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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0197100 |
Transcript ID | LotjaGi1g1v0197100.2 |
Related isoforms 5 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT3G27560.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1; TrEMBL-Plants: tr|I1KCB5|I1KCB5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0197100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:39868570..39871915) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAATCTGGTGATAGTTTCTACTCAGTTGATGAGTTCAAATTGGACAAAAAATGGCTGATTGATCCTCACCATCTCTA TGTTGGGCCACGAATTGGAGAAGGAGCTCATGCCAAAGTCTATGAAGGAAAGTAAGTTCATATCTTGAAACCCCATTTGC TATTTGGTTGGTGTGTAATTATATTTTCTATCTTTACATAGTTAACAATTGCATATTCTGATTATGGCTTTTGTTTTAGG GAATTAGTGCATCCATTGTTGTCGCGTGTGTGATTTGTAAAGCATCATAATTTTTAGCTTAATGCATTGCTTAGGCTATG CATTTTACATACATAATTGCTTTGAAGTTTGGTTGAACTTCAGCTTCATTTCTACAATAATCATCATGGACCTGAATTAT AGCTTGATCATTTTCTTTTTCTTTAGAATCAATTCTGACACCTAGAAGCCACTCACAGAAACTCCTCTTAAAAATTGATT TTGCCTTCAGAATCAATTGTATAGTGATTTACAAACATGCACCTAGGCTTCTCTGATCTGAATTATAAATTTTTATTTTC TTGTTTAATCTTGTTGATAATGCCATTCCTATTATTAGTTTTTTTGCTGGGTTTGTTTCAGATATAAAAACCAGACTGTT GCTATTAAAATTGTACAGAAAGGAGAAACTGCAGAAGACATCGTCAAGAGAGAAGGGCGCTTTGCAAGGGAGGTGGCTAT GTTGTCAAGAGTGCAACATAAGAACTTGGTGAAGGTGGGAATTTGGTTTAGGATCTCGCTGATTCTTTCCCCTTGTGTCT GCTGTATGTTATTGAAGCAAAAAATAGATACTTCATATAACAAGGACTACTTGTTAGTTAGTTATATGCCCAGTTTCCAA CAGCTGACAGTAAATATTGTCACTCTATTTCTCAACAGTTTATTGGTGCCTGCAAGGAGCCAGTAATGGTGATAGTGACT GAGTTGTTATTAGGAGGAACGTTGCGTAAGTATTTACTAAACATGCGCCCCAAATGCTTGGATACACATGTTGCCATTGG TTTTGCGCTTGATATTGCACGTGCTATGGAATGCCTACATTCTCATGGGATCATACACCGTGATCTTAAGCCGGGTAATA ATTTGCTTTGCTTTCCAAATGAATAACTGATTTTTAGGTCAGATCCAGTAAATGTAGGCTTGTATTCTCTGTATTTCATG TTGATGTTGCATAGCTGAGAAATCATAAGTGGTATAGCAGCAGTGTTCTACGACATGATTTCTGTAGTATCTGCTCTCTG ACTTCCCTTCAAAATGAATTTCATACCCAAATTGCTATTCATTTTATACTAAATTGACGTTGCCCAAATACGAATCTATA TATTTCTTTTCTTCTTTTATTTGTAGTTGCATTTACAGATTACATTATCTCCCATTGTTAGAATTCAGGTGCGAAAATAT ATGACATTGTGGTTTCAAGTTACTCCCTCCGTTCCAAAACTATTGTAGTTTAAGGTTGTGCACAAAGTTTAGGAGTTTAT TAATTGATGTTATAATTTGACTAAAACACCCTTATTTAATTAGTTATGTGAAAGAGAGAGAATGAAAATCATTGCTCAAC TAATTGGTGAGAATTGTGATCGGTGGAAATAAAAGGTGGTACATGGGAGATACAATAGTAAATGAGGGCATGAATGGAAG AGAATGAGATAAAGTGCTTTGGATATGTAAAACAACAATGATTTTGGAACAAAACAAAAAAACTAAAACTACAATAGTTT TGGAACGGAGGGAGTACTATCTTTCCGAACATGGTTGTCACTTGTCACTTGTCACACATGGTTGTCATTCCTATTTATTT GCTCTAAGAGAGATGAAAAAGTTTGTTCCTAATTATTATTTTCTCAATCATATCCTTATGTCCACCTAGTAATTTTCAGG TATAGTTAAGTTTTATTGTTAAGCCTATGCTTGTATGTAACTTTCTATTTCCGGTCCGCCTATGCTTGCATGGCCAGTCC AAGTCCGGGTGAAGGAAGAGGATTGTGTTAGGCCTCGGAAGGCAACTTAAAACTAGTCAATATCTTCAAGATGGATCAAA CACTACAGTAAAGTCCCATTGTTGAGTAATCCAAAGGTCAAAGGGTAAAATAGAAAGTTCAGAAATAATTTTAACAAATT AATTGTATTTCTTAGTCTGCGTAGTTTCTTCTCTCTCTGAACAGATAAATAGGAACAGAAGTAGTACTTGTGTGTATCTT AGTTCAAGTAAGCCTGAAACAACTTTGAAGACTAGTACTTCTTGTATGTTGATTATTGGCACTGAATTGATAAGTTGTTA