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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001544
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We have found 40 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.251s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0097809.1
n.a. branched amino acid transaminase [Vigna unguiculata] gi|457866473|dbj|BAM93581.1| chr0 41372969 41379192 +
4 domain predictions
1 GO term
Lj0g3v0177689.1
n.a. PREDICTED: LOW QUALITY PROTEIN: amino acid aminotransferase [Glycine max] gi|356504062|ref|XP_003520818.1| chr0 86019141 86031042 -
4 domain predictions
1 GO term
Lj0g3v0249619.1
n.a. PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic-like [Glycine max] gi|356565786|ref|XP_003551118.1| chr0 129388395 129397483 +
4 domain predictions
1 GO term
Lj0g3v0296059.1
n.a. PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic-like [Cicer arietinum] gi|502088132|ref|XP_004488745.1| chr0 153846927 153849771 +
4 domain predictions
1 GO term
Lj0g3v0296059.2
n.a. PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic-like [Cicer arietinum] gi|502088132|ref|XP_004488745.1| chr0 153846927 153849771 +
4 domain predictions
1 GO term
Lj0g3v0334729.1
n.a. PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Glycine max] gi|356510642|ref|XP_003524046.1| chr0 175245986 175250863 +
4 domain predictions
1 GO term
Lj0g3v0334729.2
n.a. branched amino acid transaminase [Vigna unguiculata] gi|457866473|dbj|BAM93581.1| chr0 175247137 175250863 +
4 domain predictions
1 GO term
Lj0g3v0334729.3
n.a. PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502132704|ref|XP_004501489.1| chr0 175247356 175250863 +
4 domain predictions
1 GO term
Lj2g3v1983990.1
n.a. Branched-chain-amino-acid aminotransferase [Medicago truncatula] gi|357482487|ref|XP_003611530.1| chr2 28891316 28897266 -
4 domain predictions
1 GO term
Lj4g3v0412790.1
n.a. PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502142305|ref|XP_004504892.1| chr4 5440131 5451484 -
4 domain predictions
1 GO term
Lj4g3v0412790.2
n.a. PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502142305|ref|XP_004504892.1| chr4 5440131 5457253 -
4 domain predictions
1 GO term
Lj5g3v1452270.1
n.a. PREDICTED: LOW QUALITY PROTEIN: amino acid aminotransferase [Glycine max] gi|356504062|ref|XP_003520818.1| chr5 21468291 21480190 +
4 domain predictions
1 GO term
Lj5g3v1951970.1
n.a. PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic-like [Glycine max] gi|356565786|ref|XP_003551118.1| chr5 27574975 27575277 +
4 domain predictions
1 GO term
Lj5g3v2046120.2
n.a. D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein [Arabidopsis thaliana] gi|18410169|ref|NP_567011.1| chr5 29491853 29497842 -
4 domain predictions
1 GO term
Lj5g3v2046120.3
n.a. D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein [Arabidopsis thaliana] gi|18410169|ref|NP_567011.1| chr5 29491853 29497842 -
4 domain predictions
1 GO term
Lj5g3v2046120.4
n.a. D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein [Arabidopsis thaliana] gi|18410169|ref|NP_567011.1| chr5 29491853 29497842 -
4 domain predictions
1 GO term
LotjaGi1g1v0252100.1
n.a. Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|A0A072VQ91|A0A072VQ91_MEDTR Branched-chain-amino-acid aminotransferase-like protein; Found in the gene: LotjaGi1g1v0252100 LjG1.1_chr1 60496891 60506761 -
2 domain predictions
1 GO term
LotjaGi1g1v0252100.2
n.a. Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|A0A072VQ91|A0A072VQ91_MEDTR Branched-chain-amino-acid aminotransferase-like protein; Found in the gene: LotjaGi1g1v0252100 LjG1.1_chr1 60497050 60506690 -
2 domain predictions
1 GO term
LotjaGi1g1v0252100.3
n.a. Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|A0A072VQ91|A0A072VQ91_MEDTR Branched-chain-amino-acid aminotransferase-like protein; Found in the gene: LotjaGi1g1v0252100 LjG1.1_chr1 60497063 60506856 -
2 domain predictions
1 GO term
LotjaGi1g1v0252100.4
n.a. Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|A0A072VQ91|A0A072VQ91_MEDTR Branched-chain-amino-acid aminotransferase-like protein; Found in the gene: LotjaGi1g1v0252100 LjG1.1_chr1 60497764 60499875 -
2 domain predictions
1 GO term
LotjaGi1g1v0364300.1
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 LjG1.1_chr1 84027691 84034012 -
2 domain predictions
1 GO term
LotjaGi1g1v0364300.2
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 LjG1.1_chr1 84027691 84034987 -
2 domain predictions
1 GO term
LotjaGi1g1v0364300.3
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V1K9|A0A072V1K9_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 LjG1.1_chr1 84029051 84034006 -
2 domain predictions
1 GO term
