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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0212200 |
| Transcript ID | LotjaGi1g1v0212200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | zinc finger CCCH domain protein; TAIR: AT3G26850.1 histone-lysine N-methyltransferase; Swiss-Prot: sp|Q6YYC0|C3H55_ORYSJ Zinc finger CCCH domain-containing protein 55; TrEMBL-Plants: tr|A0A0R0KFJ4|A0A0R0KFJ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0212200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:46725743..46733388) extracted from Lotus japonicus Gifu genome v1.2.
CGCTTTGGGGAAGTTCTTGTTTTTCCGTTTCCCACGTTAATCTGATTCCACTCATCAAAAACACTCTTCTTCTTCTCACC CCCCACGCACAATAGCAAGCAACTTACGATTCATGTCATTCCAATGTGTTTTCCCATACCTAGGGTTTATCTCTCCCTCT CTCTCTTACAGGCCCACCCACTCTTACACCTAAAACCATCCTTCGTTTCTAAACCCTACCGTTCCCGAATCTCCGTTCAA CCGTCGCGATTCTCTGTCACCTCCGTCGCGGTAAGTGGTGCGCACTTCGAATCTCCGTTCACCCGTTGCCGGAAAATTAA ACTTAAACAACATGTATCGGTTTATGAAATCTGCTTCGATTCATTTGATTTGGTATTGTTTGTTTCTTTTATTAAATAAT CATCACATGTTCGCTATTTTTCACAGTTCTCTTCCGTTTAAATTGTTCTGCTGCATGTATGTTGTTGTTTTGATTAGAAT TTTTTGTGCTTTTGTACAGGGGAAACGGTGAAGATTGATTGGGCTTTTGGTGTTTGCTTGACTTGTAGTGTTAGTTGAAT GTCTGGTTTGCAATAAAAGAGATGTATAATCAGGCGAATCGCGGTTCTCATCCATTGCCGCCACCACCACCACAGCCACC GGCTTATCAACAGGCTCCGCCGCCTCCTCCACCTCCGTCGCATTTTCAGCATTTTGCCCCACCACCTCCACCTCCACCGC CTCATGTGTATTTACATGGACCTCCAAGCACATCCACATTTATGCCAAATGTAGGACAGTCATATGCAACCCCTTCTCAA ATGCACCATGGAAACGGCATGGCGCCACCGCATAGTTACTCTACCCTTGGTCAGAATAGTTACTCTACCCTTGGTCAGAA TTCACAGCATTCTTTGAATATAGGGGTCCATAGTCATCCAATGCCGCCCCCGGTTCATCCTCCCCATGCGGCCCACACTC ACCAGGAACCATCTTGGGCTCCAGGGCCGCCAGCTAGAGTATTGCCACCTCCCCCACCCCCTCCTCCCTCTTCTTCCCAA GGACAAATTTTGTATAATTCTCCTTTCCATCAACCGCCTTCGCAGCCTGGTGACATTCAGAATCTTCAGCGTAGCCATAA TACTTTTCCTCCTCCTCCTCCCCCTCCCACTTGTGGGCCGGGTGGAGTGAATGCTCATTCAACTGTTGGGAATTACCAAA TGCCTTCCATTAGTGCCCCACCACCACCGCTACCGTCCTGTCCACCACCAGTTGCACCATCTCCACCGCCTATTTCCCCT TCTGTGACTTCTGCATCCTCCCAGGCTGCACGGACTGATGACCTGAACTGCTTGAAGGTTTCTGGCTCTGAATCAAAGGA TATGGATTCAGTTGACAGAGTTGTAGCCCCCTGTCCTTCTGGCACTGTGCCTTTGTGCAATTCTGATGCCAATCAGGGCG