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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0252100 |
| Transcript ID | LotjaGi1g1v0252100.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|A0A072VQ91|A0A072VQ91_MEDTR Branched-chain-amino-acid aminotransferase-like protein; Found in the gene: LotjaGi1g1v0252100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:60497764..60499875) extracted from Lotus japonicus Gifu genome v1.2.
AGTATAAAGGATAAAAAATTATTTTTAATTAGCTAATTTTTTTATTGTCATGTTATATCTTATAATTTTAAAATCCATTG TATTTACTATCCATATCTATATTAGTATCATATCAGACTATTAGTGTTCTTGCTGTTTAAATCAGCCATGTATTTAACAC ATTGAATTTTTCCTTTTTAAATTAAGGGAGGATCAAAAGATGAAAACTAGTTATTTTAAATATGCAACTTTGTTGTTACT AATGGTGTCTTTTCCCCATGTCTTTTGCATATATTAGGCCTATGAAAGGTTGAAAACTTTCAGAGAGAAGAAAAGTGGTA AACAACAATATCTTGCCATGTATTCTAGTATATTTGGCGGGATAACAACTGATCCAGCTGCTATGGTTATTCCAATGGAT GATCACATGGTTCACAGGGGCCACGGAGTCTTTGATACCGCAGCAATAATGGATGGGTTAGTAATTTACACCTCATGATG AAAACAACTCTTTCAGTCTGGATTGAATATCAGAAACATCTGTTGGGTGATAATTCCATGTTAAAAGAATTTTATATGTT GGTTAGTTTTATTTAATGAGTTATAGCTAGAGGTGCCTTTGATTGGTTTTAAACAAATGAAGGAAAATTAAAAAAGGATA AAGAAAGTTGAATCTTATATTGCAGAGAATTATGACCTTTGCATATGCACTTAAGCTTTTCAATCTCACAACATGGTTTT GAAGTATGATTGTTTACGATATCCTGAAATAGTGTCTAGTCTTATCTATTCCTATACTTTTGTTTTCTACTTTCTAAAGC TATCAAATGCTGTATTTTGTGTAGACACTTATACGAGCTAGATCAACACCTTGACCGCTTTTTAAGGTCGGCATCCAAGT CTGGAATTGATCCTCCATTTGACCGTGAAAGCGTACGCAAAATTCTCATACAAACAGTAAGTGCTTCCCAGTGTAGAAAA GGATCACTAAGGTATTGGCTCTCAGCAGGACCGGGTGACTTTCAACTATCTCCCTCTGGCTGCTACCAGTCGGTTCTTTA TGCAGTTGTCATACAAGACCTATCACTGGAACAGATTAAATCTAGGGGAGTTAAAGTCATCACTTCATCTGTCCCTATTA AACATCCCCAGTTCGCAACTACTAAGAGTGTGAATTACCTTCCAAATGTGCTCTCAAAGATGGAAGCTGAGGAAGTTGGC GCTTTTGCAGGCATTTGGCTTGATGATGAAGGTTTTGTTGCTGAAGGGCCTAATATGAATGTGGCTTTTGTCACTAAAGA GAAGGTACTCATAATGCCTTACTTTGACAAAATTCTAAGTGGCTGCACAGCTAAGAGAGTTTTGAGCCTTGCTGAGTGTT TGTTGAGGGAGGGCAAGGTTCAAAGGATAAAGACAAAAAATGTGACTGTTGAGGAAGGGAAGCAAGCAGATGAAATGATG CTGATTGGAAGTGGAGTTCTTGTTTGCCCTGTTGTGCAGTGGGATGAGCAGGTTATTGGAGATGGTGAGTACTTGTTTTA CTTCGACGAATGTATTCTTTTCGTGACTTGTTTTTATGTTTCTTAAAACTGCAACTAAGTTCTTTGATTCTCTCAAGTTT GCATCTGTTAAACTCTTAGTTTTACTGCTGGTTTGTTGTTGATAATATTGTTAATACGCATATTTACCTTGCTTTATCGA AACAAAAAGCTTTATCTCAAAAAAAATTATCAATTTGGTTCTTTTTTCCTTTGTGGTTAAAACCTCTTATCCAGAATGCT