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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0246500 |
| Transcript ID | LotjaGi1g1v0246500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sulfate transporter 1; TAIR: AT1G22150.1 sulfate transporter 1;3; Swiss-Prot: sp|Q9FEP7|SUT13_ARATH Sulfate transporter 1.3; TrEMBL-Plants: tr|I1KA20|I1KA20_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0246500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:59235524..59239591) extracted from Lotus japonicus Gifu genome v1.2.
TTACAGAGTGAAGGTTCATTGTTGAGGTCTTAATAATGGATTCTTCTCCTGCTGATGAAGAACTTGAAAGAAAGGAGATG TATGCACCATACCTCCACAAAGTGGCAGTTCCTCCAAAACAGAACCTCTTCAAGGAATTCCAATCCACTGTGAAAGAAAC ATTCTTCTCCGACGATCCTCTACGATCCTTCAAAGATCAAACTAAATCGAAGAAGCTCATCCTCGGTGTCGAGGCCATAT TCCCCATACTTAACTGGGGGAGAGCTTACAACCTTAAAAAATTCAGGGGGGATGTCATATCTGGTCTCACTATTGCAAGT CTTGCCATTCCTCAGGTAATAATTAAGTTTGCTTTACAATGATGATTTTGAGCTTCTCAAGAAATGGAGGTTAATAATAG TACGTAGTTATACATAGAGCATGTTTGGATACATGGTAGATTTTCGAATTGGAAGGAGAATTGATTATGGGAAAAGCTAC TCCCAGTTAGCTTTTGTGGTAGCAGAATTGATTCTGGAAGATCTAAACGTGAATCCAAACATACTAATAATCCATATTAC CCATTTTTTGAGTTTCTCATACTTGTCTTGAAAAACAGGATATTGGATATGCCAAGCTTGCACATTTGGCTCCACAATAT GGACTGTGTAAGACTCTTGTCTCTCATCAACAGCTCAAGTTGCCAATGGCGTTTTTTCTTTGAATGTATTGGATATTTAA CATCTTGTGTTAAATCATTAAGGACAGTGTGATTTCACACGTCTTAGGCTTTGATTGATTTTCTTTTCTAACAATTTTTA CAACAGGATGTTGAACTGAAATCTTGTTGCCTTATGTTCTACCCCTTTACAGACTCAAGCTTTGTTCCTCCTCTGATATA TTCTGCCATGGGAAGTTCTCGCGACATTGCAATAGGACCGGTAGCAGTGGTTTCTCTCTTGATGGGTACTTTGCTCAGTA ATGAGATTGATCCTGTTACAAACGCTGAAGAATATCGGCGACTCGCATTTACAGCCACATTTTTTGCCGGGATTACTCAA GCAACACTTGGGATTTTCAGGTATGACACCTCCACACATCTCTATAAGGGATTTTTTATTTAAATCTTGCCACCTCTCAA GTTTATGTCCTGTACCACTAAACATAAGTTCATGTTTTGGAAAATCATTGTGGGTAGAAGCATGTTTGGATTGACTTCTA TGATTTTGTCTACCATGATTTTGGCTTCACTGTTGTTTTCGAACAAGTTTTCAAATATGCACTAAACTCTTTATTACACA ATGATAACCTTATTGTTGGTTTGACTTCTATGATCAGGTTAGGATTCTTGATTGACTTTCTATCCCATGCTGCTGTTGTT GGTTTCATGGGGGGTGCTGCCATTACAATTGCCCTACAACAACTTAAGGGCTTCCTCGGCATTAAAACTAAAGATTTCAC CACCAAAACTAATATTGTCTCAGTGATGCGTTCAGTGTTCTCATCAGCCCATCATGGAGTATGTTCTTTCTCTATCACTC AATGTAACATTAAAATTATTAAATTATAAATTAACATGAGTCAAATTGATTAATTAACAGGTATCTAATCTGAAATATTA AAATTGCTTGCTAGCACATATTTGATTAATGATCTAATATATAACATCTTGCAGTGGAACTGGCAAACTATAGTAATTGG AGCTAGCTTTTTGGGTTTTCTTCTGGTCGCCAAATATATTGTATGACATTAGACCCCCCTAATCATTTCACCAATTTTCT TCAATTAATGTTAGAGTTGTAAATTGTTTTCTCATGGTTTTCATTCTATGTGGATCAGGGAAAGAAGAACAAGAAATTCT