TCTACATTAGCAAATAGATTTACAATCTTCATTGAGACAAGAAGTAAGTTTTTTTTTTTTTTTTTCTTTTTAAATAGTGC AATATATGATGATGACTGCCAGGATTTGTTCTATTCTGTTCTTGTCATACAATAATATCATGTCTGTCTAAAAAAGTGTT ATCCTTATTTTTCATCCTCCTCCTTCCTCCAACTCTGTCCTATCTGCTACGATTGAGATCATATAATTAAAAAAATTATA CTTCAAAGAACAAGCTTTTATTGTTGCTTCCCTTCTGAACTCTCTCTCTCTGTTTTTTCAAGTTGCTGTTGATTAATATG TAAAACTGGATCCAAGTGCTCCACTGACCACTAACTTCACTTACTCTTTGATCCTTGATAATATACCTCATTATTTCCTT TGTAAGGAGTTGGACAAGTGACCATTTATGCACAATTGATCTTGGGAAAAGTTACATATGGTAGCACAGGTCATATAATT TTTGTTAAACACTAATTAACTGCCATGGCAATAAAAAATGAGTATTTTATTCATGATCTGATATTAGTTGTTCAGTGCTG AAGCTTCCATCCCTCAAATTTATAACTTCCCCTAGTGTAAAACATGTGCATAATGGATATGAAGATTATTCTCTTCTCCT TTGTACAGATAACTTGTTATTGACTGAAGACCAGAAAACAGTCAAGCTAGCAGATTTTGGTTTAGCAAGAGAAGAGTCCT TAACTGAGATGATGACTGCCGAAACAGGAACTTACCGTTGGATGGCTCCGGAGGTATGATGACGAACAGATATGCTTTCA GTGTCTTGTCAATTTTTTGAGCATGTGGACTGACTGCATTGACAAAAAATTGCAGTTGTATAGTACTGTCACACTGAGGC AGGGGGAGAAGAAGCATTACAACCATAAAGTCGATGCTTATAGTTTCGCAATCGTGTTTTGGGAGCTCTTACACAACAAA GTTCCTTTTGAAGGCATGTCAAACCTACAGGCAGCATATGCTGCAGCCTTTAAGGTAAAAAGATGA
CDS sequence (LotjaGi1g1v0197100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATCTGGTGATAGTTTCTACTCAGTTGATGAGTTCAAATTGGACAAAAAATGGCTGATTGATCCTCACCATCTCTA TGTTGGGCCACGAATTGGAGAAGGAGCTCATGCCAAAGTCTATGAAGGAAAATATAAAAACCAGACTGTTGCTATTAAAA TTGTACAGAAAGGAGAAACTGCAGAAGACATCGTCAAGAGAGAAGGGCGCTTTGCAAGGGAGGTGGCTATGTTGTCAAGA GTGCAACATAAGAACTTGGTGAAGTTTATTGGTGCCTGCAAGGAGCCAGTAATGGTGATAGTGACTGAGTTGTTATTAGG AGGAACGTTGCGTAAGTATTTACTAAACATGCGCCCCAAATGCTTGGATACACATGTTGCCATTGGTTTTGCGCTTGATA TTGCACGTGCTATGGAATGCCTACATTCTCATGGGATCATACACCGTGATCTTAAGCCGGATAACTTGTTATTGACTGAA GACCAGAAAACAGTCAAGCTAGCAGATTTTGGTTTAGCAAGAGAAGAGTCCTTAACTGAGATGATGACTGCCGAAACAGG AACTTACCGTTGGATGGCTCCGGAGTTGTATAGTACTGTCACACTGAGGCAGGGGGAGAAGAAGCATTACAACCATAAAG TCGATGCTTATAGTTTCGCAATCGTGTTTTGGGAGCTCTTACACAACAAAGTTCCTTTTGAAGGCATGTCAAACCTACAG GCAGCATATGCTGCAGCCTTTAAGGTAAAAAGATGA
Protein sequence (LotjaGi1g1v0197100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESGDSFYSVDEFKLDKKWLIDPHHLYVGPRIGEGAHAKVYEGKYKNQTVAIKIVQKGETAEDIVKREGRFAREVAMLSR VQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPKCLDTHVAIGFALDIARAMECLHSHGIIHRDLKPDNLLLTE DQKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVFWELLHNKVPFEGMSNLQ AAYAAAFKVKR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 249 | 249 | 4.3E-150 | – | |
PANTHER | 1 | 249 | 249 | 4.3E-150 | – | |
Gene3D | 8 | 105 | 98 | 2.7E-23 | – | |
PIRSF | 11 | 251 | 241 | 1.4E-42 | – | |
SUPERFAMILY | 14 | 243 | 230 | 4.59E-64 | ||
ProSiteProfiles | 26 | 251 | 226 | 38.916 | ||
SMART | 26 | 248 | 223 | 2.3E-40 | ||
Pfam | 31 | 240 | 210 | 2.2E-48 | ||
CDD | 32 | 251 | 220 | 3.93246E-93 | – | |
ProSitePatterns | 32 | 53 | 22 | - | ||
Gene3D | 106 | 251 | 146 | 5.1E-42 | – | |
ProSitePatterns | 146 | 158 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0197100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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