LotjaGi1g1v0364300.4
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V1K9|A0A072V1K9_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 LjG1.1_chr1 84029778 84032784 -
2 domain predictions
1 GO term
LotjaGi1g1v0364300.5
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 LjG1.1_chr1 84029778 84033127 -
2 domain predictions
1 GO term
LotjaGi1g1v0364300.6
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 LjG1.1_chr1 84029778 84034768 -
2 domain predictions
1 GO term
LotjaGi1g1v0364300.7
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V1K9|A0A072V1K9_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364300 LjG1.1_chr1 84029778 84034768 -
2 domain predictions
1 GO term
LotjaGi1g1v0364500.1
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364500 LjG1.1_chr1 84067303 84091043 -
2 domain predictions
1 GO term
LotjaGi1g1v0364500.2
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G10070.1 branched-chain amino acid transaminase 2; Swiss-Prot: sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A072V3G0|A0A072V3G0_MEDTR Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi1g1v0364500 LjG1.1_chr1 84069184 84074731 -
2 domain predictions
1 GO term
LotjaGi2g1v0412400.1
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT3G49680.1 branched-chain aminotransferase 3; Swiss-Prot: sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic; TrEMBL-Plants: tr|I3S9H6|I3S9H6_LOTJA Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi2g1v0412400 LjG1.1_chr2 90932364 90938724 -
2 domain predictions
1 GO term
LotjaGi3g1v0156200.1
n.a. Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|I3SWY2|I3SWY2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0156200 LjG1.1_chr3 21320591 21329407 +
2 domain predictions
1 GO term
LotjaGi3g1v0156200.2
n.a. Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|I3SWY2|I3SWY2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0156200 LjG1.1_chr3 21320591 21329407 +
2 domain predictions
1 GO term
LotjaGi3g1v0156200.3
n.a. Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|I3SWY2|I3SWY2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0156200 LjG1.1_chr3 21321237 21323173 +
2 domain predictions
1 GO term
LotjaGi3g1v0156200.4
n.a. Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G57850.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q8L493|DAAA_ARATH D-amino-acid transaminase, chloroplastic; TrEMBL-Plants: tr|I3SWY2|I3SWY2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0156200 LjG1.1_chr3 21321237 21323176 +
2 domain predictions
1 GO term
LotjaGi4g1v0044400.1
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G50090.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7; TrEMBL-Plants: tr|A0A151SI87|A0A151SI87_CAJCA Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi4g1v0044400 LjG1.1_chr4 5235187 5247016 -
2 domain predictions
1 GO term
LotjaGi4g1v0044400.2
n.a. Branched-chain-amino-acid aminotransferase; TAIR: AT1G50110.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6; TrEMBL-Plants: tr|A0A151SI87|A0A151SI87_CAJCA Branched-chain-amino-acid aminotransferase; Found in the gene: LotjaGi4g1v0044400 LjG1.1_chr4 5235195 5243157 -
2 domain predictions
1 GO term
LotjaGi5g1v0218700.1
n.a. Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G27410.2 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q9ASR4|BCAL2_ARATH Branched-chain-amino-acid aminotransferase-like protein 2; TrEMBL-Plants: tr|I1JRF2|I1JRF2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0218700 LjG1.1_chr5 52474660 52493149 +
2 domain predictions
1 GO term
LotjaGi5g1v0218700.2
n.a. Branched-chain-amino-acid aminotransferase-like protein; TAIR: AT5G27410.2 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|Q9ASR4|BCAL2_ARATH Branched-chain-amino-acid aminotransferase-like protein 2; TrEMBL-Plants: tr|I1JRF2|I1JRF2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0218700 LjG1.1_chr5 52480453 52492006 +
2 domain predictions
1 GO term
LotjaGi5g1v0314100.1
n.a. Class IV aminotransferase; TAIR: AT3G54970.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|O14370|BCA1_SCHPO Branched-chain-amino-acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|A0A151U6X4|A0A151U6X4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0314100 LjG1.1_chr5 63239654 63246047 -
2 domain predictions
1 GO term
LotjaGi5g1v0314100.2
n.a. Class IV aminotransferase; TAIR: AT3G54970.1 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; Swiss-Prot: sp|O14370|BCA1_SCHPO Branched-chain-amino-acid aminotransferase, mitochondrial; TrEMBL-Plants: tr|A0A151U6X4|A0A151U6X4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0314100 LjG1.1_chr5 63239783 63246025 -
2 domain predictions
1 GO term