TCTGGGTGCCAGCAATCGCGCCATTGATATCAGTAGTGCTGTCCACTTTTTTCGTGTTTATAACCCGTGCAGATAAGCAA GGTGTAGCGATTGTAAGTACATAGTTTATGATTAATTGATAGTTAAAGGGACAAAATATAAGTTAGAGCAGAACAACTAA AGTTGTTTTTCCCTTGATATGTGAAGGTGAATTACATTGAGAAAGGGATCAATCCTTCATCTGTTAGTGAAATTTACTTT AGCGGCGAAAACCTCGGGAAAGGTTTTAGAATTGGTGTCTTGGCAGGAATGATAGCACTGACTGTAAGTAAAATTTGTCA GTAACACCTTTTCTTGAAGAGTATTTGACCATTTACTTCTATTATAGTTCTGATTAAACAAGTACAATTTTGTTCTCAGG AAGCTGTAGCGATTGGAAGAACATTTGCATCTATGAAGGACTATCAACTAGATGGGAACAAGGAAATGGTAGCATTAGGA GCAATGAATATTGTTGGTTCCATGACTTCCTGTTATGTGGCAACTGGTAAGCTCAAAATTAAGATTCATGACCCTAACTT CTTCTAGTCATCAATTACATGCTTAGATAAGATGTATTAACTAATAGCACGTTCGGACCAGTTTTTCTTTTATCATAATC AATTCTAGCACCCAGAAGCTACTCACAAAAGCATCTACCTACAGTCAAGTTGGTTTAAGTCTCTGATCTATCTTCTTGTA AATTCAATTCAGGTTCTTTCTCTCGGTCCGCGGTGAATTACATGGCTGGCTGCCAAACTGCGGTCTCTAATATTGTGATG GCAATAGCTGTGTTCTTAACTCTTGAGTTCTTAACTCCTCTTTTTAAGTACACTCCAAATGCCATTCTTGCTGCTATCAT CATTGCTGCTGTCATCAGCCTTGTAGACATTCAGGCAGCCATATTGATCTGGAAGGTTGACAAGTTTGATTTTATTGCTT GCATGGGAGCGTTCTTCGGGGTTGTTTTCGTCTCAGTTGAGATTGGACTTCTGATCGCGGTAAGTAATACTAATACTAAT GCTCAGTGCACGTTTGAAAATTCTTTTACAACTGAGTCTAAAGCCAAAATCAATTTTGGAGACTTTTGAGTTTCAAAATT AATTCTCAGAAACTTGGGCGGCAGGTCTCCATATCGTTCGCAAAGATCCTACTACAAGTCACGAGGCCCCGAACTGCTAT TCTGGGAAAGATTCCTAGGACTTCTGTCTATAGAAACATCCAACAATACCCAGAAGCTAGTAAGGTTCCTGGTGTACTGA TTGTGAGAGTTGATTCTGCTGTATATTTTTCCAACTCCAATTATGTTAAAGAAAGGTAAAGATTTGTTCCTCCTCTGTTT GTACTTTCATCAGATAAGATATTTTCATTTTTTTTGTTCTCTCTTTTGACTGAAATATATGAAGTTAAGCAATGATTTAA AAGTTTTTTGGCAATAATCTAAAAGTCTAAGAACAGATATGTGATTTGAAAGATATATAGCAGCGATCACATGAAGTTAA TTTATAGATGTAGATGTGAAAATACAAATCATTTGTTAATCATGAGAATAATATAAACAATTTCTAACAAGTATCTTATG AGAACTACTTTATAATATTTGATTGGTAGAGGATTTGTATCTTCAATTTATCTTTCATTAAATACAAATGCTACCCTCTT CTCAGGATATTGAGATGGCTGATAGATGAAGAAGAAAAAGTGAAAGGAGAGTACCACATAAAAATCCAGTTTTTGATAGT TGAAATGTCACGTAAGAGTCACTATCTTTGCCCCTTCAACTTATTTTAGCTTCATTCATTTTCAGGTGGTTGTTAATTAC AATATACTAATAATTTTATAATGTTTTTGTGGCAGCCGTTACTGACATAGATACCAGTGGCATTCATGCCTTTGAAGAGT TACACAGAAGTCTTAAAAAGAGAGGTGTTGAGGTAGTAATAACCAAATTATATGTAACTTTGCATAAGCATATGAATGAT TAGAAAACAATTCAAGAAACTGATATTTTGTGATGAGGAATAAGAATATTATCTCACCAAATTGTGTTTGTGTTTGTACA GCTTGTTCTTGCAAATCCTGGTCCTGCAGTGACAGACAAGCTCTACACATCGAATTTCGCCAACTTAATCGGCGAGGACA AGATCTTCGTCACTGTTGCAGAGGCTGTTGCACACTGTTCTCCCAAGCTGGCTGAGGAGGAACCATGA
