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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0201400 |
| Transcript ID | LotjaGi1g1v0201400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SOUL heme-binding family protein; TAIR: AT5G20140.2 SOUL heme-binding family protein; Swiss-Prot: sp|Q9SR77|HBPL1_ARATH Heme-binding-like protein At3g10130, chloroplastic; TrEMBL-Plants: tr|A0A0R0JK90|A0A0R0JK90_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0201400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:42634230..42637124) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCCACTTCCATCCTTTCCCCCAAAATTCCCCGGCCATTTCCCACGGCCTACGTCAGTTACCGGCGGCCACCAAGCGC CGCCGTTAGCAACCAGCGCCACCCTCCATCTCTCAAACCACCGGCACTCAACACTCGCTTCAATTGGGCCATTAAACTGA GCTTAGCGGAGCAGAGCCCACCAAAATCAACTGAGTTTGATATGCAGCGACTCGTGCAGTTTCTCTATGACGATCTTCCC CACCTCTTCGATGACCAGGGCATTGACAAAACCGCCTACGACGAACGCGTCTTCTTTCGAGACCCAATCACCAAGCATGA TAGCTTGAGTGGCTACCTTTTCAACATCGCTTTTCTCAAAACAATCTTTCGTCCTCAGTTTCAGTTACATTGGGTCAAAC CGGTCTGTTCTTCTTTTTTTCCTTCTTTCTATTTCTAGTTCATGTAACATGTTATTTTATTCTATATGATTATAGAACGC CAAATAGAATGAGATAGAATACGGACATTTCAAATCATGAGCGGAATAATTAGGACTGAAGTCTGAGTGATCTCGGTTAG TTAATTAGTAAAGTAACTGCAAGTGATTAAGGCTTCCTCTCTATCTCACACCCTCTTTCACAACTGTTGAGGGGTCAAGT GACCGGTTTACCTCTCATTTTCCGCAAGTTAGGGCATGTGTGGTTCTTCAAGTTAGTAACTCAAGAACCACTTTTAAAAA GAATTTCGTGATTTAGGAAAAAATTTACTGACCTCTAGTTTTTTTGTTTTTAGATAGACAAATGTTAGTTATTAGTAAAT TAGTACCCCCTCCGTTGTTTCACAATAACTAACTGTCCACTTAGAATTCCAATGAAGCGTTAATAAATGTTTTTACATAT AATGCACCAATGAAAACAATAAATGAGAAGAGATAAAAGTACATTGTAAAGGGTAAAATAGGGAAACAAATGATATGTTT TAAAAAGTTAACAAAATTAATTGTATTTCTTAATATGTGAGTATCTTCTCTAAGTGGACAATTATATTGAAAATGGAGGG ACTCCTCAGGATTCGAACCCTGACCCTTCACCTACAATTACCCTTAGCTCAATCATGTGAGCTCCTCCCATCCCCTACAG GCCTCTAGTAGTAGGTGTTCCTCAAATTGAAATGATGACGCTGATCATGATTAGTTAATTGTTCATTTTCTAAATTAAAT TAGAAAATAAAAAACTGTTACTAAGACAAAGTTTTTGTTGAGTACTGATGTAGTAGTACTGAATAATTGATTCGTGCTCT AGATCAGGGCTTTAAATTGCGGTTGTGGCTGACAAATGCGGATTGAAACAACTGCACTTGTGGTCGTGTCATGTTGCTGC CCCAATTGCGGACGGAAATATGAACCCTGCTGTAGATTATGTGTTTAGCTGCAATCCAAACATGCTATTAGTGTTGTCTC TCCCTCTCATTTTTGTTATATTGGACTGATTTAGTTGCTATAGACAGGACCTCATGAGATAACAACAAGATGGACCATGG TTATGAAATTCGGGCTACTTCCCTGGAAACCGGAATTGGTCTTCACCGGGACATCCGTTATGGGAATTAACCCAGAAAAT GGCAAGTTCTGTAGCCATGTGGTAGGTTCCAGCTTTTTTGCTAGTTTTCAAAATGGAGAGATATTACTACTTTTGAATTG GGATATAACATCTTATCCTTAATTTCCCTTCCAGGACTTCTGGGATTCAATACAGAAAAATGAGTATTTTTCTTTTGAAG GTTTGTTGGATATGATCAAACAGGTACCCTTCTATTTCACTTCTTTTGATGTATGTCTCTAAAATTCTTTCTCTCAAAAG TCTTCCGAAATCCATAGTGACTGAGATGATTTGAATCTTTGCAGTTGAGGATTTATAAGACACCGGAATTGGAATCACCC AAGTATCAAATATTGAAAAGGACAGCAAATTATGAGGTCAATCTCAGCATTCATCAACATACTACTTTTGAATTGATCCA TTATACTATCCATAAATCTGACATACTAATCTGTTCTATAATGAAACAACAAGAGGATTGCATCAATGCACTTATCTAAA GGTGAAGCTCATGTTTTGTTATTGAAATTATGTGACTAGAACAGGTTAGACAATATAATCCGTTCATAGTGGTAGAAACA ATCGGAGACAAGCTATCTGGAAATACTGGCTTTAATGATGTTGCAGGGTATGATTTTTATTTTTATCAAAAAAAGTTGTT