GTGGAAGTTGTAGAGAGGTTGCTGTTGCCGGGAGAGATGAGCTGTTGTCAACTAGAAGTGTAATTTTGAATCTTCCCCCA GCTCCAACCAAGCCAACAGATGAAAAAACTGTGCAGAAGATTGAAGGTTTTTGTCAGCTTATTGCTGAGAATGGTGCTGA TATTGAAGACAAGATTCGTCAAGATGAATTTCAGAATCCTGAATATGCATTTTTGTTTGGTGGGGACCCCGGAACTGAAG CTGCAATTTCTCACTCATATTTCCTATGGGTGAAGAAAAAATATAAATTGGAACTTAGGGGGCATGAAGAGAATAATGAA TCACAGTTAAGGCCTCTAGCAGTAAGCTCTTTTCAGGAACAGCATCATCTGCATGCTGCAACCGTAAATGCAGATTCTGA CATGGAAATGGAAGGTTAGTTTGCGTTCTTATAGCCCTGACATAGAAATATGTTAAGATGCTATCTCTGTTATATTAATG CTCTCATGATAACTGATAATAATATATTAACATTTTTTTTCTGTTTTTGAATTATGATAACTGTTGTTTCGGCCCATCAT ATTGGTTCGAGTCCTGAATAAGTGAATAAATAAGCAATTGAGTCTGCTGTTTGTATTCCTATTATGACTATTTTTATATT AGATTTGGATGCTTGTACAAGCTGCATTTGAGAAAGTAAAGTATGGAGCTCATAATCATAACCATTGATGGAAAAGCCAA CAGTTTAGAATTTTGTAAAATACAAGCGCATGGATAACATATCATAGATATGTGAGATTCAGCTTTATTTTCCATCAAAG GTTACTATTTGTACTTTACTTTGAAGAGTAAAGACAGACTGTTAATTTGATATAATATGAGTTCCAATGTCCTTGAGGGT GAATGTCTCAGCTATTTTATTCTGATATCATGTTCTCTGCTTGGTTTATGTAACTGAATGGGTAAGAAAAGTGTGCATTT TGGGGGTGAGGGTAGTTGGTTATTACATTTGTTGTTTGTGATGTAATTTTTGGATGATAGCTCTGAAAATTGGCAAGGAA AAAACAGGAGTGGGCAAAACTAGACTGATTATGCTAATATGCTTATTATCGTTACATTGTATATTTTGTTTTGATAAATC CTTACTTTGAACAAGTATAAGTTTATTGTAAACTTTGAATCTGATCTGCTCTATGTCATTTCTCTGTGGATGCTTTAAGA TGATATCACGCTTTCTGACAAGGACCAGGGATCAAATTATGCAATTGAAGCCTTTACTAAGCCTCATGATCAGGTCAATA TTGTGTTTAGCATTGATAAGCAGCAGCAGCAGAATTCAACAGAAAATGATCCTACCAAGGACATCTTATCTGATGGTGCG TCATCATTATTATCTAAATGATATGCCCTCCTTTTTATCATAACAGTAGTGAAAGAATATTAGGAGCCTAATCTCTTATT TGGTGTCAAAAACATCCTAGAGTTAAGTCTGATTATTATTCCCTAAGAATGTTTTGTTTTGATGTTAACAATACTCTTTA AAAAAATACAGGATCAAGGCTTTTATCTGATGAGCATATGAAGCCTGCAAAGTCAGTTACTAAGGTTAGCAGTCTTGTGA ATGAGACAACTGAAGTGGTTGAGTGCCCCCTGGGTAGTGTTTTGGAGAGATCTTCAACTCCTGTAAGTATTGATTTCATA CAAAATGGTACTTCGGATCACGATGAAGCTACTAATCCTGTTAGAGATTCTGGGAAACTTATAAGAAGTGGAAGCCCGAT AAGACTTCTTCAAGATTATGCTTCTGATGGCACTTCAGATAATGAAGATGAAGTCTGTGCTGCAGATGCTAATGTATTTA CTGTCTCATCCGGAGCTGACACTGGTGTTTCAGCTGCTCATAAAGATTCAAATAGCTATTTGGAGACTGATATTGGATCT AAGAGTCCCTCTAATACTCAAACAGAGCTTGAGATGCTCTCCAAAACCACACAGAATGATTCAGAAATATCTCCACATTT AGTTCAAGAATCTAAGGGAACCTGTAAAGGATCTGTCTCAAGTTCTAATCATGGATGTATTGAGCATAATCTTGAAAATC