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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0180400 |
| Transcript ID | LotjaGi1g1v0180400.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Oxysterol-binding protein; TAIR: AT4G08180.2 OSBP(oxysterol binding protein)-related protein 1C; Swiss-Prot: sp|Q8L751|ORP1C_ARATH Oxysterol-binding protein-related protein 1C; TrEMBL-Plants: tr|K7M7F8|K7M7F8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0180400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:35000505..35007135) extracted from Lotus japonicus Gifu genome v1.2.
ATGCATCCTCTCTGCTGCGTCTCCGCCATCACCGACAACTCTTCTCCGGTCAAACCCTCACCGTCCGCCGGTCCCCTCGC CGGCCTCTCCATGCCTCCCTTCCCTTCCGCCGTGAGATCCGAATCGTTTCCCCGTCCCGCCGGCCACGGCCACGTCAGTC ACAGCGTCACCAACGGCGGCGACTGCAGCCGCGCGAGTCAGCAGCAGCAACAGTTGCCATCGACGTCGACTTCAGTGGCG GTGGACGTTAGGATCAACGACCTCGTCGGGAACGGAATCTCGGGGATACTGCATAAGTGGGTGAACTACGGTAAAGGATG GCGGCCACGGTGGTTCGTGCTCCAAGATGGTGTTCTCTCTTACTACAAAATTCACGGACCCGATAAGATCGTCGTCAACC CGGAAACCGAGAAGGGATCCAAGGTCATCGGCGATGAATCCATGCGTATCATCTCTCGCAACCGCAAATCTCACCGTTCC CTTCAACGAAAGCCCTTTGGTGAAATCCATCTCAAGGTTCATCCTCCATTTCCCTTTGATTTTGCTTTGCCGTTAATTTT TTATTGGATTTCATTTCATTTCGGTTTCTATTTCCATCATTAGCTTGTGATTGCTGTTGTTGTTTGCTAGAGGAAAATTT CAGTTATGAAACTAGGAATTCAGAATCCCCTAATTGTGGTTTTAATACATAAATATCTGATTTAGTATATAGAATCTTAC CCAAGAAGGGTAGCTCAGTTGGAAACGCAGGCTGAGTGTGTGGGAATAGCTCTCTGGTTCAATCCCCACACAATACACTA CACTCTGGGGGTGGGATGAGGAGCCTTAATTGTGACTAAATCCTGAATCTAGCGGCATCCAAAGGGTGACCGGGTACAGG ATGTGTATACTAAAAGTATATAGAATCTTTGATGTGGTTGCATGATAATTGATAAGGCTATTGAAATGGGGGATTCTCCT TTGTTGTTTTGCCCTGTTTGTCTTGTTTTTTCATGATATTTGTGTTTGTTATCTCAATGGAAGAAAGCTTTTAATTGTAG GTTTCGACTATCCGCGAGAGTAAATCAGATGACAAGCGCTTTTCCATTTTCACTGGGACGAAGAGACTGCACTTGAGGGC TGAGACTCGTGAGGATCGAGTGGCGTGGATGGAGGCCTTGCAGGCGGTGAAAGATATGTTCCCTCGTATGTCCAACAGTG AGTTGATGGCTCCAGTGGACAATGTGGGCATTTCAACTGAGAAACTGAGGAATCGGCTTCAGCAAGAAGGTTTAAATGAG GCAGCCATTCAGGATAGTGAGCAAATCATGAGAAATGAGTATGCAGCACTGCAAAACCAACTTCTGCTGCTCAAGCAGAA GCAGTTGATCCTAATTGACAATTTACGACAATTGGAGGTACATTTAATGAAAAGTAGCAAACGCCATGCCAATCAAACTG GCTATTCTTGTTGAATTTCTACTGCTGTCCGGAAAGCTGGTCCTTCTTAAAACTCTTTCAAATTCTCAGCAATGAAGGGG GAGGATTCTGTCTTTCTCCTTTTTGTTTAAAAGAAAGTACAGAATTGGGTTTCAACTTGTAGATATGTGAATTGTCAAGT