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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0213300 |
| Transcript ID | LotjaGi1g1v0213300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Non-structural glycoprotein 4; TAIR: AT5G61040.1 hypothetical protein; Swiss-Prot: sp|Q6NQ99|POLAR_ARATH Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION; TrEMBL-Plants: tr|A0A0B2Q9A9|A0A0B2Q9A9_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0213300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:47049224..47056276) extracted from Lotus japonicus Gifu genome v1.2.
TTACGACACAAGAAAATGTCAATGTGGATGAGACCCTAGTGAACCCTACAAAATTGAAAAATTCATTTTCTTTGCTGGAA AATAATAATATATTATTCGTGTGATATTTTCCAAGCGACCAGTGTTTTTCTCATCCGTGAATGTAGATGTTGTGTGGAGA TAACGCTGTACCGGGTCTCATTCCCTTTTCCAACCAACCTGCGACGACAAATTCGGCGTCCTAGATTTCGTTTCACAACA CTGAGGAATTTTCGAATGTATGTTTTCTTTCAATTTTCTCTCTCTTTTTCTCCAATGCCAGAAAATTACAAGCAATAGAG TCCGTGTTCATTGGTTATTGTATTGATAAAGTGAGGGGTTTTGGCTTTGATTGTTTTGGTCAAATGGGTTTTTTTTCTCA TGCACAGGTTTTGCAGTGAAGTTGCTGCTACTTGTAGTTTCTGTTTCTTGTAATCAAATTTGGTTCTTCTTCAAGTTTGT GTGGTTTTTTTGTTTTTGTTTTTTGATTCATTGAGTGGGTTACTTGTTTCTCTCAGAAATGTTTCATTTAGGGGATGGTT GTCTCTGGCATTGGTTTATTTCTGCTTTTGAAGTTTTCTGAAATTTATGTTTCTTATTTCTTCTTGTTCCTTTTCTCTGG TTAAGCTCAGGTGTTTATCTGATTTGAAGTATTGTTGGTTCTCCTTGCTTGCACTTGGGGAGTAGTTTCTTGTGGTTGAA GTGGTGCATGGTAGGTGTTTGATTTAATGCACAATATAGTAAGAGTGGGGAGGAGGAGTAGATGTTTGGTGAGTCAAGGA TTGTGGTTTTGGTTTCCTTGAAGGGGTTTTCAGGTCTTCATTCTTTAGTTTGTTACTGCCAGAACACCTGAAGGGTATTT CACTAATTCATGGAAAGTTCTTCCCTTGACTGTTTGGTGCTAATAATTGAAAGAAAGAGTGTTGGCTCTGTTGTGGAGTT TGGTTAGTGGTTGTGGGAGGAAGTCAGGGAGGGGAGAATGGATTTGTGGGTTGTTGCAGCTGCTGCTGGAGCTGGGTATT TGGCTAAATATTGGAACAAGATTTCAAAAGATGGTGATAGCTCTTATCGTTTGTCTTCGGAGGATTCAAATTTTGAGAAT CCTGAGTCCTCGAGCTGCCCCTTCTCCTTACTTAAACAAGCGCGGAAGGGTGAATTGGGTAAAGATGTTTCTTTAGATAG AAGGGCTTCAAAGGGGAAGTCTTCAGATGTGGACTTGCCGGATGATCTTGTGACAGGAGAAGTGGCTTCTAACATTAGGC ACTTCCAGAATTACAGCAACAGTGATGTCCTATCGATATCGAACTTAGTAGTACCGTTATCACAAAGTGACGGTAACTTC AAGAATTTTGAAGACGGAATTGAACAAAGCTCCAATATTGGTGGCAATCATGGTTTCTTTGTTCCTGATTCTTCTGCCAA AGTGGTTCCTGTTCATAACTCTTCTGGACATAAAACCTTTCTCAGGACTAGAAATTTGTCTGGGCACATTAGTAAACCTT TAAATTCCTTAGAAAGTTGTTTTATGGCTCAGCTATACAAAGAGCATGCCAAAATAGAAGAATACGTCTTTAGTCCTCTT TCATCGTCATCCACGACAACGAGGTCACTTCTTGTAAGCAATGGAAGCCAAATAATCAACCATGCAAATGATATTTCGTT