AGGTGTCTGCTCATTTTACTCGTTCAACGGAAGCTTTCCAGGTTAAAGATGGGTTAAGTGGTACTGGCATTGACAGTGAT CATAAGGGTGGTTATGCTGAACAGGAAAATGAGAGGAAAAACCCAAAGATTAAACCAACTGTTATGAAAGTAGATAAATT TGGAAGGCATCTCAAAGAAGGTGCTACAGATAGCGACTCTGATGATTCTTACAATCATCAGACTAGGAGGCTGAAGAAAA GAGATAGAAGCCGTAGTCGCAGCACATCTCCTATAGACAGGAGGAGTAGGAGGAGGAGGAGGAGTCCTCGGAGGCGAAAC GATAAAAGAAGCCGAAGCCGGTCTCGCAGGTATGTATTGCTGTTACTCTCTGTAGGATGCCCTGATTACCTGCTATTAAC TTTAATTTGAACCTCCCTATGTTGGTGAGGATCAATTGTCTTTCTTTACATTTCTCGACTTGTATTTTGATCACTTCAAT TATCTCTCTGAAGAATATTATATTTAGAATTTTTGTTGGTTTCAGCCGGTCTCCTCGGCGCCGTGGAAGCAGGAGTAGGT CCCCGATCTTAAGACGTTCAGGTGACTTTCATGGTGAGAATGTGAGAAGGGAAAAGGGCCAGTGCTTTAATTTCCTTCGT GGAAAGTGCTATCGAGGAGCATCTTGTAGGTACAGTCATCATGAACCTGAGAAGAATGCAACTTCTAGGCGTAATAGAAA TAAACATGATCTCGAAGTTTATTCTCATGAAAAAGTTTCTAGGAAGAATGAAGGCATGAAGGATATTTCTTCTAAAATGT CAGATTATGAGCATGATGAAGTCAGAAGTCAGGGTGTAGATCTTTGCCAGAATGTAAATGGCCAAGAAGCAGTGCAGAGA AAAGAAGATTCTGGGATGCATACTGTTGTGTCTACTAACTTTGGTCTTGATGGTCAATCTGTTGATAGCAATCCAAATAA ATCTGAAGGTCTCAGAGAAGTTGCTCCAGAAGTGCAGGAAACTTTAGTAGTCAGAGAGGTGCCTAAAACTTTAATCCATG AAAATGATGGTTTTCAGAAAGAAGTGAGTCCTCATCAGCAACACTTGGTTGATGGCTTCCGTGCTGATGCTTTTATACCA TCTGGTGATACACCTGCGAATGTCATTGCCTCAGAAGATGGTTCATTTGTTCAGCAAGTACAGTCCAATGCTTCTGGTGG AGTTCCAGAACAATCAGCAGACCCATCTCAAGTTTTAAATGTGTCATTAAGGACTGATTCATCATCTGATAAAGGATCAA TAATTTCTGCTAGTGCTGATAAGATTTCTGGTAGTGAACCTTTGCCATATATGTTACCATCAACTCAGATACAGTTAGCT ACTAGTTCTGTTGATCCATGTGTCACATCTGAGCAGCCTTCAGTGCATGCTCAGGTTTCTAAAGAGTTACCCCCACATAG TGGTTCCTCAGTGGAATTTCCACTTCCTACCTACCAGTTGCCTGCCTCTGCCGTTTCCCATTCTCAGAGTGAAAATGCTG TGCATATGCCACAAAATTCAAGGCAACATGGTGCGGTGCAACAAAATTCATTCTTTCCTTTCCAATCCACAATTAGAGGA AAGTTTGAACCTTACCCAGCTCCGTTCCACACACCAAACTCTCACTTCAGTGTACCGCCAAATAGCTGTTGGACATCCTT GCCGCTGCCGCCACCACCACCACCACCATCATCAGTGTATAATTCCAGTTTAAACTCGGAAGTTGCTAAACCATTTGTTT CTTCAGAATTTAATCAGAGTCAATTGCATTTGAGAACAGACTTTGTTTCTCAGACTTTCATGAATCCTGGATTGCCAACG CATTCTCAGAGTTCTAAGTTTCAAGAGCAAGCATACCCTTCAATGCAGGATCATTCACAAAAGTTCATGCATACAGAACC TTTCTCTCCAAACCATCTCCCTCAGGGGAACCCAGCAAGTCAGTTGCTTTCAGGCCCTAGTCTCGGAAGAGAAAGCCATC ATAATCTCTCAATGCAGGACACACATTTTTCAAGCTCCTTACCTTTTGGTGGTCTGGATCCTCAACCAAAGCAATTTTCC