TTTCCCCTAATTTTTGAGTTGCTCTTTTGTATATTTACATCCAAAAGCCAAAAATTAATGGCTTCTTTCTGGAGTATAAT TGATTGAATTGCAACTGCAAGTAATAATATCAGTATTCTTCAGTCAATTTCTTCCCCCTTTACTACCCAACTGGTTTGCA GCGAGCAGTTAGTCCGTATCTTTAATTCAGAATAATTAGATTAGATGTCTTAACTAGTTCTTGGGTGTCATTATCAGTGT TTTTGATGATTTAAATTTAAATATAAAACTAAAAGAATGATGCTCTGGTTAGTAGGTTTATAATATGAAGTCTCAAAACA TCTTTTATTTTCTTACTCCTTGTGATGACTTTTGAATGTATTTATAGAAGAATCCTATCAGAAATTATTCCTTCGACTTA ATATGTATCCGTTCAACTGAATGCTGTTTATCAAATTTTGATATATGTTGAATGATACACTACTGAGATATTTCTGGGTG GTGTTTATTTATCTTGCTGAAAATGTCTTCCACCAGTTAAAGGCCTTGCAATGGAGGATTGGATTGACTAATCATCAAAT ATACTATACCTAATTTTGAGTGTTCTTATGATTTGTTTATCCAGTAGTTTCTGGCGCTTTTGTTTGTTGGCCACAAGCTA GCAAATAATTAGGCAGGTATTATTTGATGATTCATTTTGCACTGAAGTATTTTCTAAATGCCCCTTCCGGAAATACAGCC TTGCTGACCTCCCTTGCCAATTGCTTGGTTAATTTGAAAGTAGAAAAAATGATTTAATATTTCTTGTCAAGCAACAAATG GATTTCACGGTTTTCCTCTTGTTAGTCAAAATGGTTTTCTATCCTTGGAGACTTCTTTGTTTGACCTTTTCTTTTGTGCT TATTTAGTTTTTATTTATTGACTTATTAATCACGGATAACATTTTATTTTCCTTGTGTAGTAATGAACTTTTATTTGTAC TTCATTATTGCAGACAGAGAAGGTTGATCTGGAGAACACTGTTGTTGATGAGAGTCAAAGACAGTTCAATGATGAAGAGG CTTCCTCTATATTAAGGCAGGAAAAATTTAGTGGTAAGTGTTTGAAGTTTGAACAATCACACATTCATATGTTTAAGATC TTTTTATTGCTTGATATGATTTTGGTTATGCATTTTCTTGAAACTAGAAAGATTTAGATGCCAGCTATTATCTTTGATGT CTGATTCCGTATGAACTCTAACCGTTTTCTTGCATTTTTTTGATCCAGAAGCAAGTGCAAGTGAGTCTGAGGATGATAAT GATAGAAATGATGCGGCAGAGGAAGAAACGGACGATGAAGACACTGCCTTTTTTGACACTCGGGATTTTCTGTCGTCATC CAATTCTTTTAAAAGTAATGGATCTGAGTTAAGGGTTTCATCTTTCTCTTCAGATGATGAAGGGCTCTTAGCAGGTGAAT CAGAAGATGATATCGACCCTTCTATTAGATCTGTTGGAACCAACTATCCTCTTGTTAAGCGGCGTAAGAAATTGCCTGAC CCTGTTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCTTTGATTAAAGATAATATTGGGAAAGATCTAACTAAAGTATGCCT TCCTGTTTATTTTAATGAGCCTCTCTCCTCTCTGCAAAAGTGTTGTGAAGAAATGGAGTATTCATATCTCCTGGACCGAG CATATGAATGGGGAAAAAAAGTAAGTAGGGAAATGACATGCGAGTTTTTTACTACCCTGCCATTTTGCGGCATATTCTTT TCTACCTGTATTGTCAATGTCGTACTTTGATTTGATATGAGAAAAGCGTATTACTTTGGTCAGTTTATATTTGTTGATAC ATCTTAGTTATTCAACGCCTTACTGGGTACATTGTTCCAACTTTTAAATTCACTGATGATGTCATGCAGGGTAATAGCCT CATGAGGATTCTCAATGTTGCTGCTTTTGCTGTATCTGCCTATGCTTCAACTGAAGGAAAAATTTGCAAACCGTTTAATC CATTACTAGGGGAGACATATGAAGCTGACTTTCCAGATAAAGGCTTTCGTTTTATCTCAGAAAAGGTCTAAACTAACCCT TCATGTTGATGTCATTAATACCTCATCTTTTCTTTTTGTATACATATATATTGTGATCATATATGTGTTAATCATGTATT