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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0237200 |
| Transcript ID | LotjaGi1g1v0237200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Argininosuccinate synthase; TAIR: AT4G24830.1 arginosuccinate synthase family; Swiss-Prot: sp|Q9SZX3|ASSY_ARATH Argininosuccinate synthase, chloroplastic; TrEMBL-Plants: tr|G7J524|G7J524_MEDTR Argininosuccinate synthase; Found in the gene: LotjaGi1g1v0237200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:56477535..56481734) extracted from Lotus japonicus Gifu genome v1.2.
GTGAGTGTTAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGGTAGCTTCTATCTGTTCTCTGAACCAGTAACATCCATGGCT CCTCTAAATGCAGCTCTCACATATTCATGCCCAGCTATTGCTCCTGCTCGACATGCAAGAGGTGCACTCACCGTTTCTTT CTATTCCGCAATAGATAGAAGCTAAAAAATAATTTCATCTTGAAATGTTGTTGATGATCATTCATAGAGTAGAGTGGATT TTGGAAAACCCCATGTCATTTGGTTTTTCATAAAAAAGTTGGCATTTTGAGAACTGGGAATGAAGCTTTCTGGTCATGCA TGTTCCGTTTAATCTCTGTTAACTATTTTTTGGTGATTTTTTGTGTGCAGAGCAACTATTTCAGCACCATTTCTGCAAAA CAAATTCTTTGTCATCCAATGAGGTGGTCTTATATACAGTAACTCCTTAATTAAAATTTAAATTATCTGAGTTTTGATGG TGTTCTGAATTCTGATGATCCTACTTATTTTGGAATTCTGTGCTGTAGTTGGGGCCAAGAACAAGTGTTGTTGGTGCCAG GAAAACTCAAGGTGAGATACTCTTTGACTTTAACTCGTGCATGTTTGTAAATTCTTTAATCATTGATTCTGAAGCCAAGA TCAATTTCGGGGAGAAACTTTTGTGAGTATCTTTTGGGTGTCTGAATAGATTTTGAGAAAAGAAAAAGTTAATGCTATAA ATCACTTGGTTGATGAAGTGTGAACTCTACATAAAGCAGTTTTTCTAGTTCAATTGTTTATCTTGAAAAATATGAGCTTG GAACAATGGTGTTTGAGTTCAACATTTAAGTTTGATGTTTGTAAAAGTGATGAAATTTTCTTGACATGCAGTTATAAAAG TAGTGCTGCAAGATATACAAATTCCTGAAACCAAGAATGTTACCGGGTTACGTGGGAAATTGAATAAGGTTGTGCTGGCT TACAGTGGTGGCTTAGACACATCAGTGGTTGTCCCCTGGCTGAGGTATATAACTTGTTCTGGTCCTTTTATTCAAAGTTC ACCTAATTTGGCATTTTCTATCACCTTTTGTATAACAGTCTGTAGATAACCCTGTTAATTCACCTGTGCCCTGTATTCTT ATTGAAAATTTACATGTAGATACCTTTCGCGAAATTGTGATTATTACTTATACGAAGGTTTATTACATGCTTGCTTGTCC CTAGCAGAATCGTTTCCTTGTCATATCGCTTATTTGATGACTTTTGCCTTGCAGAGAGAACTACGGTTGTGATGTTGTTT GCTTCACTGCTGACGTTGGTCAAGTATGTTATATCTTGAAAATTCACTTTCTATAATCAAGGTTACTATTTGGTAAATTG TGTTATTGGAATAGATGTTGAAAGATTGTAAAATTTTGACTGGGGAAACTTGCTTTACACCATTTTTATATGCTGCATGT ATGGTAACAAACACTTAATTCCATAGGGTGCACAAGAATTGGAAGGTTTAGAAGAGAAGGCCAAAGCCAGTGGAGCCTCC CAGTTAGTTGTGAAGGATTTGAAGGAGGAATTTGTTAGAGACTATGTATTCCCTTGCCTGCGTGCTGGTGCACTTTATGA GAGGAAATACTTGCTTGGAACGGCAATATCCCGCCCTGTGATTGCAAAGGTACACTTCTGCTTAAGTTTGATGTTCTTGT CTTCCATCTAAGTTAGTAGTAGCTATGTCAACCCTTAGAAATATTCCTTTTTTTGCTTTATTTCTTATGTGTGAGATATT GTCCTCAGCAATCAGCATTAGTTCTCTGTCATTTCTTTTTGCTCCAATATCATGGCCGCGTTTGGAAGAGCTTGTTTTAG CTCTTCTCATAGAAATGACTTGACCAGAAGCTGTTTTGAGCTTACTTTCATAAGCTTTTCAGATTAGCTTATGAATAAAC ACTTATACCTACATATAAGCAATTTTGCACTTATTTCAGTGAGTTTCTCAAATTAGCTTATGAATAAGCGCTTACGTGAT