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LotjaGi1g1v0197100.3

Overview

Field Value
Gene ID LotjaGi1g1v0197100
Transcript ID LotjaGi1g1v0197100.3
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT3G27560.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1; TrEMBL-Plants: tr|I1KCB5|I1KCB5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0197100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:39868570..39872203) extracted from Lotus japonicus Gifu genome v1.2.

ATGGAATCTGGTGATAGTTTCTACTCAGTTGATGAGTTCAAATTGGACAAAAAATGGCTGATTGATCCTCACCATCTCTA TGTTGGGCCACGAATTGGAGAAGGAGCTCATGCCAAAGTCTATGAAGGAAAGTAAGTTCATATCTTGAAACCCCATTTGC TATTTGGTTGGTGTGTAATTATATTTTCTATCTTTACATAGTTAACAATTGCATATTCTGATTATGGCTTTTGTTTTAGG GAATTAGTGCATCCATTGTTGTCGCGTGTGTGATTTGTAAAGCATCATAATTTTTAGCTTAATGCATTGCTTAGGCTATG CATTTTACATACATAATTGCTTTGAAGTTTGGTTGAACTTCAGCTTCATTTCTACAATAATCATCATGGACCTGAATTAT AGCTTGATCATTTTCTTTTTCTTTAGAATCAATTCTGACACCTAGAAGCCACTCACAGAAACTCCTCTTAAAAATTGATT TTGCCTTCAGAATCAATTGTATAGTGATTTACAAACATGCACCTAGGCTTCTCTGATCTGAATTATAAATTTTTATTTTC TTGTTTAATCTTGTTGATAATGCCATTCCTATTATTAGTTTTTTTGCTGGGTTTGTTTCAGATATAAAAACCAGACTGTT GCTATTAAAATTGTACAGAAAGGAGAAACTGCAGAAGACATCGTCAAGAGAGAAGGGCGCTTTGCAAGGGAGGTGGCTAT GTTGTCAAGAGTGCAACATAAGAACTTGGTGAAGGTGGGAATTTGGTTTAGGATCTCGCTGATTCTTTCCCCTTGTGTCT GCTGTATGTTATTGAAGCAAAAAATAGATACTTCATATAACAAGGACTACTTGTTAGTTAGTTATATGCCCAGTTTCCAA CAGCTGACAGTAAATATTGTCACTCTATTTCTCAACAGTTTATTGGTGCCTGCAAGGAGCCAGTAATGGTGATAGTGACT GAGTTGTTATTAGGAGGAACGTTGCGTAAGTATTTACTAAACATGCGCCCCAAATGCTTGGATACACATGTTGCCATTGG TTTTGCGCTTGATATTGCACGTGCTATGGAATGCCTACATTCTCATGGGATCATACACCGTGATCTTAAGCCGGGTAATA ATTTGCTTTGCTTTCCAAATGAATAACTGATTTTTAGGTCAGATCCAGTAAATGTAGGCTTGTATTCTCTGTATTTCATG TTGATGTTGCATAGCTGAGAAATCATAAGTGGTATAGCAGCAGTGTTCTACGACATGATTTCTGTAGTATCTGCTCTCTG ACTTCCCTTCAAAATGAATTTCATACCCAAATTGCTATTCATTTTATACTAAATTGACGTTGCCCAAATACGAATCTATA TATTTCTTTTCTTCTTTTATTTGTAGTTGCATTTACAGATTACATTATCTCCCATTGTTAGAATTCAGGTGCGAAAATAT ATGACATTGTGGTTTCAAGTTACTCCCTCCGTTCCAAAACTATTGTAGTTTAAGGTTGTGCACAAAGTTTAGGAGTTTAT TAATTGATGTTATAATTTGACTAAAACACCCTTATTTAATTAGTTATGTGAAAGAGAGAGAATGAAAATCATTGCTCAAC TAATTGGTGAGAATTGTGATCGGTGGAAATAAAAGGTGGTACATGGGAGATACAATAGTAAATGAGGGCATGAATGGAAG AGAATGAGATAAAGTGCTTTGGATATGTAAAACAACAATGATTTTGGAACAAAACAAAAAAACTAAAACTACAATAGTTT TGGAACGGAGGGAGTACTATCTTTCCGAACATGGTTGTCACTTGTCACTTGTCACACATGGTTGTCATTCCTATTTATTT GCTCTAAGAGAGATGAAAAAGTTTGTTCCTAATTATTATTTTCTCAATCATATCCTTATGTCCACCTAGTAATTTTCAGG TATAGTTAAGTTTTATTGTTAAGCCTATGCTTGTATGTAACTTTCTATTTCCGGTCCGCCTATGCTTGCATGGCCAGTCC AAGTCCGGGTGAAGGAAGAGGATTGTGTTAGGCCTCGGAAGGCAACTTAAAACTAGTCAATATCTTCAAGATGGATCAAA CACTACAGTAAAGTCCCATTGTTGAGTAATCCAAAGGTCAAAGGGTAAAATAGAAAGTTCAGAAATAATTTTAACAAATT AATTGTATTTCTTAGTCTGCGTAGTTTCTTCTCTCTCTGAACAGATAAATAGGAACAGAAGTAGTACTTGTGTGTATCTT AGTTCAAGTAAGCCTGAAACAACTTTGAAGACTAGTACTTCTTGTATGTTGATTATTGGCACTGAATTGATAAGTTGTTA TCTACATTAGCAAATAGATTTACAATCTTCATTGAGACAAGAAGTAAGTTTTTTTTTTTTTTTTTCTTTTTAAATAGTGC AATATATGATGATGACTGCCAGGATTTGTTCTATTCTGTTCTTGTCATACAATAATATCATGTCTGTCTAAAAAAGTGTT ATCCTTATTTTTCATCCTCCTCCTTCCTCCAACTCTGTCCTATCTGCTACGATTGAGATCATATAATTAAAAAAATTATA