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LotjaGi1g1v0236500.2

Overview

Field Value
Gene ID LotjaGi1g1v0236500
Transcript ID LotjaGi1g1v0236500.2
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Adenylate kinase; TAIR: AT5G50370.1 Adenylate kinase family protein; Swiss-Prot: sp|Q08480|KAD4_ORYSJ Adenylate kinase 4; TrEMBL-Plants: tr|I3SSY8|I3SSY8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0236500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:56282579..56286233) extracted from Lotus japonicus Gifu genome v1.2.

GCAGCAGCCGCCATGGCTTCACCCAATTTGGAAGATGTTGCCTCCGTCGATCTCATGACCGAACTCCTCCGTCGCATGAA GTGCGCCCCCAAGCCTGACAAGCGTGTCATTCTCATTGGTACTTTCTCTCTTCTTCAGATCCCCACATTCTGTTCTAATT CATGCTTCATTTTACAATGCTGTTAGGGTTTCTTTTGTGATTACCCCCATTTCCATTTGATTTGTTTTTTGTTCTCATTT TTATGATTTTTTCGCTTTGTTTTTTTTTTATAGGCAATAGTTGTTAGTAAATTAGTCTTCCTCAGGTTCGAACCCTAGAC CCTTCATCCCACTCAGCCCTTATGTCCCTACTACCTCTTACCGCTTTGTGAAAAGTGCACAACATTCTTATATTTTTGTG TGTGTGTGTTTTAATTTTCATGGTGTAAGATTGATCGGAACGTGGTTCATGTCTCTTTTTCTCTTGTGTTAATTCTCTTA TATTGCATTACTGGTCATCGTTTACTTGAGCTTTCTAGTTTATTTTACGCGATAGAGACCAGCAATTAATTTCTTGTTGT GTGATTAAATTGGGATTGCCTAGTTTGAAATTGTTTCCAACTTCCTACTACTGCACCTCTATAGTTTGTCGGAATGCCTC AGCGCAGGGATGGAATGAGAAAGAGTAAGGGGCGAAAGTTTAACATACTCAATAAAATGAACAATGACTAATTAAATGAT GTAGTGTAAATATTTTAAGAGGGTGAATGTCACATTTAAATATTCTATGAAGGATTTTTTTCTCTTTGGGGGCGACCGTC CCTTTTTTCTTATATGTAGTTTCGTCCCTGGCTAAGCATCATTAGTTGAAACTCGAAACACTTGCCACCTATGTTGCACT GATACGGCTGCAACAAAATTTAAAAAAATTAAGTTACGAGTACACTTATATAGAAGAATATATTTTCAACCATAATATAT ATTGTTGTTGAAATTAAAGAAGCATATCGGAGAGAAGGAGATTCGTGTTTGTGCATGCCGCAAAAAATGAAACATGAATT CTCTAACTTATCCACCATCAATCAATGAAGGTGAGCATTGACCAGGAAAGTACAAGATAATTGATTGATGCATATTAATG ACACGGGTAGGGTTTCAAGGGGTTTATGCTAATGATATAGGTAGGGGTTTCATCTTTGTATTCATAAAAAGAAAAAGAGA TAACTTAAAAAAATTTGTTTTAGTTAATGTGTTGTGCTCAAGAAGTATAAAAAGTTATTTCGGTAAGCATCCTGTGCTTA TTTACAAGTACCCTCCGTACGTGTATGGAAGCCAAAATGAAATACCCATGTTTGATACCATGCCATCATGAAATTATTTT ACATAAATATGTCTATGTATTGGTTTTGTGACTTTGTCTATATGTGGTTTGAAGCAAGTGCTGCTGATTTCCTCCCTATG ACTTTATCGTTGCTTGATTATTATTTGAAACTGGACTAAGTCAGAGCATGTGCTTTCTTTCCATGCCACATTTTATTATT TCTACCTTTTTGTGATTCTATTCTTTCTATTCATAAGACAGAAACATCAAAAGCTGCATATTGCTGCTTCCCTAAACTTT TGGGTTGAGGCAGTTTATATTACAAGAGGTAGTATGTGATTGTGAAGTATAATGTGTTTCTTAGTGTTGTGAATGAGGAG