AAGTGCATCATTTGGGATCAAGGAATATAAGTTGCATAAAGACGCCAGTCAAGTAAGAGATGAAAATGTATTTGGGATTC CTTCCTTACCCAAACTCAGGACTTCAAATGAAGCGAAGAAGATGAAATTAAATGCATTCACTGGGCGAAGCAGAAGATTG AGCTCTTCCGGAGATTTGTTTAGCGGAAAACTCATCCATACTCATTGTGGTATATTTCTTGATTTAAACTATACCACTTA GTCAATGCTGCCTTTTTGAAAATGATTGTTTTGTTATATTTATTGTTCATGCCTGTGTTTAGACCCCTTTATTTTGTGGT ATGAATAACACCACCGTTATTCTTGAAGTGCCTATCAGTTTTCCAATGCTGTATTATAATCTTTCAAGATCTCTCTGCAT TCTATGTTTACTCTCTTCCTGCAGTGAGAAGAAAAACTATAAAGGAATCTTGGTTTCTTTTTGCTTACACGTATATGTTA TAATATAGGGATTTGATTTTTCTGTACAATTCACTAGTCTCAGAGAATGATACTTGTATTATTTGAAACAGCAATGCTAT TTAGTACGAGTCAATCTCTCCACGAATTGCAAGAATGGTATTTTCAACCAATCAGAGGTCTTTTTGTCGGAAATCATGGG TGTGGTTGGTGAATAAGAAAGTTTAAATACACACCAATCAAGTTTCATTCTTGAGTTTCGTTAACTCAATTTTCGTACTA AAGAGCATTGTTGTAGTTGAAAATCAATTTGTTTTCGAAGTTCAATCTGGTTTATGTCCTTATGCATGGGAAGGATATTG TAGCTCTTAGTTTCTCTATTCACGATAAATGATGTTGAAAAAGCACAGTAGAGAAATCGCATTTTTCTTTTAAAATGGAG TTTTTGCTGCTGGAGGTGGGAAGAAATTGCTTCAGGTCCTAAAATAGCATTCCCAACGTTAATTAGTAAAGGGTATCTGT TCTTTAACGTGCTGGCCAAGGCTAACTTAATAACCCAAACATATCATATGCATTAGAGGCTTCAACATTTATTTTATTAT ACAAATTAAGTTGCTATTTTTTATGGGTGGATATTATGTCTCTGATACATAATTTGTGTTATGTAATTATGTAATGAGTT TTACATTTGATAACTATATTTGTTAACACATCCATAATCATCAGATCCAACATTTCTCTTCAGTCTTGGGATTTCTTTCG GGATGATAGCTTCCATCGTGGAAAATAAAAAAGAAATGGATAGCCTAAGAGAACTGTTGAAGCAGACTGAAAACTTGGTT CAAGATCTACAAGAGGAACTAGAAATGAAAGATTCATTGACTGTGAAGGAGATAAATAATGAAAATTATGGTTCCCAGGA TACATGTGATCATTCCTCCTATGATAAGGAGCTAAATGAATTTTCCCCTGAAAAGCATATGGATAACTCTCCAAGAATTA ACTGCAAAGAATCATATGATAAGGCAGAACTAAGTTCAGAATCTATAAGCAAGATTGAAGCTGAGCTTGAAGCTGAACTT GAGAGACTGGGGTTGGACATGAATGCATCAAGCCTGGAAGGAAAATTATCTGAGCTTGTTGAGGTAAGCATGCACGTTTG TCTTCCATTTCCTCGTAACTACATGATATGTCTTTTTTTTATGTGTTTCATTATTTATTACTTTTTCCGTGTATGTACCA CCTCGTTGAACTGGTCTCATCCTTGACATTGGTGGAAATAACAAAGAATGGAATGGAAATTGTTGCTTCTGATTTATGTG CCTTAAAAGAGAGATCTTAATCTGAATTCCTTCCTGTTTTCACCCTTACAGAGAGTACAAAGTACAGTCTAGATCTGTTT AACATGAAAGACGAATGCCTGGAACTTCCATGCATTCTGGTTGATACTGCAGCATGGGTTTCTCATACATAAGATTAATT CTCTAGTTGAATTTGGAATTCTGTCAGTAACTGAATGTTGCTAGTGACCGACTTGCAGTGCTATAGATATTGTTTTGGCT CTTTTTGCCCTATTATATATGCCTTAATTCTCTTTGAAGTTCCAAAGCATATCTGTTTTTTCAAAGTCATACAAATTTTC TTTTTCCAATGAAAGCTTACATCCTATCCAATGCTTTGTTCCATTGCTTTTTTATTGAAGTTAACAGTTCCTAAATGGGT GTTAATGACTTAATGGTGCTCAAATTCTTGCAGCTTGAACCAGAGTTTGTGGCTGATTTTGCCAAGGGTGAGTTGCGAGT GGAGACTGTAGGTGGCAAAAACTTTGTACATCCAAAATCGAATGAGGTTGCCAACGACACCACACCTCTCCCTGGAAACT