTTGAGAGATGCAAAGCCTGCAGCATAAAGCTTCTGAATGGAGCGGAGTTCCCTCCGATGAAGCTTTCGCC ATTGACGACACCAATCTGTTCCTGAAACTTGGCCTTCAAACCTTTATTAACCTCTCCACCAATTTCTACAACAGGTACAT ACATACATACATACATACATACATTTCGCCTGAAATTGGCTTTGTGTTTGTTTATGATTGAAATTAATTGTATTGATTTT GGGTTTCGTACGTGCAGGGTGTATGATGATGATGAAGAATGGTTTCGTTCTATATTCGCTGATTCTGAGAAACAAAACGC CATTCAAAACCAATACGAGTTCTTTGTGCAAAGAATGGGAGGTCCTCCTCTCTTTTCTCAGAGACAAGGTACCGTTTTCT ATATTTCATTGCTCTTCGAAATGTTTCCTTCATCAAATTAATTATTTGAATTAAACCCTAGTCAATTCTAGTAAGCGAAG CTCCTCAAAGTTGGAGGTAGAATCAAAAATACTTCAGATGGTTGAATTGATTGGTTTTATTTATGTGGTGTATTTTTTGA GGAATGTGTAAATTGAGTGATTGTTCATCTCAAAATGATAAGGGAAAATGACTGAGAATTCATAGTAAGTAATTCCAAGT GATGTGGGTGTTTGTGTCTTTGTGTATTGTAATGTTTTGCTGATTGATTTATATTCCTTTCCTCAAAAGATTTTAAGCAA AATGTGTAAGGAAGAAGATAATTGTTAAAATATAATATAAAACCATTGGTGTGACCCTTACTCAACAACTTAAGCTTTTG GGATAAGTGGTTGCTTGACATGGTATCAGAGCCTCTATGACTTAGTAGTCTAGAGTTCGATCCTTGCTCCCCTCACTTTC TAATTAAAAAGTGGAGTTTAAGCACATGGTAGGTGGGCTTGTGCATCCAGGCTTCAATCCCAAAGGACTCTTGCGTGAGG GGGCGTATTAGAATATAATATAAAACCATTGATGTGACCCTTACCCAAACAGCTTAAGCTTTTGGGATAAGTGGTTGCTT GACAATAATCAATCACCTTGTCAAATTTGTAGCTCCGGTTAGTGTGGTTGCTGAAAGATTGAGTCATGCAAATTACAAAT CCAAAGTACCGACCGAAACTAAGAGAAATAAATAAAATTTACAGAGGTTTATTCTACTGTAATCCACTTCAGCATGTATT GGTTATGTTGAGAGAAATCTTTACAACCTACCCCTTTCAATTTTCCCAGCAAAAGCTTAGTGGCCAATTTACCACCTAAA TCTGTACTTATCAGGAATGAATTTAAATCCTCTTAGAAGGATAATGGATATCATCCTGTTGGATAGAGAGAAACTTCATT TTATTTCAATTTAACTTGTGGACTTTTCATTCTTCAATTAATCTTGGTTGGTCAAGTTAGTTCTTGCATGACAAAATTTG CTTCTCTTACCAATAGGACTGTATCTTAATAGTGTTAAAGAACAGGCAGGTTGGGTCCAGTCCCGTTAGGAGTGAAGCTA CTCTATATGAGTTTTAACAACTTGATAACTGAGACAGACAATTATTAAAACGTTTAGATGCATGTGAACAAATTTCTTTA ATGATGTTGCATTTTCATCCATTGATCCCATCACATGTCCTCTATTCTTATATTTTTATGGCATGGTTACATTTGGTGTT TTCCTGTCAAAGTTAGATTGATGAAATCAAAATTGAATGTTATACACATTAAAGAGAAAAAGCCTGCTTAATTAAGGGCA TATGTCAATAAGAGCTAATCGCATAGGGGCTTATTCATAAGGTAATTTCATGAACTTGTTGAAATCAGCTTAAAATAGGT TAAGCACTTATTCATAAGCTAATTTGAATAACTCATGAATATAATTTCAAAACAGCTTATAGGTAGATCATAAGATATAC ATTAGATTTGTCAAACACTAGCATAAGCACTTATGCTGTAAAATAAGCTCAAATAAACTCTTTTGAATGTTGAACATTGA ACCGTGGTTTCTTCATTGATTTATGTCAGGGCATCCTGCCCTAATTGGGCGACATCGACCATTTCCTGTCACACATGAAG