TTTCTTCTATTATCATCCTTTATTTCCATGATTATATTCTCTTACCTTGCAAATTCGGAACTGTAAAGCACAATACCAAT TTTGTCCTTAAAGTTTTAAATTGAACTTGAATGTGTTTAGAGGAGCTAGAATTGTAAATTGCGATGTGATTTCCTCTAAT CCTCTTGTTATAAATGGGACTGTCTCGTAGATTTATATGATTGTTTTGTAATGCTCTTGTCCGTCCATTGTATTTGCTTT TGTTTATTACACTAATATTCTGATCACTGTACAAGAAATTGTAGTCCTCACTCCTCAGGTAGGTTTATTCTCCAAAGTGC ATATTTGACTTGGTTAGTACATTTAAGATTCAAGCTTTTAGATTAAATATGTGATGGAATAAAAACTCCAAAGGGCGTAA ATACTTTGAAAATTGTTTGTGCAGGTCCACCTGGATCAGGAAAAGGAACCCAGTCACCAATTATAAAGGATGAGTACTGC TTGTGTCACTTAGCAACTGGTGATATGTTAAGAGCTGCTGTGGCAGCTAAAACCCCTCTTGGTGTTAAGGCTAAAGAAGC TATGGATCAGGTAAGGTGTCTGAGGATTTTCTTTATCTAATAAAATTTCTACTTTATATAGAGTTTTCTAATTTTGTATT ATGTTTTGAATTCAGGGACAACTTGTTTCTGACGACTTAGTTGTTGGCATTATAGATGAAGCAATGAAAAAACCATCATG TCAGAAAGGTTTCATTCTTGATGGTTTTCCAAGAACTGTGGTCCAAGCGCAGAAGGTATTACATAGTTTAACATCGAAGC TAAATGTTAAGTTCTGTGCTTATATACACAGACTAGTTTATCTGCAGTTCTTTACTATTTTACATGTTGTTGTCCATACT ATGAATGTTCATTTTCTCTGTTTTCTTTGCTTGCAGCTTGATGAGATGCTTGAAAAGCAGGGAGTTAAAGTTGACAAGGT TCTCAATTTTGCTATTGATGATGCAATCCTCGAGGAGCGGATTACTGGCCGCTGGATACACCCACCCAGTGGCAGAAGCT ACCATACAAAATTTGCACCTCCCAAGTTTCCTGGGGTTGATGATGTAAGTCTGCATCTTTGTGTATAAAAATGCTATTGG CAGAAATATAATTGATTGATGTTTATGGTTAAAAGCTTTTATCATCGTTCATTTATAAAATTAATGCTGAATATAACGTG CGCATTTCCTTGTTTCCCTAGGATCGAGTTAGCTAGGTTTTGGTAGTTTGCATGAAGTCATGGGTTTGTACATTGTTACC ACCATTATACACCAAAATATGATGTTTTGATTCTTTGGGAAATTATTGAGGGAACTGCTTGTTTTAGTTGCCGGCCATAC TGATGCTCTCTTTGAGAGGGGATATTGTTTTGAGAAAAAGTACTTGTGATATAACTTTGATTGCTGAGTTTGTTTTCCTA GGTTACTGGTGAACCTCTTATTCAGCGCAAGGATGACACTGCAGCCGTTCTTAAGTCACGACTGGAGGCATTCCACAAGC AAACTGAACCGGTAGGACTTTGAATCAAAATGCGTCAAATTAAATTTGAAATTGTGATATAAAGTAGCTGTCAACAATTA TATTTTGTTTAAATCCTTGATGATGTAATCTAATATTTTGTTCGTGCTTAATTTCAAGTTGATGTGAATTTCTTTCTCAT CATTTGGTTCAACTCCCCAACCCCCCCCCCCCCCCCTCCTTCAATTTTAGACATGTTGACTCAAGTCCTTCATTCTAAAA TTTCGGAAGAGTTCCTTCTCATTTTTCCAGTTTTGTAAAACTTACTCTTTTTCTTTTCATTTTTGGTCTTTGTTATCATG GTCTACAATGAAAATTTGTTCATTGGAATGCAGGTTATTGATTACTATTCAAAGAAGCACATTGTTGCTAATCTTCATGC TGAGAAACCTCCCAAAGAGGTGACAGCTGAAGTGGAGAAGGTGCTGTCTTCGTAG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0236500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTCACCCAATTTGGAAGATGTTGCCTCCGTCGATCTCATGACCGAACTCCTCCGTCGCATGAAGTGCGCCCCCAA GCCTGACAAGCGTGTCATTCTCATTGGTCCACCTGGATCAGGAAAAGGAACCCAGTCACCAATTATAAAGGATGAGTACT