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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR024074
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 21 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.967s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0059219.1
n.a. Argininosuccinate synthase [Medicago truncatula] gi|357463609|ref|XP_003602086.1| chr0 19554319 19554598 -
2 domain predictions
1 GO term
Lj0g3v0059229.1
n.a. n.a. chr0 19554319 19554598 -
2 domain predictions
1 GO term
Lj0g3v0059249.1
n.a. Argininosuccinate synthase [Medicago truncatula] gi|357463609|ref|XP_003602086.1| chr0 19554649 19555298 -
2 domain predictions
1 GO term
Lj0g3v0107149.1
n.a. PREDICTED: argininosuccinate synthase, chloroplastic-like [Cicer arietinum] gi|502176214|ref|XP_004515824.1| chr0 46168210 46174001 +
2 domain predictions
1 GO term
Lj1g3v0970980.1
n.a. Argininosuccinate synthase [Medicago truncatula] gi|357463609|ref|XP_003602086.1| chr1 12332783 12334702 +
2 domain predictions
1 GO term
Lj1g3v3137750.1
n.a. Argininosuccinate synthase [Medicago truncatula] gi|357463609|ref|XP_003602086.1| chr1 35682101 35687359 -
2 domain predictions
1 GO term
Lj1g3v3137750.2
n.a. Argininosuccinate synthase [Medicago truncatula] gi|357463609|ref|XP_003602086.1| chr1 35682101 35686522 -
2 domain predictions
1 GO term
Lj1g3v3641920.2
n.a. Argininosuccinate synthase [Medicago truncatula] gi|357463609|ref|XP_003602086.1| chr1 41895261 41897879 +
2 domain predictions
1 GO term
Lj1g3v3641930.1
n.a. Argininosuccinate synthase [Medicago truncatula] gi|357463609|ref|XP_003602086.1| chr1 41897979 41898258 +
2 domain predictions
1 GO term
Lj1g3v3641940.1
n.a. n.a. chr1 41897979 41898258 +
2 domain predictions
1 GO term
Lj3g3v2515360.1
n.a. PREDICTED: LOW QUALITY PROTEIN: argininosuccinate synthase, chloroplastic-like [Glycine max] gi|356514007|ref|XP_003525699.1| chr3 30751908 30753364 -
2 domain predictions
1 GO term
Lj3g3v2515370.1
n.a. n.a. chr3 30751914 30753364 -
2 domain predictions
1 GO term
LotjaGi1g1v0236700.1
n.a. Argininosuccinate synthase; TAIR: AT4G24830.1 arginosuccinate synthase family; Swiss-Prot: sp|Q9SZX3|ASSY_ARATH Argininosuccinate synthase, chloroplastic; TrEMBL-Plants: tr|G7J524|G7J524_MEDTR Argininosuccinate synthase; Found in the gene: LotjaGi1g1v0236700 LjG1.1_chr1 56379081 56385143 -
3 domain predictions
1 GO term
LotjaGi1g1v0237100_LC.1
n.a. Argininosuccinate synthase; TAIR: AT4G24830.1 arginosuccinate synthase family; Swiss-Prot: sp|Q9SZX3|ASSY_ARATH Argininosuccinate synthase, chloroplastic; TrEMBL-Plants: tr|A0A0L9TQ70|A0A0L9TQ70_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0237100_LC LjG1.1_chr1 56424357 56425466 -
2 domain predictions
1 GO term
LotjaGi1g1v0237200.1
n.a. Argininosuccinate synthase; TAIR: AT4G24830.1 arginosuccinate synthase family; Swiss-Prot: sp|Q9SZX3|ASSY_ARATH Argininosuccinate synthase, chloroplastic; TrEMBL-Plants: tr|G7J524|G7J524_MEDTR Argininosuccinate synthase; Found in the gene: LotjaGi1g1v0237200 LjG1.1_chr1 56477535 56481734 +
3 domain predictions
1 GO term
LotjaGi1g1v0527800.1
n.a. Argininosuccinate synthase; TAIR: AT4G24830.1 arginosuccinate synthase family; Swiss-Prot: sp|Q9SZX3|ASSY_ARATH Argininosuccinate synthase, chloroplastic; TrEMBL-Plants: tr|G7J524|G7J524_MEDTR Argininosuccinate synthase; Found in the gene: LotjaGi1g1v0527800 LjG1.1_chr1 105467818 105473199 -
3 domain predictions
1 GO term
LotjaGi1g1v0607700.1
n.a. Argininosuccinate synthase; TAIR: AT4G24830.1 arginosuccinate synthase family; Swiss-Prot: sp|Q9SZX3|ASSY_ARATH Argininosuccinate synthase, chloroplastic; TrEMBL-Plants: tr|G7J524|G7J524_MEDTR Argininosuccinate synthase; Found in the gene: LotjaGi1g1v0607700 LjG1.1_chr1 115232191 115237273 +
3 domain predictions
1 GO term
LotjaGi1g1v0607700.2
n.a. Argininosuccinate synthase; TAIR: AT4G24830.1 arginosuccinate synthase family; Swiss-Prot: sp|Q9SZX3|ASSY_ARATH Argininosuccinate synthase, chloroplastic; TrEMBL-Plants: tr|G7J524|G7J524_MEDTR Argininosuccinate synthase; Found in the gene: LotjaGi1g1v0607700 LjG1.1_chr1 115233458 115236909 +
3 domain predictions
1 GO term
LotjaGi2g1v0122200.1
n.a. Argininosuccinate synthase; TAIR: AT4G24830.1 arginosuccinate synthase family; Swiss-Prot: sp|Q9SZX3|ASSY_ARATH Argininosuccinate synthase, chloroplastic; TrEMBL-Plants: tr|I1MUN6|I1MUN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0122200 LjG1.1_chr2 44993541 45000663 +
3 domain predictions
1 GO term
LotjaGi4g1v0223000.1
n.a. Argininosuccinate synthase; TAIR: AT4G24830.1 arginosuccinate synthase family; Swiss-Prot: sp|Q9SZX3|ASSY_ARATH Argininosuccinate synthase, chloroplastic; TrEMBL-Plants: tr|I1MUN6|I1MUN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0223000 LjG1.1_chr4 52791330 52795981 -
3 domain predictions
1 GO term
LotjaGi4g1v0223000.2
n.a. Argininosuccinate synthase; TAIR: AT4G24830.1 arginosuccinate synthase family; Swiss-Prot: sp|Q9SZX3|ASSY_ARATH Argininosuccinate synthase, chloroplastic; TrEMBL-Plants: tr|G7JWM6|G7JWM6_MEDTR Argininosuccinate synthase; Found in the gene: LotjaGi4g1v0223000 LjG1.1_chr4 52791555 52795070 -
3 domain predictions
1 GO term