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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR012292
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We have found 19 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.799s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0302239.1
n.a. PREDICTED: group 2 truncated hemoglobin YjbI-like [Cicer arietinum] gi|502124477|ref|XP_004498545.1| chr0 157207724 157208925 -
2 domain predictions
2 GO terms
Lj1g3v0948590.1
n.a. PREDICTED: group 2 truncated hemoglobin YjbI-like [Cicer arietinum] gi|502124477|ref|XP_004498545.1| chr1 11909500 11913722 +
2 domain predictions
2 GO terms
Lj1g3v2035270.1
n.a. PREDICTED: group 2 truncated hemoglobin YjbI-like [Cicer arietinum] gi|502124477|ref|XP_004498545.1| chr1 23891532 23892627 +
2 domain predictions
2 GO terms
Lj3g3v3338170.1
n.a. nonsymbiotic hemoglobin [Lotus japonicus] gi|77799654|dbj|BAE46739.1| chr3 40832952 40834413 -
2 domain predictions
2 GO terms
Lj3g3v3338180.1
n.a. nonsymbiotic hemoglobin [Lotus japonicus] gi|77799656|dbj|BAE46740.1| chr3 40836056 40838392 -
2 domain predictions
2 GO terms
Lj4g3v0353430.1
n.a. nonsymbiotic hemoglobin [Lotus japonicus] gi|77799656|dbj|BAE46740.1| chr4 4711149 4713485 +
2 domain predictions
2 GO terms
Lj4g3v0353440.1
n.a. nonsymbiotic hemoglobin [Lotus japonicus] gi|77799654|dbj|BAE46739.1| chr4 4715176 4716187 +
2 domain predictions
2 GO terms
Lj5g3v0035290.1
n.a. leghemoglobin [Lotus japonicus] gi|77799650|dbj|BAE46737.1| chr5 102831 120467 -
2 domain predictions
2 GO terms
Lj5g3v0035290.2
n.a. leghemoglobin [Lotus japonicus] gi|77799648|dbj|BAE46736.1| chr5 119666 120461 -
2 domain predictions
2 GO terms
Lj5g3v0465970.1
n.a. RecName: Full=Leghemoglobingi|11230993|dbj|BAB18108.1| leghemoglobin [Lotus japonicus] gi|20138517|sp|Q9FEP8.1|LGB_LOTJA chr5 4480835 4482438 +
2 domain predictions
2 GO terms
Lj5g3v1699110.1
n.a. PREDICTED: leghemoglobin-like [Cicer arietinum] gi|502118192|ref|XP_004496145.1| chr5 24603810 24606105 -
2 domain predictions
2 GO terms
LotjaGi1g1v0172000.1
n.a. Hemoglobin-like protein; TAIR: AT4G32690.1 hemoglobin 3; Swiss-Prot: sp|Q67XG0|GLB3_ARATH Two-on-two hemoglobin-3; TrEMBL-Plants: tr|I3SAV1|I3SAV1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0172000 LjG1.1_chr1 32767437 32771792 +
2 domain predictions
2 GO terms
LotjaGi1g1v0398700.1
n.a. Hemoglobin-like protein; TAIR: AT4G32690.1 hemoglobin 3; Swiss-Prot: sp|Q67XG0|GLB3_ARATH Two-on-two hemoglobin-3; TrEMBL-Plants: tr|A0A0L9TDT4|A0A0L9TDT4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0398700 LjG1.1_chr1 88532496 88538077 +
2 domain predictions
2 GO terms
LotjaGi3g1v0504500.1
n.a. Non-symbiotic hemoglobin 1; TAIR: AT2G16060.1 hemoglobin 1; Swiss-Prot: sp|Q9FVL0|HBL1_MEDSA Non-symbiotic hemoglobin 1; TrEMBL-Plants: tr|Q3C1F4|Q3C1F4_LOTJA Nonsymbiotic hemoglobin; Found in the gene: LotjaGi3g1v0504500 LjG1.1_chr3 92242512 92245846 -
2 domain predictions
2 GO terms
LotjaGi3g1v0504600.1
n.a. Non-symbiotic hemoglobin 1; TAIR: AT2G16060.1 hemoglobin 1; Swiss-Prot: sp|Q9FVL0|HBL1_MEDSA Non-symbiotic hemoglobin 1; TrEMBL-Plants: tr|Q3C1F3|Q3C1F3_LOTJA Nonsymbiotic hemoglobin; Found in the gene: LotjaGi3g1v0504600 LjG1.1_chr3 92246168 92248745 -
2 domain predictions
2 GO terms
LotjaGi5g1v0024700.1
n.a. Non-symbiotic hemoglobin 1; TAIR: AT3G10520.1 hemoglobin 2; Swiss-Prot: sp|Q9FEP8|LGB_LOTJA Leghemoglobin; TrEMBL-Plants: tr|Q3C1F7|Q3C1F7_LOTJA Leghemoglobin; Found in the gene: LotjaGi5g1v0024700 LjG1.1_chr5 4294209 4295695 +
2 domain predictions
2 GO terms
LotjaGi5g1v0024900.1
n.a. Non-symbiotic hemoglobin 1; TAIR: AT3G10520.1 hemoglobin 2; Swiss-Prot: sp|Q9FEP8|LGB_LOTJA Leghemoglobin; TrEMBL-Plants: tr|Q3C1F6|Q3C1F6_LOTJA Leghemoglobin; Found in the gene: LotjaGi5g1v0024900 LjG1.1_chr5 4310694 4316382 +
2 domain predictions
2 GO terms
LotjaGi5g1v0046500.1
n.a. Non-symbiotic hemoglobin; TAIR: AT3G10520.1 hemoglobin 2; Swiss-Prot: sp|Q9FEP8|LGB_LOTJA Leghemoglobin; TrEMBL-Plants: tr|Q3C1F5|Q3C1F5_LOTJA Leghemoglobin; Found in the gene: LotjaGi5g1v0046500 LjG1.1_chr5 7873443 7877903 -
2 domain predictions
2 GO terms
LotjaGi5g1v0253200.1
n.a. Non-symbiotic hemoglobin 1; TAIR: AT3G10520.1 hemoglobin 2; Swiss-Prot: sp|P14848|LGB2_SESRO Leghemoglobin 2; TrEMBL-Plants: tr|B3SGL5|B3SGL5_MEDTR Leghemoglobin Lb120-1; Found in the gene: LotjaGi5g1v0253200 LjG1.1_chr5 56222018 56226074 +
2 domain predictions
2 GO terms