ATTTGATACCATAGAACAGAGCATAGAGGAGGTGCGAGCTGCATAATGCTTTTTGTACTAAAATGTTAATGATGAGAGAA GTTTCCCCATTCCAAGGTTAGGGAATGCCACAAGCCTTAATGAATGCTCAGGACCATATTAAGAGATAAACCTATCATTT ATGGACCGCCAGCAAGAATTGAGAATGGTTTGTCTATGAGCATGGGACTGTCATTTGTGGTGGTTATATTACCATATCTG TGTTTATTAGTTGTCGAGAAATTTCGTAGGTATCAGTTATTTGAATTCCTTAGAGCCTCATGCTCCTGGACGAAAAGGAA AAGGTGTTCCTGGTATGAACAAACATTTTGATGGAAAACTCAAGTAGAATTGTGAAACTACCCCACATAAGATGAATGAA AGTTGATGTGATGTGACTGTGTTCTTAAGGCCCACAGAACCTAATGAAACATAATAGAAATTGAACTTTTACTCGACGAG TGATATGCTTATGCCTTTTACGATCTCTGTTTACAATTTCAATAATTATTATTCTGCTTGCTGTCAGGTCAGTCATCATC CTATGATAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGCGGATAGCAACTTAAAGAGCAAATTCTGGGGC CGATCAATTCAACTTGATCCTATTGGCATTTTGACTTTGGAATTTGATGATGGTGAAGTATTCCAATGGAGTAAGGTATG TTTAACTGCTTCCACTGTTACGTGTTGAATGGCCAAAATTAAAATGCTGTGCACATTTGGTACTAAACTGAAATAGACAT GTTCTTTCAGGTTACTACATCAATATACAATCTCATATTGGGAAAGCTCTATTGCGATCACTATGGTACAATGCGTATAC AGGGAAACCGAGAATACTCATGTAAACTGAAATTCAAAGAACAATCAATAATTGAACGAAATCCTCACCAGGTGCTGGAT TGTTTCTGTTCTACAGATTCTGTCTTTTCAGAGGATTGTTTTGCTATGATATATAACTTATGTGTAATATAGTATTTGAC ATGTGAAACTTTGTTGCAGAGCATACTTTCTTATTGTAGTTTACCTGCTTTTTCAGGTTCAGGGTATTGTTCAGGATAGA AATGGGAAAACATTGTCTACATTAATTGGAAAATGGGATGACAGCATGTACTATATTAATGGAGACCATGGTGGGAAGGG TAAAGGTTATGAATCATCATCAGAAGCCCATCTTCTATGGAAGCGGAGCAAGCCTCCCAAGTTTCCGACTAGATATAACT TCACTCGCTTTGCCATCACATTAAATGAACTTACCCCTGGATTAAAGGTCTCTTCTTTTAACTGATACCTTCTTTTGTGT TGCTGATCTATCTGTTTGTTTTTTTTTTGCTACCTTTTCCATGTCATTTTTAGCAAACATGGATCCTTAAATTGGAAAAA AATATTTACTTGTATCAGCAGGGGAACATTTTAACCATTTATATAATATGGAAGAGCTGAAAAGTAGTACTACCTCCGTT CCAATTTAAATGTTCAGCGAGAGAAGAAACACACATATTAAAGAGTGCAATTAATTTTGTTAATTTTCATAGAAGTATTA GTTGTTTTCCTATTTTACCCTCTAGAATGTGTTTTATCTTCATTTATTGCTCCTAACATGGGCATTATTAGGAAAAACAT CATTTAATGCCCTCTTGAAATGCTAAGTGGACAGATATATAGGAAAATGTTTTTTTATTGAAAGTTGACAGTTAATAAGG AACGGAGGTAGTAGTTTATATGTAACAAGAAAGGGACCAAAGTAGCCACATCATCAAATTCAGCATGTTGTGTGTGTTTG GCATTTGTTTAATATTGATTATCAATTGTATTCTTCACACAGGAAAAGCTGCCACCTACTGATTCCAGGTTAAGACCTGA TCAAAGGTATTTGGAAAATGGGCAGTATGAGATGGCGAATTCAGAAAAATTACGACTAGAGCAGCGACAACGGCAGGTAG ATGTTTCACTTATTTATGCATGTCATTTGTTGATTTCACTCGTAAGGTAGATTGTGTTTGATAGACATGCTATAATGTGA