CTTCAAAGAACAAGCTTTTATTGTTGCTTCCCTTCTGAACTCTCTCTCTCTGTTTTTTCAAGTTGCTGTTGATTAATATG TAAAACTGGATCCAAGTGCTCCACTGACCACTAACTTCACTTACTCTTTGATCCTTGATAATATACCTCATTATTTCCTT TGTAAGGAGTTGGACAAGTGACCATTTATGCACAATTGATCTTGGGAAAAGTTACATATGGTAGCACAGGTCATATAATT TTTGTTAAACACTAATTAACTGCCATGGCAATAAAAAATGAGTATTTTATTCATGATCTGATATTAGTTGTTCAGTGCTG AAGCTTCCATCCCTCAAATTTATAACTTCCCCTAGTGTAAAACATGTGCATAATGGATATGAAGATTATTCTCTTCTCCT TTGTACAGATAACTTGTTATTGACTGAAGACCAGAAAACAGTCAAGCTAGCAGATTTTGGTTTAGCAAGAGAAGAGTCCT TAACTGAGATGATGACTGCCGAAACAGGAACTTACCGTTGGATGGCTCCGGAGGTATGATGACGAACAGATATGCTTTCA GTGTCTTGTCAATTTTTTGAGCATGTGGACTGACTGCATTGACAAAAAATTGCAGTTGTATAGTACTGTCACACTGAGGC AGGGGGAGAAGAAGCATTACAACCATAAAGTCGATGCTTATAGTTTCGCAATCGTGTTTTGGGAGCTCTTACACAACAAA GTTCCTTTTGAAGGCATGTCAAACCTACAGGCAGCATATGCTGCAGCCTTTAAGGTAAAAAGATGAGTTAAATATGTTTT AGGTCCCTGTAAATTAAGTGAGATTTTCTGTTTTAGTCCCTTGCTGGAGTAAAGTTGCAAAAACACCACTACAATTAGAG AAATAGCCTAGTTTTAGTCATGGCCTGAGCCGGAGCTCTGGCAACCTTACCGTGTGTGCGGTCAGGCGTTATGTGACACA CCACTTGGAATGCCACATCTTAAAAAATAATTCCACATGGCGTGCCACATCAGGCATACACATGGCAATGTCGTCGGAAC TCCAACACAGGCGATGATACAAACTAGACTATTT
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0197100.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAATCTGGTGATAGTTTCTACTCAGTTGATGAGTTCAAATTGGACAAAAAATGGCTGATTGATCCTCACCATCTCTA TGTTGGGCCACGAATTGGAGAAGGAGCTCATGCCAAAGTCTATGAAGGAAAATATAAAAACCAGACTGTTGCTATTAAAA TTGTACAGAAAGGAGAAACTGCAGAAGACATCGTCAAGAGAGAAGGGCGCTTTGCAAGGGAGGTGGCTATGTTGTCAAGA GTGCAACATAAGAACTTGGTGAAGTTTATTGGTGCCTGCAAGGAGCCAGTAATGGTGATAGTGACTGAGTTGTTATTAGG AGGAACGTTGCGTAAGTATTTACTAAACATGCGCCCCAAATGCTTGGATACACATGTTGCCATTGGTTTTGCGCTTGATA TTGCACGTGCTATGGAATGCCTACATTCTCATGGGATCATACACCGTGATCTTAAGCCGGATAACTTGTTATTGACTGAA GACCAGAAAACAGTCAAGCTAGCAGATTTTGGTTTAGCAAGAGAAGAGTCCTTAACTGAGATGATGACTGCCGAAACAGG AACTTACCGTTGGATGGCTCCGGAGTTGTATAGTACTGTCACACTGAGGCAGGGGGAGAAGAAGCATTACAACCATAAAG TCGATGCTTATAGTTTCGCAATCGTGTTTTGGGAGCTCTTACACAACAAAGTTCCTTTTGAAGGCATGTCAAACCTACAG GCAGCATATGCTGCAGCCTTTAAGGCATACACATGGCAATGTCGTCGGAACTCCAACACAGGCGATGATACAAACTAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0197100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MESGDSFYSVDEFKLDKKWLIDPHHLYVGPRIGEGAHAKVYEGKYKNQTVAIKIVQKGETAEDIVKREGRFAREVAMLSR VQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPKCLDTHVAIGFALDIARAMECLHSHGIIHRDLKPDNLLLTE DQKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVFWELLHNKVPFEGMSNLQ AAYAAAFKAYTWQCRRNSNTGDDTN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23257
1 249 249 3.9E-150 –
PANTHER
PTHR23257:SF806
1 249 249 3.9E-150 –
Gene3D
G3DSA:3.30.200.20
8 105 98 3.0E-23 –
PIRSF
PIRSF000654
11 257 247 2.1E-42 –
SUPERFAMILY
SSF56112
16 252 237 2.16E-64
IPR011009
SMART
SM00220
26 265 240 3.4E-42
IPR000719
ProSiteProfiles
PS50011
26 265 240 38.52
IPR000719
Pfam
PF00069
31 241 211 1.9E-48
IPR000719
CDD
cd13999
32 240 209 1.46762E-90 –
ProSitePatterns
PS00107
32 53 22 -
IPR017441
Gene3D
G3DSA:1.10.510.10
106 262 157 4.1E-42 –
ProSitePatterns
PS00108
146 158 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0197100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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