TGGGAGTCAGATGTGAACAGACTCAGACCTTGTTTGGATGGAAGGTTACCTCCTGAAGGACATTTCAATACATCTTCCCA CATTCATCCATTACCACAGAAGCCACAATCAGTTTATAATTTTCAGTATCCTGCATCTAATGTTAATTTGGGTGTGTCCA GAGAGACTGTTAATGCATCCAGATATCCACAAGATGTTCTTGATAGTAATCATTCAACATCTTTTCCTGATTTTGGAGGA TCAAGAATTACTGCTCACTATAATCCTTACGCGTCAACCTTTGACCAGTCTCTTAGTTCTAAATTCAGTTCAAGTATTTT AAGGCAAGAAAATGACATAATCAATGGTAACACTTGTGGTTCTTCTAGATCGAACCATACTCCTATTTATGGGGAAGGAG ATGGTGTTGGACCAAAATCTGCATCCTCACCAAAATCAGCTAGAGCTGTTGGTCAACCTTTACCCAGGTCTGGTGGTGAA CAATATGATCCACTTTTTGACAGCATTGAGCCATCATCCTCTTTGAAGAAATTAGATTTCGATCACAAGCGGGACACTAC GGGTGAATCCAATATAAGGCTTAGATCCAAAAGTTCTCATGTGTCCTCGGACATGGAAGAGAAGAAGCATCAGGAGGTTG GGGCTGTTGCATCTACCAGCTCTCAAAATAATGATGAATATGGTGAGACAGCAGATGCTGAAGTGGGTGCTGTTGAAAAT GACAGCCTAAGTAATCATACAGATGTTGAAAATTCAGGGGATGATGAGATTAATCAGATCAAGTCTCCTGGGAAAAAGAA GAAGAGCAAGGATTCGCGGTCTATGAAATTGTTCAAAGTTTCCATTGCAAACTTTGTGAAAGAGGTTTTGAAACCATCAT GGCGACAGGGTAATATGAGTAAGGTGGCTTTCAAGACCATTGTGAAAAAGACTGTTGATAAGGTGTCAGGAGCCATGAAA GGCCACCGTGTACCCAAGTCTCAAGCGAAGATAAGTCAGTACATTGACTCGTCACAACGAAAGTTGACTAAACTTGTGAT GGTAATTGATTTTCTCCTCATTTATCGTTTGTTTTTCCCTTCATCAGAATAAGTAGGTAATTGTTACATGTTTGGCTTTT ATATGGATGCATCCATATCTGAAGTTGTGCATAAGCTCTGCATTTTATAAACAAATCTGCATGCTGAGAAATGACAGAGA CTTCCCTCTTTCTGTATTGGTATATGACTGCATTTTAAGTATTTCCTTCAGTGATTTTAACTGAAAATTTGCCTCCGTGT TGAACTGCTAGTTAAGAGTTACTATTCCTCGACTGTTAGACAAATCTTGAGTTCTATTGAACTTAATCTGTGGGCTGTCT TCTGATGATTGCTTTAGTATTAATACGCAAATTACATTTAATGACGTTTCATGCCCTACATTTTCTGCAGGGTTATGTTG ACAAGTATGTCAAGGTGTGAGGGTTGGAAGTGAGCTATGCCAATGTTTCTTCAAAATTAGATGTGGGCATTTTAGCAAGA AATGTCAATTCTTACCGAGAGATGTCCCTTTTCAGTTAAAGGGGGTACTAGATGATGATATGTGTGACAGTGGTTGTTCA GCATTCCAATTCCTGGAGATTTCTTGGTCAACCACAAATATGTATGTATTGTATTTTCATTTTGTGATTCTTGTAATTTG CTTTTATTTTTAGTTTTCATTCCATGTTATATAGTATTTTGAATACAAGAGGAAATGAGTCAAAAATGGGATTTTTTGAG AATGTTTAGTTTAGTTGGTCAAAATATGGAAAGAAAGGTAAATCTGAGTTTAATTTTGATAATTCAATTGCTTCATGTCA CATTAGCTTAACTGCTTAAAAACGGTTACACAATTTTATATTTTGATTAAATTTAAAATTTATTTTATGATGTGGCCAAC AACTATTAGTTTTTAATGTAAAGAAGTTTTACTCTAACGGTTGATATACATACATTAAATACAATTTTAACTTGCTTGGA TAGAGAGTTAAAGGAGAATAAATGGTGCTGTGAGTAGAGACTTATG