CDS sequence (LotjaGi1g1v0246500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTCTTCTCCTGCTGATGAAGAACTTGAAAGAAAGGAGATGTATGCACCATACCTCCACAAAGTGGCAGTTCCTCC AAAACAGAACCTCTTCAAGGAATTCCAATCCACTGTGAAAGAAACATTCTTCTCCGACGATCCTCTACGATCCTTCAAAG ATCAAACTAAATCGAAGAAGCTCATCCTCGGTGTCGAGGCCATATTCCCCATACTTAACTGGGGGAGAGCTTACAACCTT AAAAAATTCAGGGGGGATGTCATATCTGGTCTCACTATTGCAAGTCTTGCCATTCCTCAGGATATTGGATATGCCAAGCT TGCACATTTGGCTCCACAATATGGACTGTACTCAAGCTTTGTTCCTCCTCTGATATATTCTGCCATGGGAAGTTCTCGCG ACATTGCAATAGGACCGGTAGCAGTGGTTTCTCTCTTGATGGGTACTTTGCTCAGTAATGAGATTGATCCTGTTACAAAC GCTGAAGAATATCGGCGACTCGCATTTACAGCCACATTTTTTGCCGGGATTACTCAAGCAACACTTGGGATTTTCAGGTT AGGATTCTTGATTGACTTTCTATCCCATGCTGCTGTTGTTGGTTTCATGGGGGGTGCTGCCATTACAATTGCCCTACAAC AACTTAAGGGCTTCCTCGGCATTAAAACTAAAGATTTCACCACCAAAACTAATATTGTCTCAGTGATGCGTTCAGTGTTC TCATCAGCCCATCATGGATGGAACTGGCAAACTATAGTAATTGGAGCTAGCTTTTTGGGTTTTCTTCTGGTCGCCAAATA TATTGGAAAGAAGAACAAGAAATTCTTCTGGGTGCCAGCAATCGCGCCATTGATATCAGTAGTGCTGTCCACTTTTTTCG TGTTTATAACCCGTGCAGATAAGCAAGGTGTAGCGATTGTGAATTACATTGAGAAAGGGATCAATCCTTCATCTGTTAGT GAAATTTACTTTAGCGGCGAAAACCTCGGGAAAGGTTTTAGAATTGGTGTCTTGGCAGGAATGATAGCACTGACTGAAGC TGTAGCGATTGGAAGAACATTTGCATCTATGAAGGACTATCAACTAGATGGGAACAAGGAAATGGTAGCATTAGGAGCAA TGAATATTGTTGGTTCCATGACTTCCTGTTATGTGGCAACTGGTTCTTTCTCTCGGTCCGCGGTGAATTACATGGCTGGC TGCCAAACTGCGGTCTCTAATATTGTGATGGCAATAGCTGTGTTCTTAACTCTTGAGTTCTTAACTCCTCTTTTTAAGTA CACTCCAAATGCCATTCTTGCTGCTATCATCATTGCTGCTGTCATCAGCCTTGTAGACATTCAGGCAGCCATATTGATCT GGAAGGTTGACAAGTTTGATTTTATTGCTTGCATGGGAGCGTTCTTCGGGGTTGTTTTCGTCTCAGTTGAGATTGGACTT CTGATCGCGGTCTCCATATCGTTCGCAAAGATCCTACTACAAGTCACGAGGCCCCGAACTGCTATTCTGGGAAAGATTCC TAGGACTTCTGTCTATAGAAACATCCAACAATACCCAGAAGCTAGTAAGGTTCCTGGTGTACTGATTGTGAGAGTTGATT CTGCTGTATATTTTTCCAACTCCAATTATGTTAAAGAAAGGATATTGAGATGGCTGATAGATGAAGAAGAAAAAGTGAAA GGAGAGTACCACATAAAAATCCAGTTTTTGATAGTTGAAATGTCACCCGTTACTGACATAGATACCAGTGGCATTCATGC CTTTGAAGAGTTACACAGAAGTCTTAAAAAGAGAGGTGTTGAGCTTGTTCTTGCAAATCCTGGTCCTGCAGTGACAGACA AGCTCTACACATCGAATTTCGCCAACTTAATCGGCGAGGACAAGATCTTCGTCACTGTTGCAGAGGCTGTTGCACACTGT TCTCCCAAGCTGGCTGAGGAGGAACCATGA
Protein sequence (LotjaGi1g1v0246500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSSPADEELERKEMYAPYLHKVAVPPKQNLFKEFQSTVKETFFSDDPLRSFKDQTKSKKLILGVEAIFPILNWGRAYNL KKFRGDVISGLTIASLAIPQDIGYAKLAHLAPQYGLYSSFVPPLIYSAMGSSRDIAIGPVAVVSLLMGTLLSNEIDPVTN AEEYRRLAFTATFFAGITQATLGIFRLGFLIDFLSHAAVVGFMGGAAITIALQQLKGFLGIKTKDFTTKTNIVSVMRSVF SSAHHGWNWQTIVIGASFLGFLLVAKYIGKKNKKFFWVPAIAPLISVVLSTFFVFITRADKQGVAIVNYIEKGINPSSVS EIYFSGENLGKGFRIGVLAGMIALTEAVAIGRTFASMKDYQLDGNKEMVALGAMNIVGSMTSCYVATGSFSRSAVNYMAG CQTAVSNIVMAIAVFLTLEFLTPLFKYTPNAILAAIIIAAVISLVDIQAAILIWKVDKFDFIACMGAFFGVVFVSVEIGL LIAVSISFAKILLQVTRPRTAILGKIPRTSVYRNIQQYPEASKVPGVLIVRVDSAVYFSNSNYVKERILRWLIDEEEKVK GEYHIKIQFLIVEMSPVTDIDTSGIHAFEELHRSLKKRGVELVLANPGPAVTDKLYTSNFANLIGEDKIFVTVAEAVAHC SPKLAEEEP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 134 | 134 | - | – | |
