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IPR001544 is a Aminotransferase class IV.
<p>Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [[cite:PUB00002195]] into subfamilies.</p> <p>This entry represents a subfamily of aminotransferases, called class-IV, with currently consists of proteins of about 270 to 415 amino-acid residues that share a few regions of sequence similarity. Surprisingly, the best conserved region does not include the lysine residue to which the pyridoxal-phosphate group is known to be attached, in ilvE, but is located some 40 residues at the C terminus side of the pyridoxal-phosphate-lysine. The D-amino acid transferases (D-AAT), which are among the members of this entry, are required by bacteria to catalyse the synthesis of D-glutamic acid and D-alanine, which are essential constituents of bacterial cell wall and are the building block for other D-amino acids. Despite the difference in the structure of the substrates, D-AATs and L-ATTs have strong similarity [[cite:PUB00000425], [cite:PUB00002360]].</p> <p>Bifunctional aminodeoxychorismate lyase / D-amino acid transaminase from Mycobacterium tuberculosis (also referred to as Rv0812) is a bifunctional enzyme that catalyses two enzymatic reactions in biochemically unrelated pathways: acts as an aminodeoxychorismate (ADC) lyase (ADCL) in folate biosynthesis, converting 4-amino-4-deoxychorismate (ADC) to 4-aminobenzoate (PABA), and as a D-amino acid transaminase (DAAT) in peptidoglycan (PG) biosynthesis [[cite:PUB00151494]].</p> <p>This group also includes transaminase htyB from <i>Aspergillus rugulosus</i>, which is one of the enzymes required for the biosynthesis of the antifungal agent echinocandin B. HtyB catalyses the production of L-homotyrosine from the intermediate 2-oxo-4-(4-hydroxybenzyl)butanoic acid [[cite:PUB00088724]]. Also included in this group is branched-chain amino acid aminotransferase gloG from the yeast <i>Glarea lozoyensis</i>, which is required for biosynthesis of the mycotoxin pneumocandin, also a lipohexapeptide of the echinocandin family [[cite:PUB00089640]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Branched amino acid transaminase [Vigna unguiculata] gi|457866473|dbj|BAM93581.1| | 14 | ||
– | PREDICTED: LOW QUALITY PROTEIN: amino acid aminotransferase [Glycine max] gi|356504062|ref|XP_003520818.1| | 11 | ||
– | PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic-like [Glycine max] gi|356565786|ref|XP_003551118.1| | 8 | ||
– | PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic-like [Cicer arietinum] gi|502088132|ref|XP_004488745.1| | 9 | ||
– | PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic-like [Cicer arietinum] gi|502088132|ref|XP_004488745.1| | 9 | ||
– | PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Glycine max] gi|356510642|ref|XP_003524046.1| | 15 | ||
– | Branched amino acid transaminase [Vigna unguiculata] gi|457866473|dbj|BAM93581.1| | 14 | ||
– | PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502132704|ref|XP_004501489.1| | 9 | ||
– | Branched-chain-amino-acid aminotransferase [Medicago truncatula] gi|357482487|ref|XP_003611530.1| | 14 | ||
– | PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502142305|ref|XP_004504892.1| | 14 | ||
– | PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502142305|ref|XP_004504892.1| | 14 | ||
– | PREDICTED: LOW QUALITY PROTEIN: amino acid aminotransferase [Glycine max] gi|356504062|ref|XP_003520818.1| | 10 | ||
– | PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic-like [Glycine max] gi|356565786|ref|XP_003551118.1| | 6 | ||
– | D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein [Arabidopsis thaliana] gi|18410169|ref|NP_567011.1| | 7 | ||
– | D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein [Arabidopsis thaliana] gi|18410169|ref|NP_567011.1| | 7 | ||
– | D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein [Arabidopsis thaliana] gi|18410169|ref|NP_567011.1| | 7 | ||
– | Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|A0A072VQ91|A0A072VQ91_MEDTR Branched-chain-amino-acid aminotransferase-like protein; Found in the gene: LotjaGi1g1v0252100 | 11 | ||
– | Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|A0A072VQ91|A0A072VQ91_MEDTR Branched-chain-amino-acid aminotransferase-like protein; Found in the gene: LotjaGi1g1v0252100 | 11 | ||
– | Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|A0A072VQ91|A0A072VQ91_MEDTR Branched-chain-amino-acid aminotransferase-like protein; Found in the gene: LotjaGi1g1v0252100 | 11 | ||
– | Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|A0A072VQ91|A0A072VQ91_MEDTR Branched-chain-amino-acid aminotransferase-like protein; Found in the gene: LotjaGi1g1v0252100 | 11 | ||
– | Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 | 17 | ||
– | Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 | 18 | ||
– | Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V1K9|A0A072V1K9_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 | 17 | ||
– | Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V1K9|A0A072V1K9_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 | 17 | ||
– | Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 | 17 | ||
– | Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 | 18 | ||
– | Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V1K9|A0A072V1K9_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 | 17 | ||
– | Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364500 | 17 | ||
– | Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364500 | 16 | ||
– | Branched-chain-amino-acid aminotransferase; TAIR: AT3G49680.1 branched-chain aminotransferase 3; Swiss-Prot: sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic; TrEMBL-Plants: tr|I3S9H6|I3S9H6_LOTJA Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi2g1v0412400 | 17 | ||
– | Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|I3SWY2|I3SWY2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0156200 | 12 | ||
– | Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|I3SWY2|I3SWY2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0156200 | 12 | ||
– | Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|I3SWY2|I3SWY2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0156200 | 11 | ||
– | Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|I3SWY2|I3SWY2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0156200 | 12 | ||
– | Branched-chain-amino-acid aminotransferase; TAIR: AT1G50090.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7; TrEMBL-Plants: tr|A0A151SI87|A0A151SI87_CAJCA Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi4g1v0044400 | 17 | ||
– | Branched-chain-amino-acid aminotransferase; TAIR: AT1G50110.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6; TrEMBL-Plants: tr|A0A151SI87|A0A151SI87_CAJCA Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi4g1v0044400 | 17 | ||
– | Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G27410.2 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q9ASR4|BCAL2_ARATH Branched-chain-amino-acid aminotransferase-like protein 2; TrEMBL-Plants: tr|I1JRF2|I1JRF2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0218700 | 14 | ||
– | Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G27410.2 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q9ASR4|BCAL2_ARATH Branched-chain-amino-acid aminotransferase-like protein 2; TrEMBL-Plants: tr|I1JRF2|I1JRF2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0218700 | 14 | ||
– | Class IV aminotransferase; TAIR: AT3G54970.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|O14370|BCA1_SCHPO Branched-chain-amino-acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|A0A151U6X4|A0A151U6X4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0314100 | 8 | ||
– | Class IV aminotransferase; TAIR: AT3G54970.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|O14370|BCA1_SCHPO Branched-chain-amino-acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|A0A151U6X4|A0A151U6X4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0314100 | 8 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
cd00449 | CDD | 1 | 2.50 |