AAAAAACAAGATATGGAATCTATTCCATTTGTTATATTTTAAAAATAAAAGAGTTGTTAAAAAAAAGAACTGTACAATAA AACATGAGATAGAAGAATGACAGATCATGGTTCCAACAAAAAGGGTAGTAGAACCAAAGAAAACAGAAGAAAACCTTCTT GTATCATTTCACCCCATTTTATTTTGATCCCATGCCAAACTTAACCTGATATTCAGTGCATAATATCATGTCAGAATTCC TTAAATCTGACTGTCATCACCATTAGCAAGTATTCTGTGTAGTACAAACATATTTGACAAGTTGTTCCCAATGTGTGGTC TCATCTAACCTCGAGTTGGTTTGGATGAGTTTCCCATGCTTATTCCTTCTGGATCAAGCAATATTGGTTTACATCTTATA AATAAGTAAATTGAGTAGTAAGAGAAAGTTGTTGAAAATATGATTGAAGAGAAAATGTGTGTGAATGCATTAAAATTGCT ATAGGTGTCACACTGAAAGGAAGAAATAGGAGTGTTTATTGTGCTTGTCGATTTCGTGTTATATTGTGTAATTAAACCTT ATTAGTTCATGTTATTGACTTAACATTTTTATGAACTGGATTCAGGCTCGGAAGATGCAAGAGAGCGGTTGGAAACCACA GTGGTTTGCTAGGGATAAAGAAACCGGTAGCTACCGCTTCTTAGGAGGGTATTGGGAGGCCCGAAAAGAAGGAAACTGGA ACTCATGTCCTGACATTTTTGGCCAAATTCCTCCCGATCATCTTTCAGACGAAGGATAATGTACAGTGTAG
CDS sequence (LotjaGi1g1v0180400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGTATCATCTCTCGCAACCGCAAATCTCACCGTTCCCTTCAACGAAAGCCCTTTGGTGAAATCCATCTCAAGGTTTC GACTATCCGCGAGAGTAAATCAGATGACAAGCGCTTTTCCATTTTCACTGGGACGAAGAGACTGCACTTGAGGGCTGAGA CTCGTGAGGATCGAGTGGCGTGGATGGAGGCCTTGCAGGCGGTGAAAGATATGTTCCCTCGTATGTCCAACAGTGAGTTG ATGGCTCCAGTGGACAATGTGGGCATTTCAACTGAGAAACTGAGGAATCGGCTTCAGCAAGAAGGTTTAAATGAGGCAGC CATTCAGGATAGTGAGCAAATCATGAGAAATGAGTATGCAGCACTGCAAAACCAACTTCTGCTGCTCAAGCAGAAGCAGT TGATCCTAATTGACAATTTACGACAATTGGAGACAGAGAAGGTTGATCTGGAGAACACTGTTGTTGATGAGAGTCAAAGA CAGTTCAATGATGAAGAGGCTTCCTCTATATTAAGGCAGGAAAAATTTAGTGCAAGTGCAAGTGAGTCTGAGGATGATAA TGATAGAAATGATGCGGCAGAGGAAGAAACGGACGATGAAGACACTGCCTTTTTTGACACTCGGGATTTTCTGTCGTCAT CCAATTCTTTTAAAAGTAATGGATCTGAGTTAAGGGTTTCATCTTTCTCTTCAGATGATGAAGGGCTCTTAGCAGGTGAA TCAGAAGATGATATCGACCCTTCTATTAGATCTGTTGGAACCAACTATCCTCTTGTTAAGCGGCGTAAGAAATTGCCTGA CCCTGTTGAAAAAGAGAAAGGTGTCAGTCTTTGGTCTTTGATTAAAGATAATATTGGGAAAGATCTAACTAAAGTATGCC TTCCTGTTTATTTTAATGAGCCTCTCTCCTCTCTGCAAAAGTGTTGTGAAGAAATGGAGTATTCATATCTCCTGGACCGA GCATATGAATGGGGAAAAAAAGGTAATAGCCTCATGAGGATTCTCAATGTTGCTGCTTTTGCTGTATCTGCCTATGCTTC AACTGAAGGAAAAATTTGCAAACCGTTTAATCCATTACTAGGGGAGACATATGAAGCTGACTTTCCAGATAAAGGCTTTC GTTTTATCTCAGAAAAGGTCAGTCATCATCCTATGATAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGCG GATAGCAACTTAAAGAGCAAATTCTGGGGCCGATCAATTCAACTTGATCCTATTGGCATTTTGACTTTGGAATTTGATGA TGGTGAAGTATTCCAATGGAGTAAGGTTACTACATCAATATACAATCTCATATTGGGAAAGCTCTATTGCGATCACTATG