CDS sequence (LotjaGi1g1v0212200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTATAATCAGGCGAATCGCGGTTCTCATCCATTGCCGCCACCACCACCACAGCCACCGGCTTATCAACAGGCTCCGCC GCCTCCTCCACCTCCGTCGCATTTTCAGCATTTTGCCCCACCACCTCCACCTCCACCGCCTCATGTGTATTTACATGGAC CTCCAAGCACATCCACATTTATGCCAAATGTAGGACAGTCATATGCAACCCCTTCTCAAATGCACCATGGAAACGGCATG GCGCCACCGCATAGTTACTCTACCCTTGGTCAGAATAGTTACTCTACCCTTGGTCAGAATTCACAGCATTCTTTGAATAT AGGGGTCCATAGTCATCCAATGCCGCCCCCGGTTCATCCTCCCCATGCGGCCCACACTCACCAGGAACCATCTTGGGCTC CAGGGCCGCCAGCTAGAGTATTGCCACCTCCCCCACCCCCTCCTCCCTCTTCTTCCCAAGGACAAATTTTGTATAATTCT CCTTTCCATCAACCGCCTTCGCAGCCTGGTGACATTCAGAATCTTCAGCGTAGCCATAATACTTTTCCTCCTCCTCCTCC CCCTCCCACTTGTGGGCCGGGTGGAGTGAATGCTCATTCAACTGTTGGGAATTACCAAATGCCTTCCATTAGTGCCCCAC CACCACCGCTACCGTCCTGTCCACCACCAGTTGCACCATCTCCACCGCCTATTTCCCCTTCTGTGACTTCTGCATCCTCC CAGGCTGCACGGACTGATGACCTGAACTGCTTGAAGGTTTCTGGCTCTGAATCAAAGGATATGGATTCAGTTGACAGAGT TGTAGCCCCCTGTCCTTCTGGCACTGTGCCTTTGTGCAATTCTGATGCCAATCAGGGCGGTGGAAGTTGTAGAGAGGTTG CTGTTGCCGGGAGAGATGAGCTGTTGTCAACTAGAAGTGTAATTTTGAATCTTCCCCCAGCTCCAACCAAGCCAACAGAT GAAAAAACTGTGCAGAAGATTGAAGGTTTTTGTCAGCTTATTGCTGAGAATGGTGCTGATATTGAAGACAAGATTCGTCA AGATGAATTTCAGAATCCTGAATATGCATTTTTGTTTGGTGGGGACCCCGGAACTGAAGCTGCAATTTCTCACTCATATT TCCTATGGGTGAAGAAAAAATATAAATTGGAACTTAGGGGGCATGAAGAGAATAATGAATCACAGTTAAGGCCTCTAGCA GTAAGCTCTTTTCAGGAACAGCATCATCTGCATGCTGCAACCGTAAATGCAGATTCTGACATGGAAATGGAAGATGATAT CACGCTTTCTGACAAGGACCAGGGATCAAATTATGCAATTGAAGCCTTTACTAAGCCTCATGATCAGGTCAATATTGTGT TTAGCATTGATAAGCAGCAGCAGCAGAATTCAACAGAAAATGATCCTACCAAGGACATCTTATCTGATGGATCAAGGCTT TTATCTGATGAGCATATGAAGCCTGCAAAGTCAGTTACTAAGGTTAGCAGTCTTGTGAATGAGACAACTGAAGTGGTTGA GTGCCCCCTGGGTAGTGTTTTGGAGAGATCTTCAACTCCTGTAAGTATTGATTTCATACAAAATGGTACTTCGGATCACG ATGAAGCTACTAATCCTGTTAGAGATTCTGGGAAACTTATAAGAAGTGGAAGCCCGATAAGACTTCTTCAAGATTATGCT TCTGATGGCACTTCAGATAATGAAGATGAAGTCTGTGCTGCAGATGCTAATGTATTTACTGTCTCATCCGGAGCTGACAC TGGTGTTTCAGCTGCTCATAAAGATTCAAATAGCTATTTGGAGACTGATATTGGATCTAAGAGTCCCTCTAATACTCAAA CAGAGCTTGAGATGCTCTCCAAAACCACACAGAATGATTCAGAAATATCTCCACATTTAGTTCAAGAATCTAAGGGAACC