CACGATTTATTGTTTGGTCGAGGTCTTTTGTCATGTCATATTTGAATCATAAACAGTTTTGATTTTGCTTGTTTTTTTTA GTTGGTTACTTCCATTGTGCATTTCTTCTAGGTATATAAGACATTTTAACATGGACTATCTTGATTTATAGTTTGTTTGA GACATCAGAAACATGATATTGTTATCATTAACAGATTGAACGTTATATAATTTACGTATTTATGACCTGATTGATCTCAT TATGTCATTTCTTGTAGGCAAAGAAGGCCCTATAACTCAGGCTCTCTTAAATCTGATTGTTGAGGACATGAAATCAGGCC CCCCTACTGTTCGCACAGCTGTTCCTTATTGA
CDS sequence (LotjaGi1g1v0252100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTATTCTAGTATATTTGGCGGGATAACAACTGATCCAGCTGCTATGGTTATTCCAATGGATGATCACATGGTTCACAG GGGCCACGGAGTCTTTGATACCGCAGCAATAATGGATGGACACTTATACGAGCTAGATCAACACCTTGACCGCTTTTTAA GGTCGGCATCCAAGTCTGGAATTGATCCTCCATTTGACCGTGAAAGCGTACGCAAAATTCTCATACAAACAGTAAGTGCT TCCCAGTGTAGAAAAGGATCACTAAGGTATTGGCTCTCAGCAGGACCGGGTGACTTTCAACTATCTCCCTCTGGCTGCTA CCAGTCGGTTCTTTATGCAGTTGTCATACAAGACCTATCACTGGAACAGATTAAATCTAGGGGAGTTAAAGTCATCACTT CATCTGTCCCTATTAAACATCCCCAGTTCGCAACTACTAAGAGTGTGAATTACCTTCCAAATGTGCTCTCAAAGATGGAA GCTGAGGAAGTTGGCGCTTTTGCAGGCATTTGGCTTGATGATGAAGGTTTTGTTGCTGAAGGGCCTAATATGAATGTGGC TTTTGTCACTAAAGAGAAGGTACTCATAATGCCTTACTTTGACAAAATTCTAAGTGGCTGCACAGCTAAGAGAGTTTTGA GCCTTGCTGAGTGTTTGTTGAGGGAGGGCAAGGTTCAAAGGATAAAGACAAAAAATGTGACTGTTGAGGAAGGGAAGCAA GCAGATGAAATGATGCTGATTGGAAGTGGAGTTCTTGTTTGCCCTGTTGTGCAGTGGGATGAGCAGGTTATTGGAGATGG CAAAGAAGGCCCTATAACTCAGGCTCTCTTAAATCTGATTGTTGAGGACATGAAATCAGGCCCCCCTACTGTTCGCACAG CTGTTCCTTATTGA
Protein sequence (LotjaGi1g1v0252100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIMDGHLYELDQHLDRFLRSASKSGIDPPFDRESVRKILIQTVSA SQCRKGSLRYWLSAGPGDFQLSPSGCYQSVLYAVVIQDLSLEQIKSRGVKVITSSVPIKHPQFATTKSVNYLPNVLSKME AEEVGAFAGIWLDDEGFVAEGPNMNVAFVTKEKVLIMPYFDKILSGCTAKRVLSLAECLLREGKVQRIKTKNVTVEEGKQ ADEMMLIGSGVLVCPVVQWDEQVIGDGKEGPITQALLNLIVEDMKSGPPTVRTAVPY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 297 | 297 | 2.8E-137 | – | |
| PANTHER | 1 | 297 | 297 | 2.8E-137 | – | |
| Gene3D | 1 | 117 | 117 | 7.8E-31 | ||
| SUPERFAMILY | 6 | 286 | 281 | 2.35E-63 | ||
| CDD | 22 | 280 | 259 | 3.721E-68 | – | |
| Pfam | 30 | 258 | 229 | 2.9E-43 | ||
| Gene3D | 120 | 293 | 174 | 5.8E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi1g1v0252100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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