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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011256
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.822s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0112289.1
n.a. Heme-binding-like protein [Medicago truncatula] gi|357450683|ref|XP_003595618.1| chr0 48833039 48837239 -
2 domain predictions
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Lj0g3v0245369.1
n.a. PREDICTED: heme-binding-like protein At3g10130, chloroplastic-like [Cicer arietinum] gi|502146870|ref|XP_004506644.1| chr0 127156345 127157603 -
2 domain predictions
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Lj0g3v0245379.1
n.a. Heme-binding-like protein [Medicago truncatula] gi|357469073|ref|XP_003604821.1| chr0 127156629 127157403 -
2 domain predictions
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Lj0g3v0308669.1
n.a. PREDICTED: heme-binding protein 1-like [Cicer arietinum] gi|502152353|ref|XP_004508887.1| chr0 161181972 161183045 +
2 domain predictions
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Lj1g3v0352050.1
n.a. PREDICTED: heme-binding protein 2-like [Glycine max] gi|356498208|ref|XP_003517945.1| chr1 4129388 4131313 +
2 domain predictions
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Lj1g3v4717320.1
n.a. PREDICTED: heme-binding-like protein At3g10130, chloroplastic-like [Glycine max] gi|356572562|ref|XP_003554437.1| chr1 56254135 56257848 +
2 domain predictions
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Lj5g3v1670370.1
n.a. PREDICTED: heme-binding protein 1-like [Cicer arietinum] gi|502152353|ref|XP_004508887.1| chr5 23842208 23842744 -
2 domain predictions
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LotjaGi1g1v0178100.1
n.a. Heme-binding protein, putative; TAIR: AT1G17100.1 SOUL heme-binding family protein; Swiss-Prot: sp|Q9Y5Z4|HEBP2_HUMAN Heme-binding protein 2; TrEMBL-Plants: tr|I3T2Y8|I3T2Y8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0178100 LjG1.1_chr1 34099946 34101964 -
3 domain predictions
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LotjaGi1g1v0201400.1
n.a. SOUL heme-binding family protein; TAIR: AT5G20140.1 SOUL heme-binding family protein; Swiss-Prot: sp|Q9SR77|HBPL1_ARATH Heme-binding-like protein At3g10130, chloroplastic; TrEMBL-Plants: tr|A0A0B2Q1X0|A0A0B2Q1X0_GLYSO Heme-binding-like protein, chloroplastic; Found in the gene: LotjaGi1g1v0201400 LjG1.1_chr1 42633945 42639113 +
3 domain predictions
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LotjaGi1g1v0201400.2
n.a. SOUL heme-binding family protein; TAIR: AT5G20140.2 SOUL heme-binding family protein; Swiss-Prot: sp|Q9SR77|HBPL1_ARATH Heme-binding-like protein At3g10130, chloroplastic; TrEMBL-Plants: tr|A0A0R0JK90|A0A0R0JK90_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0201400 LjG1.1_chr1 42634230 42637124 +
3 domain predictions
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LotjaGi1g1v0675700.1
n.a. SOUL heme-binding family protein; TAIR: AT3G10130.1 SOUL heme-binding family protein; Swiss-Prot: sp|Q9SR77|HBPL1_ARATH Heme-binding-like protein At3g10130, chloroplastic; TrEMBL-Plants: tr|A0A151TVP2|A0A151TVP2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0675700 LjG1.1_chr1 124277922 124283206 -
3 domain predictions
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LotjaGi3g1v0217700.1
n.a. SOUL heme-binding family protein; TAIR: AT2G37970.1 SOUL heme-binding family protein; Swiss-Prot: sp|Q9SR77|HBPL1_ARATH Heme-binding-like protein At3g10130, chloroplastic; TrEMBL-Plants: tr|G7JRA5|G7JRA5_MEDTR SOUL heme-binding family protein; Found in the gene: LotjaGi3g1v0217700 LjG1.1_chr3 32821815 32823341 -
3 domain predictions
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LotjaGi4g1v0156500.1
n.a. Heme-binding protein, putative; TAIR: AT1G17100.1 SOUL heme-binding family protein; Swiss-Prot: sp|Q6NU05|HEBP1_XENLA Heme-binding protein 1; TrEMBL-Plants: tr|A0A072TS05|A0A072TS05_MEDTR SOUL heme-binding family protein; Found in the gene: LotjaGi4g1v0156500 LjG1.1_chr4 27226001 27234817 -
3 domain predictions
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LotjaGi4g1v0231400.1
n.a. Heme-binding protein, putative; TAIR: AT1G17100.1 SOUL heme-binding family protein; Swiss-Prot: sp|Q9Y5Z4|HEBP2_HUMAN Heme-binding protein 2; TrEMBL-Plants: tr|I3SE15|I3SE15_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0231400 LjG1.1_chr4 54274709 54275823 +
3 domain predictions
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