ATGCAGTTTTGCCTCATGAGCTGAGTTTGCGTTTGCATGAAGTTATACAATCTCAACTTGAGCAACGCGTGAAAGAGCTT GAGAGTGCCCTTGAAAACAGCCAGAGGAAAATACGGCTCATGGAATCAGAGCGTGAGGGTAATTCACAGAAGGGAGATTC CCTTACTAGTGGAAACCTGTTCACTTATGAAGACTGTGACACTATGTCACAGCCTTTAGTCCTCAATTTATCAGGTGAAG CTCTAGATGCATACAATGAGGCCTATGAAGAACTAATAAGGATAAATGACTCTGAAGAAAATTCACCATCAGGCACCCAT GATAGTGACCACAAAGAAGGTTTGCATTCACTTGATTGGAATGCTTTAGAGGTTCAGCATGATGGAGAAAATTGTTCCAC ACCTTACTCAACAATTAATGGAAGGAGACTCTCAGGGGAGCTCTCTTCTACCCAGGTGACAATGTTCGAAGGTCAAAGTT CTAGGATCTATGAGTTAAATGATATAGGAGATGAAAGTTGTGATGGTGATAATGAGGTGGAAAGGCAATTGATTAGGCAA ATTGTTGAAAGGTCTAAGAAAGGTTCTTCTGTTTTTCAAAATGCACAAAAGATGTTGTATTCTATGGATGATGATGAACA TTGATATCAATTTTGTAGGCATGTAGGAATATAAAAGAGTAGTATTTTCGTATTGACCTTATTTTTTCATAATTTGTTCT GTTATATCTGTAAAGCCTCTTTCCCTGCTGTGGAGTTCCTTGCCTTAAAATGCACAAGGTCTGCGTTGAGCCCTCCACTT GAGTTGTTTCTGCCGTCCTATATTTTTAGAGACCAGATTCAACTCATCCATATTTTAGAGAACTGGAAACATATTTAACC CATAAAAGAAATAGCAACCATAACCCTACAACTACAAGTGGCAGAAAGCCAGAAACAAAACGGTGAAATGCAGTTCACGA CTTGCCTGTACACCCCCATTTTTACCCCTACTTTGTTAGGATTATTTCCTAAATTTGTTACAAATCCTTTAATGATATTA TCCTAAAATTAATCTTGATGTAGCTTAGAAATTGTTTTGAGAATTTTTTTTTGTTACATTAGAAATATAAATTGCACCCT CCACCTTCAAGGATTGATTACTGGATCCCTGGACCTCCTACCTAACTCATATGTCCCATAGCTCCTATCACTTGAACTAT CATTCATTGAAAATATAAATTGTACCCTCTAGGGATTAATCTTTTCACATCTATAAATCAAATACTACCTCCCGTCCTAA TATTTAGTTATTTAAGATTATGCGCACTTTAATTGATAAATAACTTTAATAACATACCCTTATTAAAAAAGTGAGTTATA TCAAAGAGAATGAAGATAATTGTTGAGTAATTAGTGACATTGGTCATAGGTAAAAATAAGAGGTAATATGTAATATTTAT AGTAATTGGTTGGATAATTCTAAAATAATTGTTAAATGAGAGTATATATGAAAAAAAAGACAATTGATGGTGGATTCCTA ATGCAATAAAAGTTTCTGAATAAAAGAAAAAATCTAAAACAAAAGAATGCCCTATTTTACTGACTGAAACATGCTTTTAG AGGGGGTACAGGGAACACAGCATCAAATACCAAAGTTGCTTTGATTGCTATCCTGTTGGCCACTGCTGCTGCATCCCAAT TCCCAACTTTAAGCACATCCACCATCACCACCACCACCACCAGCACCACCACCAAAGTCACCACCAGTACCCATACCAAA GGTACCATACCCCATGGCACTTCCAGGGTATTCACTGCTGCTGCCACCACCAGCAACATTAAAATTATTACCACTGCTGC CAAATACAGCAGAATTGTCATAATTATAACGATTGCCAATTCCGGGCGCAGCAGTGCCGTAGTTACCATAACCACCACCA GGAGCACTACCATAGTTAACAGTATTACTCTCTCCAACACCCGCAGCAGCAGCATAATTTCCATTGTTGACACAGTAACC TCCACTAGTTCCATCATTGTAAGTGTTTCCACTAGGAAAGCTGCCATAACCATAACCACCACCAGAACTTCTGGTATTGT CATCAGTACCATAGTTATTGCCAGCACGGTTACCAGGATTGCTATCCGATTCATAGACATCTCCAGGATATCCAGTAGTA TTTAAAACTCCAGTCGCATTGCCACCGGCATTCCCATATGGAGAGTTACCGTAACTACCTGGATATGCACGGGGTCTTTC