GTACAATGCGTATACAGGGAAACCGAGAATACTCATGTAAACTGAAATTCAAAGAACAATCAATAATTGAACGAAATCCT CACCAGGTTCAGGGTATTGTTCAGGATAGAAATGGGAAAACATTGTCTACATTAATTGGAAAATGGGATGACAGCATGTA CTATATTAATGGAGACCATGGTGGGAAGGGTAAAGGTTATGAATCATCATCAGAAGCCCATCTTCTATGGAAGCGGAGCA AGCCTCCCAAGTTTCCGACTAGATATAACTTCACTCGCTTTGCCATCACATTAAATGAACTTACCCCTGGATTAAAGGAA AAGCTGCCACCTACTGATTCCAGGTTAAGACCTGATCAAAGGTATTTGGAAAATGGGCAGTATGAGATGGCGAATTCAGA AAAATTACGACTAGAGCAGCGACAACGGCAGGCTCGGAAGATGCAAGAGAGCGGTTGGAAACCACAGTGGTTTGCTAGGG ATAAAGAAACCGGTAGCTACCGCTTCTTAGGAGGGTATTGGGAGGCCCGAAAAGAAGGAAACTGGAACTCATGTCCTGAC ATTTTTGGCCAAATTCCTCCCGATCATCTTTCAGACGAAGGATAA
Protein sequence (LotjaGi1g1v0180400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRIISRNRKSHRSLQRKPFGEIHLKVSTIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSEL MAPVDNVGISTEKLRNRLQQEGLNEAAIQDSEQIMRNEYAALQNQLLLLKQKQLILIDNLRQLETEKVDLENTVVDESQR QFNDEEASSILRQEKFSASASESEDDNDRNDAAEEETDDEDTAFFDTRDFLSSSNSFKSNGSELRVSSFSSDDEGLLAGE SEDDIDPSIRSVGTNYPLVKRRKKLPDPVEKEKGVSLWSLIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLLDR AYEWGKKGNSLMRILNVAAFAVSAYASTEGKICKPFNPLLGETYEADFPDKGFRFISEKVSHHPMIVACHCEGTGWKFWA DSNLKSKFWGRSIQLDPIGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNREYSCKLKFKEQSIIERNP HQVQGIVQDRNGKTLSTLIGKWDDSMYYINGDHGGKGKGYESSSEAHLLWKRSKPPKFPTRYNFTRFAITLNELTPGLKE KLPPTDSRLRPDQRYLENGQYEMANSEKLRLEQRQRQARKMQESGWKPQWFARDKETGSYRFLGGYWEARKEGNWNSCPD IFGQIPPDHLSDEG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 70 | 70 | 8.353 | ||
| Gene3D | 6 | 72 | 67 | 4.2E-13 | ||
| PANTHER | 12 | 648 | 637 | 0.0 | – | |
| PANTHER | 12 | 648 | 637 | 0.0 | ||
| SUPERFAMILY | 13 | 76 | 64 | 1.61E-10 | – | |
| Pfam | 23 | 67 | 45 | 2.5E-7 | – | |
| Coils | 112 | 132 | 21 | - | – | |
| Coils | 140 | 160 | 21 | - | – | |
| MobiDBLite | 159 | 205 | 47 | - | – | |
| MobiDBLite | 187 | 203 | 17 | - | – | |
| SUPERFAMILY | 271 | 649 | 379 | 1.44E-120 | ||
| Pfam | 276 | 628 | 353 | 4.6E-127 | ||
| Gene3D | 362 | 529 | 168 | 7.1E-26 | – | |
| Coils | 581 | 601 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0180400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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