GCTTGTGTCACTTAGCAACTGGTGATATGTTAAGAGCTGCTGTGGCAGCTAAAACCCCTCTTGGTGTTAAGGCTAAAGAA GCTATGGATCAGGGACAACTTGTTTCTGACGACTTAGTTGTTGGCATTATAGATGAAGCAATGAAAAAACCATCATGTCA GAAAGGTTTCATTCTTGATGGTTTTCCAAGAACTGTGGTCCAAGCGCAGAAGCTTGATGAGATGCTTGAAAAGCAGGGAG TTAAAGTTGACAAGGTTCTCAATTTTGCTATTGATGATGCAATCCTCGAGGAGCGGATTACTGGCCGCTGGATACACCCA CCCAGTGGCAGAAGCTACCATACAAAATTTGCACCTCCCAAGTTTCCTGGGGTTGATGATGTTACTGGTGAACCTCTTAT TCAGCGCAAGGATGACACTGCAGCCGTTCTTAAGTCACGACTGGAGGCATTCCACAAGCAAACTGAACCGGTAGGACTTT GA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0236500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASPNLEDVASVDLMTELLRRMKCAPKPDKRVILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKE AMDQGQLVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKQGVKVDKVLNFAIDDAILEERITGRWIHP PSGRSYHTKFAPPKFPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVGL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.50.300
2 212 211 1.0E-76 –
PANTHER
PTHR23359:SF168
5 211 207 1.2E-130 –
PANTHER
PTHR23359
5 211 207 1.2E-130
IPR000850
SUPERFAMILY
SSF52540
28 211 184 1.04E-35
IPR027417
Hamap
MF_00235
30 212 183 43.193
IPR000850
TIGRFAM
TIGR01351
31 211 181 3.2E-69
IPR006259
CDD
cd01428
31 211 181 4.00019E-90
IPR000850
PRINTS
PR00094
33 46 14 3.6E-27
IPR000850
Pfam
PF00406
34 211 178 2.7E-55 –
PRINTS
PR00094
61 75 15 3.6E-27
IPR000850
PRINTS
PR00094
110 126 17 3.6E-27
IPR000850
ProSitePatterns
PS00113
110 121 12 -
IPR033690
Pfam
PF05191
156 191 36 1.4E-16
IPR007862
PRINTS
PR00094
189 204 16 3.6E-27
IPR000850

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004017
Molecular function Adenylate kinase activity Catalysis of the reaction: ATP + AMP = 2 ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006139
Biological process Nucleobase-containing compound metabolic process Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
Subterm of
GO:0016776
Molecular function Phosphotransferase activity, phosphate group as acceptor Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor).
Subterm of
GO:0019205
Molecular function Nucleobase-containing compound kinase activity Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0236500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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