TGTAAAGGATCTGTCTCAAGTTCTAATCATGGATGTATTGAGCATAATCTTGAAAATCAGGTGTCTGCTCATTTTACTCG TTCAACGGAAGCTTTCCAGGTTAAAGATGGGTTAAGTGGTACTGGCATTGACAGTGATCATAAGGGTGGTTATGCTGAAC AGGAAAATGAGAGGAAAAACCCAAAGATTAAACCAACTGTTATGAAAGTAGATAAATTTGGAAGGCATCTCAAAGAAGGT GCTACAGATAGCGACTCTGATGATTCTTACAATCATCAGACTAGGAGGCTGAAGAAAAGAGATAGAAGCCGTAGTCGCAG CACATCTCCTATAGACAGGAGGAGTAGGAGGAGGAGGAGGAGTCCTCGGAGGCGAAACGATAAAAGAAGCCGAAGCCGGT CTCGCAGCCGGTCTCCTCGGCGCCGTGGAAGCAGGAGTAGGTCCCCGATCTTAAGACGTTCAGGTGACTTTCATGGTGAG AATGTGAGAAGGGAAAAGGGCCAGTGCTTTAATTTCCTTCGTGGAAAGTGCTATCGAGGAGCATCTTGTAGGTACAGTCA TCATGAACCTGAGAAGAATGCAACTTCTAGGCGTAATAGAAATAAACATGATCTCGAAGTTTATTCTCATGAAAAAGTTT CTAGGAAGAATGAAGGCATGAAGGATATTTCTTCTAAAATGTCAGATTATGAGCATGATGAAGTCAGAAGTCAGGGTGTA GATCTTTGCCAGAATGTAAATGGCCAAGAAGCAGTGCAGAGAAAAGAAGATTCTGGGATGCATACTGTTGTGTCTACTAA CTTTGGTCTTGATGGTCAATCTGTTGATAGCAATCCAAATAAATCTGAAGGTCTCAGAGAAGTTGCTCCAGAAGTGCAGG AAACTTTAGTAGTCAGAGAGGTGCCTAAAACTTTAATCCATGAAAATGATGGTTTTCAGAAAGAAGTGAGTCCTCATCAG CAACACTTGGTTGATGGCTTCCGTGCTGATGCTTTTATACCATCTGGTGATACACCTGCGAATGTCATTGCCTCAGAAGA TGGTTCATTTGTTCAGCAAGTACAGTCCAATGCTTCTGGTGGAGTTCCAGAACAATCAGCAGACCCATCTCAAGTTTTAA ATGTGTCATTAAGGACTGATTCATCATCTGATAAAGGATCAATAATTTCTGCTAGTGCTGATAAGATTTCTGGTAGTGAA CCTTTGCCATATATGTTACCATCAACTCAGATACAGTTAGCTACTAGTTCTGTTGATCCATGTGTCACATCTGAGCAGCC TTCAGTGCATGCTCAGGTTTCTAAAGAGTTACCCCCACATAGTGGTTCCTCAGTGGAATTTCCACTTCCTACCTACCAGT TGCCTGCCTCTGCCGTTTCCCATTCTCAGAGTGAAAATGCTGTGCATATGCCACAAAATTCAAGGCAACATGGTGCGGTG CAACAAAATTCATTCTTTCCTTTCCAATCCACAATTAGAGGAAAGTTTGAACCTTACCCAGCTCCGTTCCACACACCAAA CTCTCACTTCAGTGTACCGCCAAATAGCTGTTGGACATCCTTGCCGCTGCCGCCACCACCACCACCACCATCATCAGTGT ATAATTCCAGTTTAAACTCGGAAGTTGCTAAACCATTTGTTTCTTCAGAATTTAATCAGAGTCAATTGCATTTGAGAACA GACTTTGTTTCTCAGACTTTCATGAATCCTGGATTGCCAACGCATTCTCAGAGTTCTAAGTTTCAAGAGCAAGCATACCC TTCAATGCAGGATCATTCACAAAAGTTCATGCATACAGAACCTTTCTCTCCAAACCATCTCCCTCAGGGGAACCCAGCAA GTCAGTTGCTTTCAGGCCCTAGTCTCGGAAGAGAAAGCCATCATAATCTCTCAATGCAGGACACACATTTTTCAAGCTCC TTACCTTTTGGTGGTCTGGATCCTCAACCAAAGCAATTTTCCTGGGAGTCAGATGTGAACAGACTCAGACCTTGTTTGGA TGGAAGGTTACCTCCTGAAGGACATTTCAATACATCTTCCCACATTCATCCATTACCACAGAAGCCACAATCAGTTTATA