ATTAGCAAAATTTACCTTAACCTGACGACCATGTAGATCCTGAAAAATAAAATTACATTCAGAAAGAAGTAATAATAAGA AAGGTAACAGTAACATTGTCCATCATTATATTTGCAAAATAAAATTAACATGAAGTGACTCTATGAAGGATTGAAAAGTA TGAAACAGAAACTACCAAGATATTATGCGTTACAGGTGAAGTTATAAACTAGCTAATGCCATCAGAGATAAGTTACTGAA AATTTACAAATAAAATACAAGTGGATGTGTTATAATAAGTGCTTGACGATGAAAATATTGACTGAGCGCATATATATATT CTAACTGCCAGGATATGTACTAAACCTTACAGTTGAACATGAAAATATTGTGAGAAAACACTATTTCGTAACAAGTGTCA ATCAGGACCCAAATGCCTTACAACAAGCATAATCCATAACCTAGAAAATTAGGTAGGTTGAGAAACAACCCCTGAAATTC CAAGGACAAGAGACTAAAAGGCAATATTTCAATCACGAGCACTGACTGTCACAGAAGTGCATACTACATAAAGTTAAACG CCTAACTACGGCTAAGTGCTTCCAGAAATTCAATGGCTTACCTATCTAGCTTCAGCAGACGAATGAGTTACGGAACGGGT ATGCGATCACTCTGCAGTTTATTACTTATAATGAAATCTAATACTAGAGTAACAATCTGCATTACCTGTCCATCCACTCC CTGAATGGCACTTGATGCCTCCTCAAGAGTAGAGAAAGTAACAAAACCAAATCCTCTTGACCTACCGGACTCGCGATCCT TAATTATCCTAGC
CDS sequence (LotjaGi1g1v0213300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTTGTGGGTTGTTGCAGCTGCTGCTGGAGCTGGGTATTTGGCTAAATATTGGAACAAGATTTCAAAAGATGGTGA TAGCTCTTATCGTTTGTCTTCGGAGGATTCAAATTTTGAGAATCCTGAGTCCTCGAGCTGCCCCTTCTCCTTACTTAAAC AAGCGCGGAAGGGTGAATTGGGTAAAGATGTTTCTTTAGATAGAAGGGCTTCAAAGGGGAAGTCTTCAGATGTGGACTTG CCGGATGATCTTGTGACAGGAGAAGTGGCTTCTAACATTAGGCACTTCCAGAATTACAGCAACAGTGATGTCCTATCGAT ATCGAACTTAGTAGTACCGTTATCACAAAGTGACGGTAACTTCAAGAATTTTGAAGACGGAATTGAACAAAGCTCCAATA TTGGTGGCAATCATGGTTTCTTTGTTCCTGATTCTTCTGCCAAAGTGGTTCCTGTTCATAACTCTTCTGGACATAAAACC TTTCTCAGGACTAGAAATTTGTCTGGGCACATTAGTAAACCTTTAAATTCCTTAGAAAGTTGTTTTATGGCTCAGCTATA CAAAGAGCATGCCAAAATAGAAGAATACGTCTTTAGTCCTCTTTCATCGTCATCCACGACAACGAGGTCACTTCTTGTAA GCAATGGAAGCCAAATAATCAACCATGCAAATGATATTTCGTTAAGTGCATCATTTGGGATCAAGGAATATAAGTTGCAT AAAGACGCCAGTCAAGTAAGAGATGAAAATGTATTTGGGATTCCTTCCTTACCCAAACTCAGGACTTCAAATGAAGCGAA GAAGATGAAATTAAATGCATTCACTGGGCGAAGCAGAAGATTGAGCTCTTCCGGAGATTTGTTTAGCGGAAAACTCATCC ATACTCATTGTGATCCAACATTTCTCTTCAGTCTTGGGATTTCTTTCGGGATGATAGCTTCCATCGTGGAAAATAAAAAA GAAATGGATAGCCTAAGAGAACTGTTGAAGCAGACTGAAAACTTGGTTCAAGATCTACAAGAGGAACTAGAAATGAAAGA TTCATTGACTGTGAAGGAGATAAATAATGAAAATTATGGTTCCCAGGATACATGTGATCATTCCTCCTATGATAAGGAGC TAAATGAATTTTCCCCTGAAAAGCATATGGATAACTCTCCAAGAATTAACTGCAAAGAATCATATGATAAGGCAGAACTA AGTTCAGAATCTATAAGCAAGATTGAAGCTGAGCTTGAAGCTGAACTTGAGAGACTGGGGTTGGACATGAATGCATCAAG CCTGGAAGGAAAATTATCTGAGCTTGTTGAGCTTGAACCAGAGTTTGTGGCTGATTTTGCCAAGGGTGAGTTGCGAGTGG