AAGCTCTTATTGCCATAAGTGCTTAATTAAACTATTTACCCAAATTCACCCTATATTTCTCTTAATGGAGTCATTTCTTC TGTTAGCTCATAGTGCAGTATACACTTATATTTTTGAAGAATCATAATGATCAGGCAATGACATATATATATATTTTTGA ACTTATATTAATGCCTACTGAATTGATGATAGGCCATGGTGGATATTGCCAAAGAAGTTGGAGCAGATGCTGTCTCCCAT GGTTGTACAGGAAAAGGAAATGATCAGGCATGTACTTTATTATCAACTGATAACATTTCATCATGTCAATTATTTTGTTA TATTTACGTATGGTTATTCAGGTTCGGTTTGAGCTCTCTTTTTTTGCTCTGAATCCCAAGTTAAATGTTGTGGCTCCATG GAGGGAGTGGGATATTACAGGGAGAGAAGATGCTATAGAGTATGCTAAGAAGCATAATGTACCTGTTCCTGTAACCAAGA AATCAATATACAGCAGGGACAGGAACCTTTGGCACATAACCCATGAGGTGAGTTTTTCTTGAAGTTAACTAGGTTTTTAT GATTTGTCTCATGGCTTCTTTTGTAGTCTAAGATCACTTTGAAAAACTTCGGGGAAATTTTCATGATCTGCAAAGTTATT AATTGGATCATCTCAAGTCGAAGGGGTAGCAATAGAGAAGAACAGTTTTTTTCTTATTAGTGCAAATGTTCTCATCAGCA TCTTCATTCCATGATTGGATATTACTCTTATTAATGATTCATGTATGCCTTTTCATTGTACATTTTGTTATTTCTTCTAA AAGCAAGAAAAACTTATAATTGAGTACCGAATGTAGACACATGAAGTATCAAATTGTAATGTGAAACCTCATTCCGATGC TGTAATATGATAATTGGTTTATGCTCATGTACTCCAAAACTATTGATTGGATATTTGACATGTTAACTGCTTCTCTTATA TTTCCAATTTGTGCTACTGAAGGGTGATGTTTTGGAAGACCCAGCAAATGAACCTAAAAAGGATATGTACATGATAACTG CAGACCCAGAGGATGCTCCCAATGAACCAGAGTAAGCATGTTTTCCACTGGCACAGATAAAGTTATTTTACAAATAAAAA TCTTAATAATATTGAAACAGATAAAGTTATTTTACTGTTATCTTAAGTTTAAAATAGGCTGTTTCAGGACATATTAACCC AGTACTCTATGTCCATGCTTCTTTGGCTTCCTGAAAATGCACCAAGCTACATGTTCAAACTTTACATCATTAGGTCATTT AGGTGTATAGCATGTTTGGATGATCTTATGTTTACTCAGAATCAATTTTGATGCCCAGAAGCTACTTACATAAGCTTTTC CCCATGATCGAATTTTCTAATAAAATCAATTGTAGAAGAATTTACAAACATGCACGTAGTTTCCCAACTTGCTCAGACAC TTTAGCTATTTTGAACGTGATGCAGATACGTGGAAATCGGGATAGAGTATGGTGTTCCTGTATCAGTGAATGGGAAGAGG CTTTCACCAGGAAACTTGGTTGCCAAGCTGAATGAGATCGGTGGAAGGAACGGAATTGGCCGAGTCGACCTTGTTGAAGA CAGGATTGTAGGCATGAAGAGCCGTGGAGTTTATGAAACCCCTGGTGGCACCATCCTCTTCGATGCAGTGAGGGACTTGG AGGGCTTAACACTTGACAGAGAAACACTTCAGCTGAAAGACACATTGGCCCTCAAGTATGCAGAGTTAGTTTATGCTGGG AGGTGGTTTGATCCGCTCCGCGAGTCCTTGGACGCCTTCATGCATAAGATCACAGAGACCACAACAGGCTCAGTGACTTT GAAGCTCTACAAAGGTTCTACTGCTGTGACTGGAAGGAAGAGCCCTTATAATCTTTACAGAGAAGATATTTCTTCATTTG ATACTGGGGATTTATACAATCATGCTGATGCTGTTGGCTTTATCAAGCTTTACGGTCTTCCAATGAGGATTAGAGCAATG ATGCAACAAGGCCTCTAGATGGTGCTTGATTTCTTTATGGCTTTGTTTTAGACTATGCTTTCCAATTTCCATGCACTTTG ATTTATGTTTGTGGGAACCTTTGCTCTGAATAAAACTGTTCTCACTTATGGGAGCACAAAATTCAAACATTTCAACTCAA TCAATTCAGACTCAATATTTATCTTTGAAGCTTATTTACA
CDS sequence (LotjaGi1g1v0237200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCCTCTAAATGCAGCTCTCACATATTCATGCCCAGCTATTGCTCCTGCTCGACATGCAAGAGAGCAACTATTTCA GCACCATTTCTGCAAAACAAATTCTTTGTCATCCAATGAGTTGGGGCCAAGAACAAGTGTTGTTGGTGCCAGGAAAACTC AAGTTATAAAAGTAGTGCTGCAAGATATACAAATTCCTGAAACCAAGAATGTTACCGGGTTACGTGGGAAATTGAATAAG GTTGTGCTGGCTTACAGTGGTGGCTTAGACACATCAGTGGTTGTCCCCTGGCTGAGAGAGAACTACGGTTGTGATGTTGT TTGCTTCACTGCTGACGTTGGTCAAGGTGCACAAGAATTGGAAGGTTTAGAAGAGAAGGCCAAAGCCAGTGGAGCCTCCC