ATTTTCAGTATCCTGCATCTAATGTTAATTTGGGTGTGTCCAGAGAGACTGTTAATGCATCCAGATATCCACAAGATGTT CTTGATAGTAATCATTCAACATCTTTTCCTGATTTTGGAGGATCAAGAATTACTGCTCACTATAATCCTTACGCGTCAAC CTTTGACCAGTCTCTTAGTTCTAAATTCAGTTCAAGTATTTTAAGGCAAGAAAATGACATAATCAATGGTAACACTTGTG GTTCTTCTAGATCGAACCATACTCCTATTTATGGGGAAGGAGATGGTGTTGGACCAAAATCTGCATCCTCACCAAAATCA GCTAGAGCTGTTGGTCAACCTTTACCCAGGTCTGGTGGTGAACAATATGATCCACTTTTTGACAGCATTGAGCCATCATC CTCTTTGAAGAAATTAGATTTCGATCACAAGCGGGACACTACGGGTGAATCCAATATAAGGCTTAGATCCAAAAGTTCTC ATGTGTCCTCGGACATGGAAGAGAAGAAGCATCAGGAGGTTGGGGCTGTTGCATCTACCAGCTCTCAAAATAATGATGAA TATGGTGAGACAGCAGATGCTGAAGTGGGTGCTGTTGAAAATGACAGCCTAAGTAATCATACAGATGTTGAAAATTCAGG GGATGATGAGATTAATCAGATCAAGTCTCCTGGGAAAAAGAAGAAGAGCAAGGATTCGCGGTCTATGAAATTGTTCAAAG TTTCCATTGCAAACTTTGTGAAAGAGGTTTTGAAACCATCATGGCGACAGGGTAATATGAGTAAGGTGGCTTTCAAGACC ATTGTGAAAAAGACTGTTGATAAGGTGTCAGGAGCCATGAAAGGCCACCGTGTACCCAAGTCTCAAGCGAAGATAAGTCA GTACATTGACTCGTCACAACGAAAGTTGACTAAACTTGTGATGGGTTATGTTGACAAGTATGTCAAGGTGTGA
Protein sequence (LotjaGi1g1v0212200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYNQANRGSHPLPPPPPQPPAYQQAPPPPPPPSHFQHFAPPPPPPPPHVYLHGPPSTSTFMPNVGQSYATPSQMHHGNGM APPHSYSTLGQNSYSTLGQNSQHSLNIGVHSHPMPPPVHPPHAAHTHQEPSWAPGPPARVLPPPPPPPPSSSQGQILYNS PFHQPPSQPGDIQNLQRSHNTFPPPPPPPTCGPGGVNAHSTVGNYQMPSISAPPPPLPSCPPPVAPSPPPISPSVTSASS QAARTDDLNCLKVSGSESKDMDSVDRVVAPCPSGTVPLCNSDANQGGGSCREVAVAGRDELLSTRSVILNLPPAPTKPTD EKTVQKIEGFCQLIAENGADIEDKIRQDEFQNPEYAFLFGGDPGTEAAISHSYFLWVKKKYKLELRGHEENNESQLRPLA VSSFQEQHHLHAATVNADSDMEMEDDITLSDKDQGSNYAIEAFTKPHDQVNIVFSIDKQQQQNSTENDPTKDILSDGSRL LSDEHMKPAKSVTKVSSLVNETTEVVECPLGSVLERSSTPVSIDFIQNGTSDHDEATNPVRDSGKLIRSGSPIRLLQDYA SDGTSDNEDEVCAADANVFTVSSGADTGVSAAHKDSNSYLETDIGSKSPSNTQTELEMLSKTTQNDSEISPHLVQESKGT CKGSVSSSNHGCIEHNLENQVSAHFTRSTEAFQVKDGLSGTGIDSDHKGGYAEQENERKNPKIKPTVMKVDKFGRHLKEG ATDSDSDDSYNHQTRRLKKRDRSRSRSTSPIDRRSRRRRRSPRRRNDKRSRSRSRSRSPRRRGSRSRSPILRRSGDFHGE NVRREKGQCFNFLRGKCYRGASCRYSHHEPEKNATSRRNRNKHDLEVYSHEKVSRKNEGMKDISSKMSDYEHDEVRSQGV DLCQNVNGQEAVQRKEDSGMHTVVSTNFGLDGQSVDSNPNKSEGLREVAPEVQETLVVREVPKTLIHENDGFQKEVSPHQ QHLVDGFRADAFIPSGDTPANVIASEDGSFVQQVQSNASGGVPEQSADPSQVLNVSLRTDSSSDKGSIISASADKISGSE