ATTTGTTCTTAGGCTCTCAGTCTCATATAATACATACATGTATATAATCCACCCACGCAGGTATATATTTGGAAAGAATT CCACTGCAGAGAAGATACCAATGACTACTCCTGTCTTCACTCAAGCCATTGATCCAGATTTGTCAAAAGTGTCAATCCAA ATAGTTCTTCCATTAGACAAAAAAACAGAAAGGTATGTCTATCTTGTTTCACTGGTTTCAGTATTTGAAGAACTTTTGTT CTAAGAGAAGCATCTCTTAGCTTGTAAAGAAATGTAATTATATAGAAAAAATACAAAGAGAAAAATGTGTACTATGACTA TTTTTAGTTTGCATTGTAGATTTGTTCTAACTATTTAGTCTTTTGACCAGTTTACCAAATCCTAATCAAGAAACAATTCG CTTGAGAAAAGTAGAAGGAGGCATTGCTGCAGTAATAAAGTTTAGTGGAAAACCCACAGAAGATGTCGTTCGTGAAAAGG AGAAAACTTTGCGCTCCAATATTATGAAAGATGGTCTTAAACCTGAGCTTGGTTGTTTGCTTGCACGGTACAATGATCCA GGTCGAACATGGACCTTCACAATGGTATGCTACAAAACCAGCTTAAGTATTGTCGACTGATTTCTATTATGCATGACATG ATGCTTCTACTATAA
CDS sequence (LotjaGi1g1v0201400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCACTTCCATCCTTTCCCCCAAAATTCCCCGGCCATTTCCCACGGCCTACGTCAGTTACCGGCGGCCACCAAGCGC CGCCGTTAGCAACCAGCGCCACCCTCCATCTCTCAAACCACCGGCACTCAACACTCGCTTCAATTGGGCCATTAAACTGA GCTTAGCGGAGCAGAGCCCACCAAAATCAACTGAGTTTGATATGCAGCGACTCGTGCAGTTTCTCTATGACGATCTTCCC CACCTCTTCGATGACCAGGGCATTGACAAAACCGCCTACGACGAACGCGTCTTCTTTCGAGACCCAATCACCAAGCATGA TAGCTTGAGTGGCTACCTTTTCAACATCGCTTTTCTCAAAACAATCTTTCGTCCTCAGTTTCAGTTACATTGGGTCAAAC CGACAGGACCTCATGAGATAACAACAAGATGGACCATGGTTATGAAATTCGGGCTACTTCCCTGGAAACCGGAATTGGTC TTCACCGGGACATCCGTTATGGGAATTAACCCAGAAAATGGCAAGTTCTGTAGCCATGTGGACTTCTGGGATTCAATACA GAAAAATGAGTATTTTTCTTTTGAAGGTTTGTTGGATATGATCAAACAGTTGAGGATTTATAAGACACCGGAATTGGAAT CACCCAAGTATCAAATATTGAAAAGGACAGCAAATTATGAGGTTAGACAATATAATCCGTTCATAGTGGTAGAAACAATC GGAGACAAGCTATCTGGAAATACTGGCTTTAATGATGTTGCAGGGTATATATTTGGAAAGAATTCCACTGCAGAGAAGAT ACCAATGACTACTCCTGTCTTCACTCAAGCCATTGATCCAGATTTGTCAAAAGTGTCAATCCAAATAGTTCTTCCATTAG ACAAAAAAACAGAAAGTTTACCAAATCCTAATCAAGAAACAATTCGCTTGAGAAAAGTAGAAGGAGGCATTGCTGCAGTA ATAAAGTTTAGTGGAAAACCCACAGAAGATGTCGTTCGTGAAAAGGAGAAAACTTTGCGCTCCAATATTATGAAAGATGG TCTTAAACCTGAGCTTGGTTGTTTGCTTGCACGGTACAATGATCCAGGTCGAACATGGACCTTCACAATGGTATGCTACA AAACCAGCTTAAGTATTGTCGACTGA
Protein sequence (LotjaGi1g1v0201400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATSILSPKIPRPFPTAYVSYRRPPSAAVSNQRHPPSLKPPALNTRFNWAIKLSLAEQSPPKSTEFDMQRLVQFLYDDLP HLFDDQGIDKTAYDERVFFRDPITKHDSLSGYLFNIAFLKTIFRPQFQLHWVKPTGPHEITTRWTMVMKFGLLPWKPELV FTGTSVMGINPENGKFCSHVDFWDSIQKNEYFSFEGLLDMIKQLRIYKTPELESPKYQILKRTANYEVRQYNPFIVVETI GDKLSGNTGFNDVAGYIFGKNSTAEKIPMTTPVFTQAIDPDLSKVSIQIVLPLDKKTESLPNPNQETIRLRKVEGGIAAV IKFSGKPTEDVVREKEKTLRSNIMKDGLKPELGCLLARYNDPGRTWTFTMVCYKTSLSIVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 30 | 370 | 341 | 3.4E-169 | – | |
| PANTHER | 30 | 370 | 341 | 3.4E-169 | ||
| Pfam | 70 | 179 | 110 | 5.3E-26 | ||
| SUPERFAMILY | 81 | 184 | 104 | 6.53E-7 | ||
| SUPERFAMILY | 203 | 366 | 164 | 9.94E-38 | ||
| Gene3D | 208 | 370 | 163 | 2.9E-31 | ||
| Pfam | 212 | 363 | 152 | 1.4E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0201400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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