AGTTAGTTGTGAAGGATTTGAAGGAGGAATTTGTTAGAGACTATGTATTCCCTTGCCTGCGTGCTGGTGCACTTTATGAG AGGAAATACTTGCTTGGAACGGCAATATCCCGCCCTGTGATTGCAAAGGCCATGGTGGATATTGCCAAAGAAGTTGGAGC AGATGCTGTCTCCCATGGTTGTACAGGAAAAGGAAATGATCAGGTTCGGTTTGAGCTCTCTTTTTTTGCTCTGAATCCCA AGTTAAATGTTGTGGCTCCATGGAGGGAGTGGGATATTACAGGGAGAGAAGATGCTATAGAGTATGCTAAGAAGCATAAT GTACCTGTTCCTGTAACCAAGAAATCAATATACAGCAGGGACAGGAACCTTTGGCACATAACCCATGAGGGTGATGTTTT GGAAGACCCAGCAAATGAACCTAAAAAGGATATGTACATGATAACTGCAGACCCAGAGGATGCTCCCAATGAACCAGAAT ACGTGGAAATCGGGATAGAGTATGGTGTTCCTGTATCAGTGAATGGGAAGAGGCTTTCACCAGGAAACTTGGTTGCCAAG CTGAATGAGATCGGTGGAAGGAACGGAATTGGCCGAGTCGACCTTGTTGAAGACAGGATTGTAGGCATGAAGAGCCGTGG AGTTTATGAAACCCCTGGTGGCACCATCCTCTTCGATGCAGTGAGGGACTTGGAGGGCTTAACACTTGACAGAGAAACAC TTCAGCTGAAAGACACATTGGCCCTCAAGTATGCAGAGTTAGTTTATGCTGGGAGGTGGTTTGATCCGCTCCGCGAGTCC TTGGACGCCTTCATGCATAAGATCACAGAGACCACAACAGGCTCAGTGACTTTGAAGCTCTACAAAGGTTCTACTGCTGT GACTGGAAGGAAGAGCCCTTATAATCTTTACAGAGAAGATATTTCTTCATTTGATACTGGGGATTTATACAATCATGCTG ATGCTGTTGGCTTTATCAAGCTTTACGGTCTTCCAATGAGGATTAGAGCAATGATGCAACAAGGCCTCTAG
Protein sequence (LotjaGi1g1v0237200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPLNAALTYSCPAIAPARHAREQLFQHHFCKTNSLSSNELGPRTSVVGARKTQVIKVVLQDIQIPETKNVTGLRGKLNK VVLAYSGGLDTSVVVPWLRENYGCDVVCFTADVGQGAQELEGLEEKAKASGASQLVVKDLKEEFVRDYVFPCLRAGALYE RKYLLGTAISRPVIAKAMVDIAKEVGADAVSHGCTGKGNDQVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAKKHN VPVPVTKKSIYSRDRNLWHITHEGDVLEDPANEPKKDMYMITADPEDAPNEPEYVEIGIEYGVPVSVNGKRLSPGNLVAK LNEIGGRNGIGRVDLVEDRIVGMKSRGVYETPGGTILFDAVRDLEGLTLDRETLQLKDTLALKYAELVYAGRWFDPLRES LDAFMHKITETTTGSVTLKLYKGSTAVTGRKSPYNLYREDISSFDTGDLYNHADAVGFIKLYGLPMRIRAMMQQGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 76 | 474 | 399 | 2.4E-196 | – | |
| PANTHER | 76 | 474 | 399 | 2.4E-196 | ||
| Hamap | 78 | 474 | 397 | 54.193 | ||
| SUPERFAMILY | 79 | 243 | 165 | 1.43E-47 | – | |
| Gene3D | 79 | 249 | 171 | 1.6E-71 | ||
| TIGRFAM | 80 | 470 | 391 | 2.7E-153 | ||
| CDD | 81 | 465 | 385 | 0.0 | ||
| Pfam | 82 | 468 | 387 | 4.7E-161 | ||
| ProSitePatterns | 84 | 92 | 9 | - | ||
| ProSitePatterns | 193 | 204 | 12 | - | ||
| SUPERFAMILY | 248 | 474 | 227 | 1.12E-91 | ||
| Gene3D | 251 | 475 | 225 | 4.8E-96 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Argininosuccinate synthase activity | Catalysis of the reaction: ATP + L-citrulline + L-aspartate = AMP + diphosphate + (N(omega)-L-arginino)succinate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Arginine biosynthetic process | The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid. |
Expression pattern of LotjaGi1g1v0237200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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