| PANTHER | 13 | 647 | 635 | 0.0 | – | |
| PANTHER | 13 | 647 | 635 | 0.0 | ||
| TIGRFAM | 70 | 636 | 567 | 8.3E-213 | ||
| Pfam | 83 | 465 | 383 | 6.6E-127 | ||
| ProSitePatterns | 112 | 133 | 22 | - | ||
| TMHMM | 135 | 154 | 20 | - | – | |
| Phobius | 135 | 155 | 21 | - | – | |
| Phobius | 156 | 166 | 11 | - | – | |
| TMHMM | 167 | 189 | 23 | - | – | |
| Phobius | 167 | 185 | 19 | - | – | |
| Phobius | 186 | 196 | 11 | - | – | |
| Phobius | 197 | 215 | 19 | - | – | |
| TMHMM | 199 | 221 | 23 | - | – | |
| Phobius | 216 | 246 | 31 | - | – | |
| TMHMM | 246 | 265 | 20 | - | – | |
| Phobius | 247 | 268 | 22 | - | – | |
| Phobius | 269 | 274 | 6 | - | – | |
| TMHMM | 275 | 297 | 23 | - | – | |
| Phobius | 275 | 296 | 22 | - | – | |
| Phobius | 297 | 332 | 36 | - | – | |
| TMHMM | 332 | 354 | 23 | - | – | |
| Phobius | 333 | 355 | 23 | - | – | |
| Phobius | 356 | 366 | 11 | - | – | |
| Phobius | 367 | 387 | 21 | - | – | |
| TMHMM | 369 | 391 | 23 | - | – | |
| Phobius | 388 | 406 | 19 | - | – | |
| TMHMM | 403 | 422 | 20 | - | – | |
| Phobius | 407 | 425 | 19 | - | – | |
| Phobius | 426 | 431 | 6 | - | – | |
| TMHMM | 432 | 454 | 23 | - | – | |
| Phobius | 432 | 454 | 23 | - | – | |
| Phobius | 455 | 465 | 11 | - | – | |
| Phobius | 466 | 489 | 24 | - | – | |
| TMHMM | 467 | 489 | 23 | - | – | |
| Phobius | 490 | 649 | 160 | - | – | |
| Gene3D | 497 | 643 | 147 | 4.4E-41 | ||
| ProSiteProfiles | 517 | 640 | 124 | 28.26 | ||
| Pfam | 518 | 636 | 119 | 1.3E-31 | ||
| CDD | 518 | 633 | 116 | 1.6996E-26 | – | |
| SUPERFAMILY | 519 | 641 | 123 | 1.96E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Secondary active sulfate transmembrane transporter activity | Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
| Biological process | Sulfate transport | The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Sulfate transmembrane transporter activity | Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0246500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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