CTGCTGAGAGGTGGCTACATCACATGCAACAAGCATTAGACAGTACTCCAGATATAGATGATGACTCAAAGATCAAAATG CAGAATTTTTTCAGGTTTATTTTCTTTCCAGAAGTGCCACTTACCAGCAAATGTTTACCCCTTTTAATATCTACTATACG CACCCCCTTTTTATGTTTTTTAGGCACACAGCATATTTTTTGGTGGCTGGAAATGAGCTAAAGAAACAAAACGAACAGAT GCCATGCAAACATGCAGCCGGAAGTGATAATTCATGATACTTGCTATCAGTTAACTAGTGTTTTTACCTGTACGCTGCAC AGCGAAAAAACGATTCTGAATTTCTTACATTATTAACAGCTTACTTTGTATCAGTTAATTGCCTTATGCTTTTATTTATA AAACTCCGTATTGAATGGACTAGAAGAATCATCCATGAACTGGGAGATGAATTTGGTTATTTGTTAGTTTAGAATTGATA AAATGCACGAAAAATTGAAATAGCAATTGCACTTCTCTATGCATTGACAATTCAAACATCTGATAGTTAAATCATGACAA ATTGAAATATAATTTTCTTAGTTTTCCGATGGAGTA
CDS sequence (LotjaGi1g1v0172000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAAAGCCTGCAGCATAAAGCTTCTGAATGGAGCGGAGTTCCCTCCGATGAAGCTTTCGCCATTGACGACACCAATCT GTTCCTGAAACTTGGCCTTCAAACCTTTATTAACCTCTCCACCAATTTCTACAACAGGGTGTATGATGATGATGAAGAAT GGTTTCGTTCTATATTCGCTGATTCTGAGAAACAAAACGCCATTCAAAACCAATACGAGTTCTTTGTGCAAAGAATGGGA GGTCCTCCTCTCTTTTCTCAGAGACAAGGGCATCCTGCCCTAATTGGGCGACATCGACCATTTCCTGTCACACATGAAGC TGCTGAGAGGTGGCTACATCACATGCAACAAGCATTAGACAGTACTCCAGATATAGATGATGACTCAAAGATCAAAATGC AGAATTTTTTCAGGCACACAGCATATTTTTTGGTGGCTGGAAATGAGCTAAAGAAACAAAACGAACAGATGCCATGCAAA CATGCAGCCGGAAGTGATAATTCATGA
Protein sequence (LotjaGi1g1v0172000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQSLQHKASEWSGVPSDEAFAIDDTNLFLKLGLQTFINLSTNFYNRVYDDDEEWFRSIFADSEKQNAIQNQYEFFVQRMG GPPLFSQRQGHPALIGRHRPFPVTHEAAERWLHHMQQALDSTPDIDDDSKIKMQNFFRHTAYFLVAGNELKKQNEQMPCK HAAGSDNS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 165 | 165 | 2.5E-96 | – | |
| Gene3D | 1 | 151 | 151 | 5.9E-50 | ||
| Pfam | 27 | 142 | 116 | 6.1E-40 | ||
| SUPERFAMILY | 27 | 145 | 119 | 2.06E-24 | ||
| CDD | 28 | 146 | 119 | 4.34998E-61 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxygen binding | Interacting selectively and non-covalently with oxygen (O2). | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. |
Expression pattern of LotjaGi1g1v0172000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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