AGACTGTAGGTGGCAAAAACTTTGTACATCCAAAATCGAATGAGGTTGCCAACGACACCACACCTCTCCCTGGAAACTAT GCAGTTTTGCCTCATGAGCTGAGTTTGCGTTTGCATGAAGTTATACAATCTCAACTTGAGCAACGCGTGAAAGAGCTTGA GAGTGCCCTTGAAAACAGCCAGAGGAAAATACGGCTCATGGAATCAGAGCGTGAGGGTAATTCACAGAAGGGAGATTCCC TTACTAGTGGAAACCTGTTCACTTATGAAGACTGTGACACTATGTCACAGCCTTTAGTCCTCAATTTATCAGGTGAAGCT CTAGATGCATACAATGAGGCCTATGAAGAACTAATAAGGATAAATGACTCTGAAGAAAATTCACCATCAGGCACCCATGA TAGTGACCACAAAGAAGGTTTGCATTCACTTGATTGGAATGCTTTAGAGGTTCAGCATGATGGAGAAAATTGTTCCACAC CTTACTCAACAATTAATGGAAGGAGACTCTCAGGGGAGCTCTCTTCTACCCAGGTGACAATGTTCGAAGGTCAAAGTTCT AGGATCTATGAGTTAAATGATATAGGAGATGAAAGTTGTGATGGTGATAATGAGGTGGAAAGGCAATTGATTAGGCAAAT TGTTGAAAGGTCTAAGAAAGGTTCTTCTGTTTTTCAAAATGCACAAAAGATGTTGTATTCTATGGATGATGATGAACATT GA
Protein sequence (LotjaGi1g1v0213300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLWVVAAAAGAGYLAKYWNKISKDGDSSYRLSSEDSNFENPESSSCPFSLLKQARKGELGKDVSLDRRASKGKSSDVDL PDDLVTGEVASNIRHFQNYSNSDVLSISNLVVPLSQSDGNFKNFEDGIEQSSNIGGNHGFFVPDSSAKVVPVHNSSGHKT FLRTRNLSGHISKPLNSLESCFMAQLYKEHAKIEEYVFSPLSSSSTTTRSLLVSNGSQIINHANDISLSASFGIKEYKLH KDASQVRDENVFGIPSLPKLRTSNEAKKMKLNAFTGRSRRLSSSGDLFSGKLIHTHCDPTFLFSLGISFGMIASIVENKK EMDSLRELLKQTENLVQDLQEELEMKDSLTVKEINNENYGSQDTCDHSSYDKELNEFSPEKHMDNSPRINCKESYDKAEL SSESISKIEAELEAELERLGLDMNASSLEGKLSELVELEPEFVADFAKGELRVETVGGKNFVHPKSNEVANDTTPLPGNY AVLPHELSLRLHEVIQSQLEQRVKELESALENSQRKIRLMESEREGNSQKGDSLTSGNLFTYEDCDTMSQPLVLNLSGEA LDAYNEAYEELIRINDSEENSPSGTHDSDHKEGLHSLDWNALEVQHDGENCSTPYSTINGRRLSGELSSTQVTMFEGQSS RIYELNDIGDESCDGDNEVERQLIRQIVERSKKGSSVFQNAQKMLYSMDDDEH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 693 | 693 | 3.7E-261 | ||
| Phobius | 1 | 15 | 15 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| PANTHER | 1 | 693 | 693 | 3.7E-261 | – | |
| Phobius | 3 | 10 | 8 | - | – | |
| Phobius | 11 | 15 | 5 | - | – | |
| Phobius | 16 | 693 | 678 | - | – | |
| Coils | 315 | 349 | 35 | - | – | |
| Coils | 489 | 523 | 35 | - | – | |
| Coils | 561 | 581 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Asymmetric cell division | The asymmetric division of cells to produce two daughter cells with different developmental potentials. It is of fundamental significance for the generation of cell diversity. |
Expression pattern of LotjaGi1g1v0213300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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