PLPYMLPSTQIQLATSSVDPCVTSEQPSVHAQVSKELPPHSGSSVEFPLPTYQLPASAVSHSQSENAVHMPQNSRQHGAV QQNSFFPFQSTIRGKFEPYPAPFHTPNSHFSVPPNSCWTSLPLPPPPPPPSSVYNSSLNSEVAKPFVSSEFNQSQLHLRT DFVSQTFMNPGLPTHSQSSKFQEQAYPSMQDHSQKFMHTEPFSPNHLPQGNPASQLLSGPSLGRESHHNLSMQDTHFSSS LPFGGLDPQPKQFSWESDVNRLRPCLDGRLPPEGHFNTSSHIHPLPQKPQSVYNFQYPASNVNLGVSRETVNASRYPQDV LDSNHSTSFPDFGGSRITAHYNPYASTFDQSLSSKFSSSILRQENDIINGNTCGSSRSNHTPIYGEGDGVGPKSASSPKS ARAVGQPLPRSGGEQYDPLFDSIEPSSSLKKLDFDHKRDTTGESNIRLRSKSSHVSSDMEEKKHQEVGAVASTSSQNNDE YGETADAEVGAVENDSLSNHTDVENSGDDEINQIKSPGKKKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKT IVKKTVDKVSGAMKGHRVPKSQAKISQYIDSSQRKLTKLVMGYVDKYVKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 243 | 243 | - | – | |
| MobiDBLite | 9 | 52 | 44 | - | – | |
| MobiDBLite | 56 | 74 | 19 | - | – | |
| MobiDBLite | 84 | 108 | 25 | - | – | |
| MobiDBLite | 135 | 152 | 18 | - | – | |
| MobiDBLite | 153 | 179 | 27 | - | – | |
| PANTHER | 166 | 1650 | 1485 | 0.0 | – | |
| PANTHER | 166 | 1650 | 1485 | 0.0 | – | |
| MobiDBLite | 209 | 233 | 25 | - | – | |
| Gene3D | 306 | 381 | 76 | 1.5E-6 | ||
| SUPERFAMILY | 309 | 381 | 73 | 9.94E-10 | ||
| ProSiteProfiles | 326 | 374 | 49 | 8.643 | ||
| MobiDBLite | 457 | 476 | 20 | - | – | |
| MobiDBLite | 457 | 471 | 15 | - | – | |
| MobiDBLite | 527 | 549 | 23 | - | – | |
| MobiDBLite | 599 | 632 | 34 | - | – | |
| MobiDBLite | 676 | 799 | 124 | - | – | |
| MobiDBLite | 688 | 735 | 48 | - | – | |
| MobiDBLite | 751 | 788 | 38 | - | – | |
| ProSiteProfiles | 803 | 830 | 28 | 13.779 | ||
| MobiDBLite | 1209 | 1268 | 60 | - | – | |
| MobiDBLite | 1409 | 1523 | 115 | - | – | |
| MobiDBLite | 1468 | 1485 | 18 | - | – | |
| MobiDBLite | 1493 | 1507 | 15 | - | – | |
| MobiDBLite | 1508 | 1522 | 15 | - | – | |
| MobiDBLite | 1537 | 1567 | 31 | - | – | |
| MobiDBLite | 1542 | 1559 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Biological process | RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi1g1v0212200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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